Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TNNI1

Gene Name Gene ID Reads Annotation
TNNI1 ENSGALG00000000313 4069 troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]











Genes with expression patterns similar to TNNI1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNNI1 ENSGALG00000000313 4069 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
2. ACTC1 ENSGALG00000009844 20914 6.767 0.895 0.904 0.864 0.739 0.804 0.897 - - 0.854 0.810 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. TNNC2 ENSGALG00000006835 2963 4.816 0.771 0.939 0.824 - 0.725 0.772 - - 0.785 - troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
4. gga-mir-7474 ENSGALG00000033766 5727 3.921 0.874 - 0.740 0.711 0.815 - - - 0.781 - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
5. MYL3 ENSGALG00000005448 3379 3.856 0.823 0.760 0.816 - 0.718 - - - 0.739 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
6. EN1 ENSGALG00000042389 3051 3.271 - - 0.795 - 0.724 0.909 - - 0.843 - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
7. RBM24 ENSGALG00000012712 4138 3.259 0.828 - 0.760 - 0.798 0.873 - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
8. C1QTNF3 ENSGALG00000027887 8646 3.019 - 0.738 0.803 - 0.763 0.715 - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
9. MYF5 ENSGALG00000028091 1965 2.52 - 0.885 0.842 - - 0.793 - - - - myogenic factor 5 [Source:NCBI gene;Acc:395633]
10. MYL2_1 ENSGALG00000004582 2367 2.488 - 0.807 0.815 - - - - - 0.866 - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
11. KLHL31 ENSGALG00000016309 1518 2.395 0.814 - 0.771 - - - - - 0.810 - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
12. MYL1 ENSGALG00000002907 1300 2.393 0.757 - 0.880 - - - - - 0.756 - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
13. TNNT3 ENSGALG00000006572 1652 2.387 - 0.865 0.805 - 0.717 - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
14. MYF6 ENSGALG00000010936 1143 2.353 - 0.836 - - - 0.743 - - 0.774 - myogenic factor 6 [Source:NCBI gene;Acc:417873]
15. TRIM55 ENSGALG00000041327 1097 2.352 0.799 0.776 0.777 - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
16. HSPB8 ENSGALG00000007383 5333 2.272 - - 0.777 - 0.749 0.746 - - - - heat shock protein family B (small) member 8 [Source:HGNC Symbol;Acc:HGNC:30171]
17. TPM1 ENSGALG00000003521 11894 2.245 0.826 - - 0.700 0.719 - - - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
18. MYOZ2 ENSGALG00000011991 714 2.233 0.767 - - - 0.721 - - - 0.745 - myozenin 2 [Source:NCBI gene;Acc:422682]
19. XIRP1 ENSGALG00000006025 729 2.169 0.712 - - - 0.729 - - - 0.728 - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
20. UNC45B ENSGALG00000002186 399 1.689 0.772 - - - - 0.917 - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
21. HSPB2 ENSGALG00000040842 197 1.648 0.853 - - - - - - - 0.795 - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
22. ACTA1 ENSGALG00000011086 2543 1.644 0.822 - 0.822 - - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
23. MYOD1 ENSGALG00000006216 568 1.635 - - - - - 0.928 - - 0.707 - myogenic differentiation 1 [Source:NCBI gene;Acc:374048]
24. GGMOXR1 GGMOXR1 6734 1.592 - - 0.796 - 0.796 - - - - -
25. MYL2 ENSGALG00000004582 2245 1.576 0.847 - 0.729 - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
26. TCF15 ENSGALG00000026276 3646 1.568 - - 0.866 - 0.702 - - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
27. MYH15 ENSGALG00000015358 6304 1.555 0.787 - - - - - - - 0.768 - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
28. NGFR ENSGALG00000035950 13452 1.546 - 0.780 0.766 - - - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
29. ACTN2 ENSGALG00000014463 1724 1.546 0.829 - - - - - - - 0.717 - actinin alpha 2 [Source:NCBI gene;Acc:396263]
30. MEOX2 ENSGALG00000010794 1556 1.522 - - 0.770 - 0.752 - - - - - mesenchyme homeobox 2 [Source:NCBI gene;Acc:374137]
31. TMEM182 ENSGALG00000038936 274 1.522 - - 0.777 - 0.745 - - - - - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
32. RGMA ENSGALG00000039173 12874 1.51 - - 0.734 - - 0.776 - - - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
33. SMOC1 ENSGALG00000009415 2403 1.508 - - 0.753 - - - - - - 0.755 SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
34. CRIP1 ENSGALG00000002771 4270 1.503 - 0.773 0.730 - - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
35. HPCAL1 ENSGALG00000016443 6633 1.498 - - 0.763 - - 0.735 - - - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
36. TNNI2 ENSGALG00000006591 690 1.487 - 0.770 0.717 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
37. CYP1B1 ENSGALG00000025822 3143 1.477 - - 0.729 0.748 - - - - - - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
38. BHMT ENSGALG00000004518 4700 1.469 - 0.716 - - - 0.753 - - - - betaine--homocysteine S-methyltransferase
39. PKD2L2 ENSGALG00000006120 592 1.446 - - 0.715 - 0.731 - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
40. FXYD6 ENSGALG00000025937 4073 1.442 0.727 0.715 - - - - - - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
41. ENSGALG00000026802 ENSGALG00000026802 14688 1.415 - - - - - 0.712 - - - 0.703
42. SAMHD1 ENSGALG00000001231 5218 1 - - - - - - 1.000 - - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
43. CARHSP1 ENSGALG00000042981 6920 1 - - - - - - 1.000 - - - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
44. MED10 ENSGALG00000028336 9343 1 - - - - - - 1.000 - - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
45. NUP214 ENSGALG00000041111 4902 1 - - - - - - 1.000 - - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
46. REPS1 ENSGALG00000013829 2271 1 - - - - - - 1.000 - - - RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
47. CENPL ENSGALG00000038411 4867 1 - - - - - - 1.000 - - - centromere protein L [Source:NCBI gene;Acc:426563]
48. HDHD2 ENSGALG00000034801 6373 1 - - - - - - 1.000 - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
49. NEIL1 ENSGALG00000001586 2292 1 - - - - - - 1.000 - - - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
50. WRN ENSGALG00000040909 3645 1 - - - - - - 1.000 - - - Werner syndrome RecQ like helicase [Source:NCBI gene;Acc:422505]
51. DOHH ENSGALG00000017524 9420 1 - - - - - - 1.000 - - - deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
52. TAF13 ENSGALG00000015185 11410 1 - - - - - - 1.000 - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
53. FANCE ENSGALG00000002561 3532 1 - - - - - - 1.000 - - - Fanconi anemia complementation group E
54. ENSGALG00000006278 ENSGALG00000006278 202 0.999 - - - - - - - 0.999 - -
55. KIF1A ENSGALG00000006221 1989 0.999 - - - - - - - 0.999 - - kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
56. EFR3B ENSGALG00000016605 234 0.999 - - - - - - - 0.999 - - EFR3 homolog B [Source:HGNC Symbol;Acc:HGNC:29155]
57. HAUS6 ENSGALG00000015091 9671 0.999 - - - - - - 0.999 - - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
58. FAXDC2 ENSGALG00000003972 172 0.999 - - - - - - - 0.999 - - fatty acid hydroxylase domain containing 2 [Source:NCBI gene;Acc:416256]
59. ARHGEF18 ENSGALG00000003572 224 0.999 - - - - - - - 0.999 - - Rho/Rac guanine nucleotide exchange factor 18, transcript variant X1
60. SYNM ENSGALG00000007048 705 0.999 - - - - - - - 0.999 - - synemin [Source:NCBI gene;Acc:395599]
61. MKKS ENSGALG00000009013 9301 0.999 - - - - - - 0.999 - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
62. CDH5 ENSGALG00000032349 8526 0.999 - - - - - - 0.999 - - - cadherin 5 [Source:NCBI gene;Acc:374068]
63. GMPS ENSGALG00000010284 8765 0.999 - - - - - - 0.999 - - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
64. MRPL51 ENSGALG00000014435 29348 0.998 - - - - - - 0.998 - - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
65. SEC13 ENSGALG00000008419 18388 0.998 - - - - - - 0.998 - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
66. MRPS25 ENSGALG00000008506 12131 0.998 - - - - - - 0.998 - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
67. WDR1 ENSGALG00000014957 15700 0.998 - - - - - - 0.998 - - - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
68. CCDC15 1759 0.998 - - - - - - - 0.998 - - coiled-coil domain containing 15
69. CDCA3 ENSGALG00000014513 17047 0.998 - - - - - - 0.998 - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
70. ADAMTS6 ENSGALG00000014751 1293 0.997 - - - - - - - 0.997 - - ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]
71. RAC2 ENSGALG00000012456 987 0.997 - - - - - - - 0.997 - - Rac family small GTPase 2 [Source:NCBI gene;Acc:418044]
72. KCNK2 ENSGALG00000009687 1552 0.997 - - - - - - - 0.997 - - potassium two pore domain channel subfamily K member 2 [Source:HGNC Symbol;Acc:HGNC:6277]
73. FSBP 3152 0.997 - - - - - - - 0.997 - - fibrinogen silencer binding protein
74. CNPY3 ENSGALG00000028471 1413 0.997 - - - - - - - 0.997 - - canopy FGF signaling regulator 3 [Source:HGNC Symbol;Acc:HGNC:11968]
75. MIEN1 ENSGALG00000026328 3396 0.996 - - - - - - - 0.996 - - migration and invasion enhancer 1 [Source:HGNC Symbol;Acc:HGNC:28230]
76. NEO1 ENSGALG00000001774 10165 0.996 - - - - - - - 0.996 - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
77. TMEM200C ENSGALG00000030210 1434 0.996 - - - - - - - 0.996 - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
78. ENSGALG00000002852 ENSGALG00000002852 2687 0.995 - - - - - - - 0.995 - -
79. PRDM6 ENSGALG00000005351 2078 0.995 - - - - - - - 0.995 - - PR/SET domain 6 [Source:HGNC Symbol;Acc:HGNC:9350]
80. DIMT1 ENSGALG00000020569 5150 0.995 - - - - - - - 0.995 - - DIM1 dimethyladenosine transferase 1 homolog [Source:HGNC Symbol;Acc:HGNC:30217]
81. RAD52 ENSGALG00000039171 6989 0.995 - - - - - - - 0.995 - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
82. UBP1 ENSGALG00000035630 13359 0.995 - - - - - - 0.995 - - - upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
83. PSMA3 ENSGALG00000012039 26539 0.994 - - - - - - 0.994 - - - proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
84. RAB20 ENSGALG00000016844 3250 0.994 - - - - - - - 0.994 - - RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
85. PIGB ENSGALG00000037734 2193 0.992 - - - - - - - 0.992 - - phosphatidylinositol glycan anchor biosynthesis class B [Source:HGNC Symbol;Acc:HGNC:8959]
86. SDOS SDOS 66125 0.992 - - - - - - 0.992 - - -
87. ARPC3 ENSGALG00000003820 29128 0.991 - - - - - - 0.991 - - - actin related protein 2/3 complex subunit 3 [Source:NCBI gene;Acc:416837]
88. SFXN1 ENSGALG00000033956 2713 0.991 - - - - - - - 0.991 - - sideroflexin 1 [Source:NCBI gene;Acc:416221]
89. SIRT6 ENSGALG00000001245 3716 0.99 - - - - - - - 0.990 - - sirtuin 6 [Source:NCBI gene;Acc:428332]
90. DDT ENSGALG00000006350 16117 0.99 - - - - - - 0.990 - - - D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
91. TEX10 ENSGALG00000013438 3121 0.99 - - - - - - - 0.990 - - testis expressed 10 [Source:NCBI gene;Acc:420993]
92. TMEM26 ENSGALG00000025862 2222 0.989 - - - - - - - 0.989 - - transmembrane protein 26 [Source:NCBI gene;Acc:423663]
93. ATP11B ENSGALG00000008839 3455 0.987 - - - - - - - 0.987 - - ATPase phospholipid transporting 11B (putative), transcript variant X3
94. GLCCI1 ENSGALG00000035239 22149 0.986 - - - - - - 0.986 - - - glucocorticoid induced 1 [Source:NCBI gene;Acc:420580]
95. SULF1 ENSGALG00000039553 5115 0.986 - - - - - - - 0.986 - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
96. DEPDC1B ENSGALG00000014729 5334 0.985 - - - - - - - 0.985 - - DEP domain containing 1B [Source:NCBI gene;Acc:427152]
97. ZCCHC10 ENSGALG00000036666 5148 0.985 - - - - - - - 0.985 - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
98. MRPL32 ENSGALG00000037258 6861 0.985 - - - - - - - 0.985 - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
99. IVD ENSGALG00000040267 5820 0.983 - - - - - - - 0.983 - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
100. MTFR2 ENSGALG00000019967 4436 0.983 - - - - - - - 0.983 - - mitochondrial fission regulator 2, transcript variant X1

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA