Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TNNC2

Gene Name Gene ID Reads Annotation
TNNC2 ENSGALG00000006835 2963 troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]











Genes with expression patterns similar to TNNC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNNC2 ENSGALG00000006835 2963 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
2. ACTC1 ENSGALG00000009844 20914 6.594 0.719 0.928 0.928 0.813 0.809 0.822 - - 0.866 0.709 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. TNNI1 ENSGALG00000000313 4069 4.816 0.771 0.939 0.824 - 0.725 0.772 - - 0.785 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
4. C1QTNF3 ENSGALG00000027887 8646 4.06 - 0.763 0.868 0.767 0.850 - - - 0.812 - C1q and tumor necrosis factor related protein 3, transcript variant X1
5. TPM1 ENSGALG00000003521 11894 3.97 0.818 - 0.822 0.800 0.799 - - - 0.731 - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
6. gga-mir-7474 ENSGALG00000033766 5727 3.924 - 0.701 0.795 0.788 0.833 - - - 0.807 - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
7. RBM24 ENSGALG00000012712 4138 3.83 - - 0.707 - 0.800 0.835 - - 0.762 0.726 RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
8. MYL2_1 ENSGALG00000004582 2367 3.311 - 0.792 0.813 - - - - - 0.856 0.850 myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
9. KLHL31 ENSGALG00000016309 1518 3.125 - - 0.787 - 0.761 0.856 - - 0.721 - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
10. EN1 ENSGALG00000042389 3051 3.125 - - 0.823 0.703 0.802 0.797 - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
11. MYL1 ENSGALG00000002907 1300 3.123 - - 0.849 0.755 0.753 - - - 0.766 - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
12. TMEM182 ENSGALG00000038936 274 3.021 - - 0.779 0.787 0.736 - - - 0.719 - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
13. ACTA1 ENSGALG00000011086 2543 2.987 0.728 - 0.840 0.718 0.701 - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
14. MYF5 ENSGALG00000028091 1965 2.508 - 0.922 0.800 - - - - - 0.786 - myogenic factor 5 [Source:NCBI gene;Acc:395633]
15. TNNT3 ENSGALG00000006572 1652 2.464 - 0.896 0.839 0.729 - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
16. TRIM55 ENSGALG00000041327 1097 2.34 - 0.767 0.821 - - - - - 0.752 - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
17. GGMOXR1 GGMOXR1 6734 2.33 - - 0.750 - 0.804 - - - 0.776 -
18. ENSGALG00000010113 ENSGALG00000010113 508 2.3 - - 0.766 0.776 - - - - 0.758 -
19. BHMT ENSGALG00000004518 4700 2.277 0.756 0.718 0.803 - - - - - - - betaine--homocysteine S-methyltransferase
20. SOX9 ENSGALG00000004386 14802 2.25 - - 0.705 - 0.726 - - - 0.819 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
21. LECT1 LECT1 12694 2.24 - - 0.720 - 0.743 - - - 0.777 -
22. PAX1 ENSGALG00000039040 3339 2.198 - - 0.747 0.717 0.734 - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
23. XIRP1 ENSGALG00000006025 729 2.136 - - - 0.713 0.704 - - - 0.719 - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
24. CD109 ENSGALG00000015910 11 1.92 - - - - - 0.920 - 1.000 - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
25. MYL3 ENSGALG00000005448 3379 1.685 - - 0.871 - - - - - 0.814 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
26. UNC45B ENSGALG00000002186 399 1.625 - - - - 0.717 0.908 - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
27. MYF6 ENSGALG00000010936 1143 1.615 - 0.826 - - - - - - 0.789 - myogenic factor 6 [Source:NCBI gene;Acc:417873]
28. CBX7 ENSGALG00000041236 14 1.612 - - - - - 0.823 - 0.789 - - chromobox 7 [Source:HGNC Symbol;Acc:HGNC:1557]
29. ACTN2 ENSGALG00000014463 1724 1.584 - - 0.738 - - - - - 0.846 - actinin alpha 2 [Source:NCBI gene;Acc:396263]
30. MYBPC1 ENSGALG00000012783 317 1.583 - - 0.815 0.768 - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
31. TNNI2 ENSGALG00000006591 690 1.571 - 0.770 0.801 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
32. PKD2L2 ENSGALG00000006120 592 1.569 - - 0.786 - 0.783 - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
33. SMOC1 ENSGALG00000009415 2403 1.556 - - 0.787 - - - - - 0.769 - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
34. TCF15 ENSGALG00000026276 3646 1.526 - - 0.803 - - - - - 0.723 - transcription factor 15 [Source:NCBI gene;Acc:395788]
35. CRIP1 ENSGALG00000002771 4270 1.522 - 0.780 0.742 - - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
36. TMEM47 ENSGALG00000027198 3619 1.5 - - 0.726 - - - - - 0.774 - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
37. CYP1B1 ENSGALG00000025822 3143 1.492 - - 0.724 - - - - - 0.768 - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
38. AMPD1 ENSGALG00000002082 228 1.468 - - 0.752 - - - - - 0.716 - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
39. EMILIN3 ENSGALG00000030012 6200 1.458 - - - - 0.709 - - - 0.749 - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
40. PTPRF ENSGALG00000010053 27 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
41. UNC5D ENSGALG00000001608 4 1 - - - - - - - 1.000 - - unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
42. GKN2 ENSGALG00000039187 173 1 - - - - - - - 1.000 - - gastrokine 2 [Source:HGNC Symbol;Acc:HGNC:24588]
43. TLR15 ENSGALG00000008166 29 1 - - - - - - - 1.000 - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
44. ENSGALG00000011933 ENSGALG00000011933 1 1 - - - - - - - 1.000 - -
45. CCDC13 ENSGALG00000005303 13 1 - - - - - - - 1.000 - - coiled-coil domain containing 13, transcript variant X3
46. CRISPLD1 ENSGALG00000033880 64 1 - - - - - - - 1.000 - - cysteine rich secretory protein LCCL domain containing 1 [Source:NCBI gene;Acc:395369]
47. PNMT ENSGALG00000027281 14 1 - - - - - - - 1.000 - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
48. ENSGALG00000018431 ENSGALG00000018431 2 1 - - - - - - - 1.000 - -
49. CDKN1AL ENSGALG00000026896 0 1 - - - - - - - 1.000 - - cyclin dependent kinase inhibitor 1A-like, transcript variant X5
50. RNP ENSGALG00000028991 10 1 - - - - - - - 1.000 - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
51. SMOX ENSGALG00000015977 18 1 - - - - - - - 1.000 - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
52. GALR GALR 17 1 - - - - - - - 1.000 - -
53. FAM83C ENSGALG00000031906 1 1 - - - - - - - 1.000 - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
54. TRDN ENSGALG00000014848 130 1 - - - - - - - 1.000 - - triadin
55. SNORA33 SNORA33 11 1 - - - - - - - 1.000 - -
56. ATP13A4 ENSGALG00000020827 0 1 - - - - - - - 1.000 - - ATPase 13A4 [Source:NCBI gene;Acc:424901]
57. FAM46C 13 1 - - - - - - - 1.000 - - family with sequence similarity 46 member C
58. SNORD74 SNORD74 0 1 - - - - - - - 1.000 - -
59. GFM2 ENSGALG00000014939 26 1 - - - - - - - 1.000 - - G elongation factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]
60. TLDC2 ENSGALG00000029033 6 1 - - - - - - - 1.000 - - TBC/LysM-associated domain containing 2, transcript variant X2
61. OCM ENSGALG00000003462 6 1 - - - - - - - 1.000 - - oncomodulin [Source:NCBI gene;Acc:386586]
62. SLC26A2 ENSGALG00000001239 3 1 - - - - - - - 1.000 - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
63. AMZ1 ENSGALG00000004358 2 1 - - - - - - - 1.000 - - archaelysin family metallopeptidase 1
64. TMEM161B ENSGALG00000010896 36 1 - - - - - - - 1.000 - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
65. IQSEC1 ENSGALG00000005042 24 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
66. CCDC180 109 0.986 - - - - - - - 0.986 - - coiled-coil domain containing 180
67. CRK ENSGALG00000002656 15 0.986 - - - - - - - 0.986 - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
68. SLC24A2 ENSGALG00000015080 54 0.986 - - - - - - - 0.986 - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
69. RASD1 ENSGALG00000004860 133 0.985 - - - - - - - 0.985 - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
70. TSPAN18 ENSGALG00000036901 14 0.961 - - - - - 0.961 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
71. CLN5 ENSGALG00000016917 386 0.942 - - - - - - - 0.942 - - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
72. FBXO18 35 0.942 - - - - - - - 0.942 - - F-box protein, helicase, 18, transcript variant X4
73. TMEM8C ENSGALG00000021520 30 0.935 - - - - - 0.935 - - - - Gallus gallus transmembrane protein 8C (TMEM8C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318457]
74. ENSGALG00000020349 ENSGALG00000020349 10 0.935 - - - - - 0.935 - - - -
75. TRH ENSGALG00000008490 16 0.935 - - - - - 0.935 - - - - thyrotropin releasing hormone [Source:NCBI gene;Acc:414344]
76. ST7L ENSGALG00000001538 5 0.935 - - - - - 0.935 - - - - suppression of tumorigenicity 7 like [Source:NCBI gene;Acc:395331]
77. TSSK3 4 0.935 - - - - - 0.935 - - - - testis specific serine kinase 3
78. TOX3 ENSGALG00000034649 54 0.935 - - - - - 0.935 - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
79. SLC26A11 ENSGALG00000007018 7 0.935 - - - - - 0.935 - - - - solute carrier family 26 member 11 [Source:HGNC Symbol;Acc:HGNC:14471]
80. NOXO1 ENSGALG00000005572 14 0.935 - - - - - 0.935 - - - - NADPH oxidase organizer 1 [Source:HGNC Symbol;Acc:HGNC:19404]
81. STK35 ENSGALG00000036219 0 0.935 - - - - - 0.935 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]
82. LOC100858814 ENSGALG00000028210 3 0.935 - - - - - 0.935 - - - - adenine phosphoribosyltransferase-like, transcript variant X1
83. BACE1 ENSGALG00000007298 3 0.935 - - - - - 0.935 - - - - beta-secretase 1 [Source:HGNC Symbol;Acc:HGNC:933]
84. BANK1 ENSGALG00000012292 17 0.935 - - - - - 0.935 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
85. OSTN ENSGALG00000007226 33 0.935 - - - - - 0.935 - - - - osteocrin [Source:NCBI gene;Acc:424907]
86. DIET1 DIET1 1 0.935 - - - - - 0.935 - - - -
87. SLCO4C1 ENSGALG00000026768 30 0.935 - - - - - 0.935 - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
88. COTL1 ENSGALG00000017644 81 0.935 - - - - - 0.935 - - - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
89. HMX2 ENSGALG00000030875 10 0.935 - - - - - 0.935 - - - - H6 family homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5018]
90. ENSGALG00000015321 ENSGALG00000015321 18 0.935 - - - - - 0.935 - - - -
91. TTC34 ENSGALG00000001081 8 0.935 - - - - - 0.935 - - - - tetratricopeptide repeat domain 34 [Source:HGNC Symbol;Acc:HGNC:34297]
92. ATP7B ENSGALG00000017021 7 0.935 - - - - - 0.935 - - - - ATPase copper transporting beta [Source:HGNC Symbol;Acc:HGNC:870]
93. gga-let-7i ENSGALG00000018237 2 0.935 - - - - - 0.935 - - - - gga-let-7i [Source:miRBase;Acc:MI0001168]
94. KCNC1 ENSGALG00000006220 15 0.935 - - - - - 0.935 - - - - potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]
95. PPFIA2 ENSGALG00000010958 27 0.935 - - - - - 0.935 - - - - PTPRF interacting protein alpha 2 [Source:HGNC Symbol;Acc:HGNC:9246]
96. DMP1 ENSGALG00000010927 5 0.935 - - - - - 0.935 - - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
97. SCARNA23 SCARNA23 2 0.935 - - - - - 0.935 - - - -
98. CHSY1 ENSGALG00000026468 4 0.935 - - - - - 0.935 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
99. KLHL23 ENSGALG00000020737 13 0.935 - - - - - 0.935 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
100. CCDC64 CCDC64 2 0.935 - - - - - 0.935 - - - -

There are 140 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA