Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TNNC2

Gene Name Gene ID Reads Annotation
TNNC2 ENSGALG00000006835 2963 troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]











Genes with expression patterns similar to TNNC2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNNC2 ENSGALG00000006835 2963 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin C2, fast skeletal type [Source:NCBI gene;Acc:396434]
2. ACTC1 ENSGALG00000009844 20914 6.594 0.719 0.928 0.928 0.813 0.809 0.822 - - 0.866 0.709 actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
3. TNNI1 ENSGALG00000000313 4069 4.816 0.771 0.939 0.824 - 0.725 0.772 - - 0.785 - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
4. C1QTNF3 ENSGALG00000027887 8646 4.06 - 0.763 0.868 0.767 0.850 - - - 0.812 - C1q and tumor necrosis factor related protein 3, transcript variant X1
5. TPM1 ENSGALG00000003521 11894 3.97 0.818 - 0.822 0.800 0.799 - - - 0.731 - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
6. gga-mir-7474 ENSGALG00000033766 5727 3.924 - 0.701 0.795 0.788 0.833 - - - 0.807 - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
7. RBM24 ENSGALG00000012712 4138 3.83 - - 0.707 - 0.800 0.835 - - 0.762 0.726 RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
8. MYL2_1 ENSGALG00000004582 2367 3.311 - 0.792 0.813 - - - - - 0.856 0.850 myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
9. EN1 ENSGALG00000042389 3051 3.125 - - 0.823 0.703 0.802 0.797 - - - - engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
10. KLHL31 ENSGALG00000016309 1518 3.125 - - 0.787 - 0.761 0.856 - - 0.721 - kelch like family member 31 [Source:HGNC Symbol;Acc:HGNC:21353]
11. MYL1 ENSGALG00000002907 1300 3.123 - - 0.849 0.755 0.753 - - - 0.766 - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
12. TMEM182 ENSGALG00000038936 274 3.021 - - 0.779 0.787 0.736 - - - 0.719 - transmembrane protein 182 [Source:HGNC Symbol;Acc:HGNC:26391]
13. ACTA1 ENSGALG00000011086 2543 2.987 0.728 - 0.840 0.718 0.701 - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
14. MYF5 ENSGALG00000028091 1965 2.508 - 0.922 0.800 - - - - - 0.786 - myogenic factor 5 [Source:NCBI gene;Acc:395633]
15. TNNT3 ENSGALG00000006572 1652 2.464 - 0.896 0.839 0.729 - - - - - - troponin T3, fast skeletal type [Source:NCBI gene;Acc:395761]
16. TRIM55 ENSGALG00000041327 1097 2.34 - 0.767 0.821 - - - - - 0.752 - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
17. GGMOXR1 GGMOXR1 6734 2.33 - - 0.750 - 0.804 - - - 0.776 -
18. ENSGALG00000010113 ENSGALG00000010113 508 2.3 - - 0.766 0.776 - - - - 0.758 -
19. BHMT ENSGALG00000004518 4700 2.277 0.756 0.718 0.803 - - - - - - - betaine--homocysteine S-methyltransferase
20. SOX9 ENSGALG00000004386 14802 2.25 - - 0.705 - 0.726 - - - 0.819 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
21. LECT1 LECT1 12694 2.24 - - 0.720 - 0.743 - - - 0.777 -
22. PAX1 ENSGALG00000039040 3339 2.198 - - 0.747 0.717 0.734 - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
23. XIRP1 ENSGALG00000006025 729 2.136 - - - 0.713 0.704 - - - 0.719 - xin actin binding repeat containing 1 [Source:NCBI gene;Acc:374266]
24. CD109 ENSGALG00000015910 11 1.92 - - - - - 0.920 - 1.000 - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
25. MYL3 ENSGALG00000005448 3379 1.685 - - 0.871 - - - - - 0.814 - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
26. UNC45B ENSGALG00000002186 399 1.625 - - - - 0.717 0.908 - - - - unc-45 myosin chaperone B [Source:HGNC Symbol;Acc:HGNC:14304]
27. MYF6 ENSGALG00000010936 1143 1.615 - 0.826 - - - - - - 0.789 - myogenic factor 6 [Source:NCBI gene;Acc:417873]
28. CBX7 ENSGALG00000041236 14 1.612 - - - - - 0.823 - 0.789 - - chromobox 7 [Source:HGNC Symbol;Acc:HGNC:1557]
29. ACTN2 ENSGALG00000014463 1724 1.584 - - 0.738 - - - - - 0.846 - actinin alpha 2 [Source:NCBI gene;Acc:396263]
30. MYBPC1 ENSGALG00000012783 317 1.583 - - 0.815 0.768 - - - - - - myosin binding protein C, slow type [Source:HGNC Symbol;Acc:HGNC:7549]
31. TNNI2 ENSGALG00000006591 690 1.571 - 0.770 0.801 - - - - - - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
32. PKD2L2 ENSGALG00000006120 592 1.569 - - 0.786 - 0.783 - - - - - polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
33. SMOC1 ENSGALG00000009415 2403 1.556 - - 0.787 - - - - - 0.769 - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
34. TCF15 ENSGALG00000026276 3646 1.526 - - 0.803 - - - - - 0.723 - transcription factor 15 [Source:NCBI gene;Acc:395788]
35. CRIP1 ENSGALG00000002771 4270 1.522 - 0.780 0.742 - - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
36. TMEM47 ENSGALG00000027198 3619 1.5 - - 0.726 - - - - - 0.774 - transmembrane protein 47 [Source:HGNC Symbol;Acc:HGNC:18515]
37. CYP1B1 ENSGALG00000025822 3143 1.492 - - 0.724 - - - - - 0.768 - cytochrome P450 family 1 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2597]
38. AMPD1 ENSGALG00000002082 228 1.468 - - 0.752 - - - - - 0.716 - adenosine monophosphate deaminase 1 [Source:HGNC Symbol;Acc:HGNC:468]
39. EMILIN3 ENSGALG00000030012 6200 1.458 - - - - 0.709 - - - 0.749 - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
40. FAM46C 13 1 - - - - - - - 1.000 - - family with sequence similarity 46 member C
41. ATP13A4 ENSGALG00000020827 0 1 - - - - - - - 1.000 - - ATPase 13A4 [Source:NCBI gene;Acc:424901]
42. IQSEC1 ENSGALG00000005042 24 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:HGNC:29112]
43. AMZ1 ENSGALG00000004358 2 1 - - - - - - - 1.000 - - archaelysin family metallopeptidase 1
44. SLC26A2 ENSGALG00000001239 3 1 - - - - - - - 1.000 - - solute carrier family 26 member 2 [Source:HGNC Symbol;Acc:HGNC:10994]
45. TMEM161B ENSGALG00000010896 36 1 - - - - - - - 1.000 - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
46. OCM ENSGALG00000003462 6 1 - - - - - - - 1.000 - - oncomodulin [Source:NCBI gene;Acc:386586]
47. SNORD74 SNORD74 0 1 - - - - - - - 1.000 - -
48. GFM2 ENSGALG00000014939 26 1 - - - - - - - 1.000 - - G elongation factor mitochondrial 2 [Source:HGNC Symbol;Acc:HGNC:29682]
49. TLDC2 ENSGALG00000029033 6 1 - - - - - - - 1.000 - - TBC/LysM-associated domain containing 2, transcript variant X2
50. TLR15 ENSGALG00000008166 29 1 - - - - - - - 1.000 - - Gallus gallus toll-like receptor 15 (TLR15), mRNA. [Source:RefSeq mRNA;Acc:NM_001037835]
51. UNC5D ENSGALG00000001608 4 1 - - - - - - - 1.000 - - unc-5 netrin receptor D [Source:HGNC Symbol;Acc:HGNC:18634]
52. GKN2 ENSGALG00000039187 173 1 - - - - - - - 1.000 - - gastrokine 2 [Source:HGNC Symbol;Acc:HGNC:24588]
53. PTPRF ENSGALG00000010053 27 1 - - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
54. TRDN ENSGALG00000014848 130 1 - - - - - - - 1.000 - - triadin
55. SNORA33 SNORA33 11 1 - - - - - - - 1.000 - -
56. GALR GALR 17 1 - - - - - - - 1.000 - -
57. FAM83C ENSGALG00000031906 1 1 - - - - - - - 1.000 - - family with sequence similarity 83 member C [Source:HGNC Symbol;Acc:HGNC:16121]
58. CDKN1AL ENSGALG00000026896 0 1 - - - - - - - 1.000 - - cyclin dependent kinase inhibitor 1A-like, transcript variant X5
59. RNP ENSGALG00000028991 10 1 - - - - - - - 1.000 - - renal natriuretic peptide [Source:NCBI gene;Acc:100526659]
60. ENSGALG00000018431 ENSGALG00000018431 2 1 - - - - - - - 1.000 - -
61. SMOX ENSGALG00000015977 18 1 - - - - - - - 1.000 - - spermine oxidase [Source:HGNC Symbol;Acc:HGNC:15862]
62. PNMT ENSGALG00000027281 14 1 - - - - - - - 1.000 - - phenylethanolamine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:9160]
63. ENSGALG00000011933 ENSGALG00000011933 1 1 - - - - - - - 1.000 - -
64. CCDC13 ENSGALG00000005303 13 1 - - - - - - - 1.000 - - coiled-coil domain containing 13, transcript variant X3
65. CRISPLD1 ENSGALG00000033880 64 1 - - - - - - - 1.000 - - cysteine rich secretory protein LCCL domain containing 1 [Source:NCBI gene;Acc:395369]
66. CRK ENSGALG00000002656 15 0.986 - - - - - - - 0.986 - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
67. SLC24A2 ENSGALG00000015080 54 0.986 - - - - - - - 0.986 - - solute carrier family 24 member 2 [Source:NCBI gene;Acc:414891]
68. CCDC180 109 0.986 - - - - - - - 0.986 - - coiled-coil domain containing 180
69. RASD1 ENSGALG00000004860 133 0.985 - - - - - - - 0.985 - - ras related dexamethasone induced 1 [Source:NCBI gene;Acc:416507]
70. TSPAN18 ENSGALG00000036901 14 0.961 - - - - - 0.961 - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
71. FBXO18 35 0.942 - - - - - - - 0.942 - - F-box protein, helicase, 18, transcript variant X4
72. CLN5 ENSGALG00000016917 386 0.942 - - - - - - - 0.942 - - CLN5, intracellular trafficking protein [Source:NCBI gene;Acc:101752092]
73. PAPPA ENSGALG00000007079 6 0.935 - - - - - 0.935 - - - - pappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]
74. P2RX3 ENSGALG00000040479 5 0.935 - - - - - 0.935 - - - - Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
75. GPR12 ENSGALG00000017102 4 0.935 - - - - - 0.935 - - - - G protein-coupled receptor 12 [Source:HGNC Symbol;Acc:HGNC:4466]
76. ENSGALG00000026368 ENSGALG00000026368 1 0.935 - - - - - 0.935 - - - -
77. ST6GALNAC3 ENSGALG00000009027 17 0.935 - - - - - 0.935 - - - - ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:19343]
78. SRRM3 ENSGALG00000001932 12 0.935 - - - - - 0.935 - - - - serine/arginine repetitive matrix 3 [Source:HGNC Symbol;Acc:HGNC:26729]
79. DDTNFR23 ENSGALG00000006407 4 0.935 - - - - - 0.935 - - - - death domain-containing tumor necrosis factor receptor superfamily member 23 [Source:NCBI gene;Acc:378902]
80. CFUC-TIX CFUC-TIX 1 0.935 - - - - - 0.935 - - - -
81. CHSY1 ENSGALG00000026468 4 0.935 - - - - - 0.935 - - - - chondroitin sulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:17198]
82. SCARNA23 SCARNA23 2 0.935 - - - - - 0.935 - - - -
83. CCDC64 CCDC64 2 0.935 - - - - - 0.935 - - - -
84. KLHL23 ENSGALG00000020737 13 0.935 - - - - - 0.935 - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
85. CTSD ENSGALG00000006613 4 0.935 - - - - - 0.935 - - - - cathepsin D [Source:NCBI gene;Acc:396090]
86. SERPINB5 ENSGALG00000012873 24 0.935 - - - - - 0.935 - - - - serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
87. MAPK11 ENSGALG00000040023 15 0.935 - - - - - 0.935 - - - - mitogen-activated protein kinase 11 [Source:NCBI gene;Acc:417739]
88. FAM149B1 ENSGALG00000002693 16 0.935 - - - - - 0.935 - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
89. ENSGALG00000028531 ENSGALG00000028531 2 0.935 - - - - - 0.935 - - - -
90. TP63 ENSGALG00000007324 6 0.935 - - - - - 0.935 - - - - tumor protein p63 [Source:NCBI gene;Acc:374269]
91. GVINP1 ENSGALG00000016556 4 0.935 - - - - - 0.935 - - - - GTPase, very large interferon inducible pseudogene 1, transcript variant X1
92. MARCO ENSGALG00000012119 5 0.935 - - - - - 0.935 - - - - macrophage receptor with collagenous structure [Source:NCBI gene;Acc:395488]
93. WDR63 ENSGALG00000008696 15 0.935 - - - - - 0.935 - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
94. ENSGALG00000022715 ENSGALG00000022715 13 0.935 - - - - - 0.935 - - - -
95. FGL1 ENSGALG00000013606 42 0.935 - - - - - 0.935 - - - - fibrinogen like 1 [Source:NCBI gene;Acc:422728]
96. ACRBP 0 0.935 - - - - - 0.935 - - - - acrosin binding protein
97. BANK1 ENSGALG00000012292 17 0.935 - - - - - 0.935 - - - - B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]
98. DIET1 DIET1 1 0.935 - - - - - 0.935 - - - -
99. OSTN ENSGALG00000007226 33 0.935 - - - - - 0.935 - - - - osteocrin [Source:NCBI gene;Acc:424907]
100. STK35 ENSGALG00000036219 0 0.935 - - - - - 0.935 - - - - serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]

There are 140 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA