Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TNNC1

Gene Name Gene ID Reads Annotation
TNNC1 ENSGALG00000001459 7110 troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]











Genes with expression patterns similar to TNNC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNNC1 ENSGALG00000001459 7110 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
2. gga-mir-7474 ENSGALG00000033766 5727 1.701 0.920 - - - 0.781 - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
3. ACTC1 ENSGALG00000009844 20914 1.699 0.952 - - - 0.747 - - - - - actin, alpha, cardiac muscle 1 [Source:NCBI gene;Acc:423298]
4. TPM1 ENSGALG00000003521 11894 1.502 0.746 - - - 0.756 - - - - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
5. MYL1 ENSGALG00000002907 1300 1.47 0.726 - - - 0.744 - - - - - myosin, light chain 1, alkali; skeletal, fast [Source:NCBI gene;Acc:396470]
6. PAX1 ENSGALG00000039040 3339 1.469 - - 0.714 - 0.755 - - - - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
7. MYL2 ENSGALG00000004582 2245 0.97 0.970 - - - - - - - - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
8. MYL3 ENSGALG00000005448 3379 0.964 0.964 - - - - - - - - - myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:NCBI gene;Acc:396067]
9. HSPB7L ENSGALG00000028183 795 0.963 0.963 - - - - - - - - - heat shock protein beta-7-like
10. PPM1B ENSGALG00000030691 4513 0.949 - - - - - - - 0.949 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
11. MYBPC3 ENSGALG00000008148 315 0.949 0.949 - - - - - - - - - myosin binding protein C, cardiac [Source:NCBI gene;Acc:396013]
12. ENSGALG00000017324 ENSGALG00000017324 8235 0.947 - - - - - - - 0.947 - -
13. STX16 ENSGALG00000007541 6458 0.946 - - - - - - - 0.946 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
14. TRIM55 ENSGALG00000041327 1097 0.945 0.945 - - - - - - - - - tripartite motif containing 55 [Source:NCBI gene;Acc:420166]
15. TMEM33 ENSGALG00000014248 6069 0.944 - - - - - - - 0.944 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
16. TMEM185A ENSGALG00000009139 4424 0.941 - - - - - - - 0.941 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
17. TPM4 ENSGALG00000002563 15621 0.941 0.941 - - - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
18. MYH15 ENSGALG00000015358 6304 0.938 0.938 - - - - - - - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
19. ESRRG ENSGALG00000009645 2783 0.934 - - - - - - - 0.934 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
20. ENSGALG00000009863 ENSGALG00000009863 7375 0.932 - - - - - - - 0.932 - -
21. MKP3 MKP3 4418 0.93 - - - - - - - 0.930 - -
22. CSRP3 ENSGALG00000004044 456 0.929 0.929 - - - - - - - - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
23. XRCC3 ENSGALG00000011533 3768 0.929 - - - - - - - 0.929 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
24. C1orf50 ENSGALG00000004800 4894 0.929 - - - - - - - 0.929 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
25. PLA2G12A ENSGALG00000012185 5261 0.927 - - - - - - - 0.927 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
26. OSBPL1A ENSGALG00000015086 2702 0.927 - - - - - - - 0.927 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
27. HAUS6 ENSGALG00000015091 9671 0.927 - - - - - - - 0.927 - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
28. GTF2H4 GTF2H4 5227 0.926 - - - - - - - 0.926 - -
29. CUL5 ENSGALG00000017165 2480 0.924 - - - - - - - 0.924 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
30. ZBTB24 ENSGALG00000015231 1384 0.922 - - - - - - - 0.922 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
31. TAF1B ENSGALG00000016437 2318 0.921 - - - - - - - 0.921 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
32. SURF1 ENSGALG00000033754 2130 0.921 - - - - - - - 0.921 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
33. CCDC141 ENSGALG00000020788 606 0.919 0.919 - - - - - - - - - coiled-coil domain containing 141, transcript variant X5
34. POLD3 ENSGALG00000017307 2136 0.919 - - - - - - - 0.919 - - DNA polymerase delta 3, accessory subunit [Source:NCBI gene;Acc:419053]
35. NUDT4 ENSGALG00000011285 2998 0.918 - - - - - - - 0.918 - - nudix hydrolase 4, transcript variant X5
36. SERINC1 ENSGALG00000014868 12484 0.918 - - - - - - - 0.918 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
37. LSMD1 LSMD1 2562 0.917 - - - - - - - 0.917 - -
38. MCAT ENSGALG00000034275 4598 0.917 - - - - - - - 0.917 - - malonyl-CoA-acyl carrier protein transacylase [Source:HGNC Symbol;Acc:HGNC:29622]
39. PARPBP ENSGALG00000012756 1895 0.916 - - - - - - - 0.916 - - PARP1 binding protein [Source:NCBI gene;Acc:418092]
40. SUN1 ENSGALG00000003781 3442 0.916 - - - - - - - 0.916 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
41. FBXW5 ENSGALG00000030831 5927 0.915 - - - - - - - 0.915 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
42. ACTN2 ENSGALG00000014463 1724 0.914 0.914 - - - - - - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
43. STAU2 ENSGALG00000031390 2008 0.914 - - - - - - - 0.914 - - staufen double-stranded RNA binding protein 2 [Source:NCBI gene;Acc:420184]
44. MAP3K4 ENSGALG00000020003 6378 0.913 - - - - - - - 0.913 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
45. DMTF1 ENSGALG00000030844 3584 0.913 - - - - - - - 0.913 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
46. OSR1 ENSGALG00000016473 1202 0.912 - - - - - - - 0.912 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
47. NF1 ENSGALG00000005660 1610 0.912 - - - - - - - 0.912 - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
48. CLCN7 ENSGALG00000030826 3173 0.912 - - - - - - - 0.912 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
49. ZMYM3 ENSGALG00000005533 2927 0.911 - - - - - - - 0.911 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
50. PRKAB2 ENSGALG00000001678 1999 0.911 - - - - - - - 0.911 - - protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
51. CNEP1R1 ENSGALG00000029793 6536 0.91 - - - - - - - 0.910 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
52. OFD1 ENSGALG00000016576 1916 0.91 - - - - - - - 0.910 - - OFD1, centriole and centriolar satellite protein [Source:HGNC Symbol;Acc:HGNC:2567]
53. RBM24 ENSGALG00000012712 4138 0.91 0.910 - - - - - - - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
54. SUV420H1 SUV420H1 2361 0.909 - - - - - - - 0.909 - -
55. FAF1 ENSGALG00000010536 1522 0.909 - - - - - - - 0.909 - - Fas associated factor 1 [Source:HGNC Symbol;Acc:HGNC:3578]
56. POLR1C ENSGALG00000010349 7059 0.909 - - - - - - - 0.909 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
57. MED12L ENSGALG00000010370 765 0.909 - - - - - - - 0.909 - - mediator complex subunit 12 like [Source:HGNC Symbol;Acc:HGNC:16050]
58. NAPEPLD ENSGALG00000008285 1295 0.908 - - - - - - - 0.908 - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
59. gga-mir-1737 ENSGALG00000025206 3910 0.908 - - - - - - - 0.908 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
60. EF1A EF1A 2378 0.908 0.908 - - - - - - - - -
61. CLUAP1 ENSGALG00000030877 4269 0.907 - - - - - - - 0.907 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
62. RHPN2 ENSGALG00000004814 1865 0.907 - - - - - - - 0.907 - - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
63. DCUN1D2 ENSGALG00000029145 2414 0.907 - - - - - - - 0.907 - - defective in cullin neddylation 1 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20328]
64. GNPAT ENSGALG00000011163 4286 0.907 - - - - - - - 0.907 - - glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
65. CENPI ENSGALG00000005038 2608 0.907 - - - - - - - 0.907 - - centromere protein I [Source:NCBI gene;Acc:395207]
66. HSPB2 ENSGALG00000040842 197 0.907 0.907 - - - - - - - - - heat shock protein family B (small) member 2 [Source:NCBI gene;Acc:414136]
67. ENSGALG00000003847 ENSGALG00000003847 1220 0.907 - - - - - - - 0.907 - -
68. CHTF18 ENSGALG00000040157 2140 0.906 - - - - - - - 0.906 - - chromosome transmission fidelity factor 18 [Source:NCBI gene;Acc:416531]
69. TECRL ENSGALG00000038771 126 0.905 0.905 - - - - - - - - - trans-2,3-enoyl-CoA reductase like [Source:HGNC Symbol;Acc:HGNC:27365]
70. MST4 MST4 1931 0.904 - - - - - - - 0.904 - -
71. WDYHV1 ENSGALG00000030059 2961 0.904 - - - - - - - 0.904 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
72. SNTB1 ENSGALG00000034528 3907 0.904 - - - - - - - 0.904 - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
73. TNNT2 ENSGALG00000000302 568 0.904 0.904 - - - - - - - - - troponin T2, cardiac type [Source:NCBI gene;Acc:396433]
74. TTPAL ENSGALG00000004244 2734 0.903 - - - - - - - 0.903 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
75. COG5 ENSGALG00000042764 4205 0.903 - - - - - - - 0.903 - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
76. RPS6KA RPS6KA 6745 0.903 - - - - - - - 0.903 - -
77. DNA2 ENSGALG00000004037 5426 0.902 - - - - - - - 0.902 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
78. CHMP2B ENSGALG00000015496 3973 0.902 - - - - - - - 0.902 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
79. ZNF652 ENSGALG00000001279 1188 0.901 - - - - - - - 0.901 - - zinc finger protein 652 [Source:HGNC Symbol;Acc:HGNC:29147]
80. TMA16 ENSGALG00000009501 6651 0.901 - - - - - - - 0.901 - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
81. TRAFD1 ENSGALG00000043208 1009 0.9 - - - - - - - 0.900 - - TRAF-type zinc finger domain containing 1 [Source:NCBI gene;Acc:416884]
82. CMTM7 ENSGALG00000011488 1406 0.9 - - - - - - - 0.900 - - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
83. LGALS1_1 ENSGALG00000012420 1560 0.899 - - - - - - - 0.899 - - galectin 1 [Source:NCBI gene;Acc:396491]
84. ARHGAP12 ENSGALG00000007254 479 0.899 - - - - - - - 0.899 - - Rho GTPase activating protein 12 [Source:HGNC Symbol;Acc:HGNC:16348]
85. MICU1 ENSGALG00000004372 1978 0.899 - - - - - - - 0.899 - - mitochondrial calcium uptake 1 [Source:HGNC Symbol;Acc:HGNC:1530]
86. FAM92A1 FAM92A1 511 0.899 - - - - - - - 0.899 - -
87. ZNF142 ENSGALG00000011393 2078 0.899 - - - - - - - 0.899 - - zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
88. USP12P1 USP12P1 4193 0.898 - - - - - - - 0.898 - -
89. KIF25 ENSGALG00000011299 2601 0.898 - - - - - - - 0.898 - - kinesin family member 25 [Source:HGNC Symbol;Acc:HGNC:6390]
90. ADPRHL1 ENSGALG00000016826 133 0.898 0.898 - - - - - - - - - ADP-ribosylhydrolase like 1 [Source:HGNC Symbol;Acc:HGNC:21303]
91. ATG2B ENSGALG00000042088 918 0.897 - - - - - - - 0.897 - - autophagy related 2B [Source:HGNC Symbol;Acc:HGNC:20187]
92. SMPDL3B ENSGALG00000000737 223 0.897 - - - - - - - 0.897 - - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
93. SEMA6D ENSGALG00000030542 3780 0.897 - - - - - - - 0.897 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
94. DAB1 ENSGALG00000010857 1085 0.896 - - - - - - - 0.896 - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
95. KIAA1239 KIAA1239 263 0.896 - - - - - - - 0.896 - -
96. VCAM1 ENSGALG00000005257 102 0.896 0.896 - - - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
97. KAT6B ENSGALG00000005035 301 0.895 - - - - - - - 0.895 - - lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
98. ATAD2 ENSGALG00000034348 4440 0.894 - - - - - - - 0.894 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
99. ENSGALG00000014375 ENSGALG00000014375 4741 0.894 - - - - - - - 0.894 - -
100. ABCE1 ENSGALG00000009961 958 0.894 - - - - - - - 0.894 - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA