Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TNFSF11

Gene Name Gene ID Reads Annotation
TNFSF11 ENSGALG00000026163 26 TNF superfamily member 11 [Source:NCBI gene;Acc:428067]











Genes with expression patterns similar to TNFSF11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNFSF11 ENSGALG00000026163 26 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
2. TP53I3 ENSGALG00000016502 178 1.821 - - - 1.000 - - 0.821 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
3. PLCB2 ENSGALG00000042105 2 1.741 - - 0.804 0.937 - - - - - - phospholipase C beta 2 [Source:HGNC Symbol;Acc:HGNC:9055]
4. ENSGALG00000029120 ENSGALG00000029120 73 1.599 - - - - 0.750 - 0.849 - - -
5. MAP3K1 ENSGALG00000014718 60 1.561 - - - - 0.725 - 0.836 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
6. LOC112532977 ENSGALG00000020986 1 1 - - - 1.000 - - - - - - G-protein coupled receptor 35-like, transcript variant X2
7. gga-mir-30d ENSGALG00000018290 9 1 - - - 1.000 - - - - - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
8. ARL15 ENSGALG00000014911 13 1 - - - 1.000 - - - - - - ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]
9. IL17F ENSGALG00000016677 9 1 - - - 1.000 - - - - - - interleukin 17F
10. USH2A ENSGALG00000009652 2 1 - - - 1.000 - - - - - - usherin, transcript variant X3
11. BTBD6 ENSGALG00000033813 163 1 - - - 1.000 - - - - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
12. SYTL2L ENSGALG00000008326 5 1 - - - 1.000 - - - - - - synaptotagmin-like protein 2-like, transcript variant X4
13. GPD1L2 ENSGALG00000012061 31 1 - - - 1.000 - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
14. CECR2 ENSGALG00000013034 12 1 - - - 1.000 - - - - - - CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
15. ENSGALG00000028196 ENSGALG00000028196 8 1 - - - 1.000 - - - - - -
16. TTC7B ENSGALG00000010680 4 1 - - - 1.000 - - - - - - tetratricopeptide repeat domain 7B [Source:NCBI gene;Acc:423407]
17. ENSGALG00000006152 ENSGALG00000006152 2 1 - - 1.000 - - - - - - -
18. ACACB 6 1 - - - 1.000 - - - - - - acetyl-CoA carboxylase beta
19. MGRN1 ENSGALG00000037492 372 1 - - - 1.000 - - - - - - mahogunin ring finger 1 [Source:HGNC Symbol;Acc:HGNC:20254]
20. GSS ENSGALG00000003281 57 1 - - - 1.000 - - - - - - glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
21. P2RY13 ENSGALG00000039432 16 1 - - - 1.000 - - - - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
22. RBM43 ENSGALG00000012479 5 1 - - - 1.000 - - - - - - RNA binding motif protein 43 [Source:HGNC Symbol;Acc:HGNC:24790]
23. UAP1L1 ENSGALG00000034948 3 1 - - - 1.000 - - - - - - UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 [Source:HGNC Symbol;Acc:HGNC:28082]
24. ENSGALG00000006449 ENSGALG00000006449 1 1 - - - 1.000 - - - - - -
25. CYP2H1 CYP2H1 363 0.991 - - - - - - 0.991 - - -
26. FAM84A ENSGALG00000016459 400 0.974 - - - - - - 0.974 - - - family with sequence similarity 84 member A [Source:HGNC Symbol;Acc:HGNC:20743]
27. IL22RA1 ENSGALG00000004221 71 0.969 - - - - - - 0.969 - - - interleukin 22 receptor subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:13700]
28. ENSGALG00000005650 ENSGALG00000005650 6 0.951 - - - 0.951 - - - - - -
29. PLAC8 PLAC8 20 0.944 - - - - 0.944 - - - - -
30. gga-mir-6659 ENSGALG00000028216 6 0.944 - - - - 0.944 - - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
31. KCNJ3 ENSGALG00000012537 6 0.944 - - - - 0.944 - - - - - potassium voltage-gated channel subfamily J member 3 [Source:NCBI gene;Acc:396369]
32. GLDC ENSGALG00000015053 103 0.944 - - - - 0.944 - - - - - glycine decarboxylase [Source:NCBI gene;Acc:374222]
33. CCDC84 ENSGALG00000007689 18 0.944 - - - - 0.944 - - - - - coiled-coil domain containing 84 [Source:HGNC Symbol;Acc:HGNC:30460]
34. ENSGALG00000027164 ENSGALG00000027164 8 0.944 - - - - 0.944 - - - - -
35. TRPV2 ENSGALG00000004519 7 0.944 - - - - 0.944 - - - - - transient receptor potential cation channel subfamily V member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
36. PKDREJ 3 0.944 - - - - 0.944 - - - - - polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)
37. TAF5L ENSGALG00000011098 17 0.944 - - - - 0.944 - - - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
38. ABCA9 ENSGALG00000021395 5 0.944 - - - - 0.944 - - - - - ATP binding cassette subfamily A member 9
39. DPP10 ENSGALG00000012156 20 0.944 - - - - 0.944 - - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
40. PIKFYVE ENSGALG00000008842 3 0.939 - - 0.939 - - - - - - - phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
41. TSPAN4 ENSGALG00000006837 150 0.938 - - - - - - 0.938 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
42. C10orf67 15 0.937 - - - 0.937 - - - - - - chromosome 10 open reading frame 67, transcript variant X2
43. SULF2 ENSGALG00000004593 428 0.935 - - - - - - 0.935 - - - sulfatase 2 [Source:HGNC Symbol;Acc:HGNC:20392]
44. XRCC4 ENSGALG00000015620 28 0.92 - - - 0.920 - - - - - - X-ray repair cross complementing 4 [Source:HGNC Symbol;Acc:HGNC:12831]
45. MIP-3ALPHA MIP-3ALPHA 14 0.918 - - - - 0.918 - - - - -
46. ZBTB25 ENSGALG00000028942 21 0.915 - - - - - 0.915 - - - - zinc finger and BTB domain containing 25 [Source:HGNC Symbol;Acc:HGNC:13112]
47. TLR3 ENSGALG00000013468 35 0.91 - - 0.910 - - - - - - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
48. BCMO1 BCMO1 35 0.898 - - - - 0.898 - - - - -
49. OXCT1 ENSGALG00000014846 17 0.895 - - - - 0.895 - - - - - 3-oxoacid CoA-transferase 1 [Source:NCBI gene;Acc:427190]
50. ENSGALG00000005148 ENSGALG00000005148 9 0.89 - - - 0.890 - - - - - -
51. C12orf50 ENSGALG00000045093 9 0.89 - - - 0.890 - - - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
52. FGB ENSGALG00000009262 1169 0.889 - - - - - - 0.889 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
53. Mar-01 Mar-01 3 0.884 - - - - 0.884 - - - - -
54. GDF-9 GDF-9 18 0.883 - - - - 0.883 - - - - -
55. LCAT ENSGALG00000028928 484 0.878 - - - - - - 0.878 - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
56. H2AFX ENSGALG00000045705 7 0.872 - - - - - 0.872 - - - - H2A histone family member X
57. DCBLD1 ENSGALG00000014907 19 0.87 - - - - - - 0.870 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
58. MUC5B MUC5B 62 0.87 - - - - - - 0.870 - - -
59. ENSGALG00000023475 ENSGALG00000023475 19 0.87 - - - - - - 0.870 - - -
60. ANO3 ENSGALG00000013311 16 0.87 - - - - - - 0.870 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
61. C18H17ORF67 ENSGALG00000024428 10 0.87 - - - - - - 0.870 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
62. TEX2 ENSGALG00000003496 23 0.87 - - - - - - 0.870 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
63. NAPRT1 NAPRT1 227 0.866 - - - - - - 0.866 - - -
64. LAMP1 ENSGALG00000037697 247 0.865 - - - - - - 0.865 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
65. VTI1B ENSGALG00000009526 133 0.86 - - - - - - 0.860 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
66. SVOPL ENSGALG00000012812 27 0.859 - - - - - - 0.859 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
67. MOCOS ENSGALG00000013149 25 0.858 - - - - - - 0.858 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
68. NKD1 ENSGALG00000003767 76 0.856 - - - - - - 0.856 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
69. ANGPTL3 ENSGALG00000010978 335 0.854 - - - - - - 0.854 - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
70. PDSS1 ENSGALG00000007559 432 0.853 - - - - - - 0.853 - - - Gallus gallus prenyl (decaprenyl) diphosphate synthase, subunit 1 (PDSS1), mRNA. [Source:RefSeq mRNA;Acc:NM_001321600]
71. POFUT1 ENSGALG00000006594 367 0.852 - - - - - - 0.852 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
72. ENDOV 121 0.848 - - - - - - 0.848 - - - endonuclease V
73. C9orf171 C9orf171 35 0.848 - - - - - - 0.848 - - -
74. TSPAN14 ENSGALG00000002414 69 0.847 - - - - - - 0.847 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
75. KCTD5 ENSGALG00000006423 192 0.843 - - - - - - 0.843 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
76. CADM2 ENSGALG00000043393 810 0.843 - - - - - - 0.843 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
77. FAM82B FAM82B 374 0.84 - - - - - - 0.840 - - -
78. SCNN1B ENSGALG00000006202 87 0.838 - - - - 0.838 - - - - - sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600]
79. RLBP1 ENSGALG00000006676 52 0.836 - - - - - 0.836 - - - - retinaldehyde binding protein 1 [Source:NCBI gene;Acc:415492]
80. ATP6V1AL ENSGALG00000000048 21 0.835 - - - - - - 0.835 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
81. ENSGALG00000026735 ENSGALG00000026735 5 0.834 - - - 0.834 - - - - - -
82. RGR ENSGALG00000002299 17 0.834 - - - 0.834 - - - - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
83. RIPPLY2 ENSGALG00000015845 34 0.831 - - - - - - 0.831 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
84. ARHGAP15 ENSGALG00000012421 58 0.83 - - - - - - 0.830 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
85. ENSGALG00000014900 ENSGALG00000014900 335 0.829 - - - - - - 0.829 - - -
86. NFIL3 ENSGALG00000015209 15 0.827 - - - 0.827 - - - - - - nuclear factor, interleukin 3 regulated [Source:NCBI gene;Acc:395326]
87. gga-mir-1458 ENSGALG00000030959 41 0.827 - - - 0.827 - - - - - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
88. TDRD5 ENSGALG00000033634 40 0.827 - - - - - - 0.827 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
89. ZDHHC5 ENSGALG00000007362 296 0.825 - - - - - - 0.825 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
90. TRAF3IP2 ENSGALG00000015026 26 0.824 - - - 0.824 - - - - - - TRAF3 interacting protein 2, transcript variant X1
91. ENSGALG00000020753 ENSGALG00000020753 159 0.823 - - - - - - 0.823 - - -
92. RGS8 ENSGALG00000026263 124 0.822 - - - - 0.822 - - - - - regulator of G protein signaling 8 [Source:HGNC Symbol;Acc:HGNC:16810]
93. PCGF2 ENSGALG00000018815 38 0.82 - - - - - - 0.820 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
94. FAH ENSGALG00000006482 589 0.82 - - - - - - 0.820 - - - fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
95. NCOA6 ENSGALG00000001182 83 0.82 - - - - - - 0.820 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
96. FAM21A FAM21A 251 0.818 - - - - - - 0.818 - - -
97. LRRC2 ENSGALG00000013634 69 0.817 - - - - - - 0.817 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
98. YTHDC1 ENSGALG00000035906 471 0.815 - - - - - - 0.815 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
99. FBXL18 ENSGALG00000004611 97 0.815 - - - - - - 0.815 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
100. SNORD2 SNORD2 51 0.815 - - - - - - 0.815 - - -

There are 206 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA