Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TNFRSF11B

Gene Name Gene ID Reads Annotation
TNFRSF11B ENSGALG00000043167 911 TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]











Genes with expression patterns similar to TNFRSF11B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TNFRSF11B ENSGALG00000043167 911 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
2. LYRM4 ENSGALG00000027339 2917 1.923 - - - - - - 0.926 0.997 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
3. MRM1 ENSGALG00000039523 2009 1.749 - - - - - - 0.972 - - 0.777 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
4. TLE3 ENSGALG00000008120 2655 1.724 - - - - - - 0.726 0.998 - - transducin like enhancer of split 3, transcript variant X10
5. ABCC1 ENSGALG00000006646 2596 1.621 - - - - - - 0.808 - - 0.813 ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
6. TMEM129 ENSGALG00000015710 1519 1.617 - - - - - - 0.833 - - 0.784 transmembrane protein 129 [Source:NCBI gene;Acc:422900]
7. YIPF4 ENSGALG00000010547 4337 1.472 - - - - - - 0.763 - - 0.709 Yip1 domain family member 4 [Source:NCBI gene;Acc:421464]
8. GOT2 ENSGALG00000002321 4961 0.999 - - - - - - - 0.999 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
9. EPM2A ENSGALG00000012275 872 0.999 - - - - - - - 0.999 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
10. PRKAR2A ENSGALG00000007023 909 0.999 - - - - - - - 0.999 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
11. EEFSEC ENSGALG00000038684 298 0.999 - - - - - - - 0.999 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
12. B9D1 ENSGALG00000005096 760 0.999 - - - - - - - 0.999 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
13. COL14A1 ENSGALG00000037675 2652 0.999 - - - - - - - 0.999 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
14. ELMO2 ENSGALG00000007246 4569 0.998 - - - - - - - 0.998 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
15. POLR3H ENSGALG00000011947 2899 0.998 - - - - - - - 0.998 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
16. TCTEX1D2 ENSGALG00000027722 2201 0.998 - - - - - - - 0.998 - - Tctex1 domain containing 2
17. MRPS31 ENSGALG00000017033 9287 0.998 - - - - - - - 0.998 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
18. TNPO3 ENSGALG00000039420 5178 0.998 - - - - - - - 0.998 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
19. CCDC167 ENSGALG00000010151 3567 0.998 - - - - - - - 0.998 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
20. WDR91 ENSGALG00000011724 5787 0.998 - - - - - - - 0.998 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
21. C26H6ORF106 C26H6ORF106 2168 0.998 - - - - - - - 0.998 - -
22. KCNK5 ENSGALG00000034077 3233 0.998 - - - - - - - 0.998 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
23. PM20D1 ENSGALG00000000724 2108 0.998 - - - - - - - 0.998 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
24. CLIP1 ENSGALG00000004467 1058 0.998 - - - - - - - 0.998 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
25. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.997 - - - - - - - 0.997 - -
26. GNG10 ENSGALG00000015683 6905 0.997 - - - - - - - 0.997 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
27. KPNA1 ENSGALG00000014426 2724 0.997 - - - - - - - 0.997 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
28. MRPS7 ENSGALG00000007999 5445 0.996 - - - - - - - 0.996 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
29. CEP192 ENSGALG00000035625 2270 0.996 - - - - - - - 0.996 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
30. ARFGAP3 ENSGALG00000014140 4612 0.996 - - - - - - - 0.996 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
31. CAPZA1 ENSGALG00000001547 24242 0.995 - - - - - - - 0.995 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
32. OTUD4 ENSGALG00000009968 3919 0.994 - - - - - - - 0.994 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
33. NOVA1 ENSGALG00000009850 7584 0.993 - - - - - - - 0.993 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
34. RAB24 ENSGALG00000002984 6264 0.992 - - - - - - - 0.992 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
35. MFF ENSGALG00000003079 5289 0.992 - - - - - - - 0.992 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
36. BMP5 ENSGALG00000016293 2119 0.991 - - - - - - - 0.991 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
37. LGMN ENSGALG00000010811 7401 0.99 - - - - - - - 0.990 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
38. L3HYPDH ENSGALG00000012011 2212 0.99 - - - - - - - 0.990 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
39. PIGF ENSGALG00000020057 201 0.99 - - - - - - 0.990 - - - phosphatidylinositol glycan anchor biosynthesis class F [Source:HGNC Symbol;Acc:HGNC:8962]
40. DTX2 ENSGALG00000001905 1475 0.989 - - - - - - 0.989 - - - deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
41. SGCE ENSGALG00000009670 3070 0.989 - - - - - - - 0.989 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
42. TRIM9 ENSGALG00000012367 1267 0.989 - - - - - - - 0.989 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
43. HHIP ENSGALG00000009948 1536 0.988 - - - - - - - 0.988 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
44. PDIA5 ENSGALG00000011689 6913 0.988 - - - - - - - 0.988 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
45. SERPINH1 ENSGALG00000011214 15311 0.988 - - - - - - - 0.988 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
46. PTDSS2 ENSGALG00000004300 682 0.988 - - - - - - 0.988 - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
47. PUSL1_1 ENSGALG00000001701, ENSGALG00000001714 341 0.988 - - - - - - 0.988 - - - pseudouridylate synthase-like 1, transcript variant X8
48. LPXN 133 0.987 - - - - - - 0.987 - - - leupaxin, transcript variant X4
49. ATPAF1 ENSGALG00000010444 3677 0.987 - - - - - - - 0.987 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
50. KLF11 ENSGALG00000016440 65 0.987 - - - - - - 0.987 - - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
51. TP53BP1 ENSGALG00000042201 708 0.987 - - - - - - 0.987 - - - tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
52. SRA1 ENSGALG00000040453 266 0.987 - - - - - - 0.987 - - - steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
53. SLC25A14 ENSGALG00000004063 5574 0.987 - - - - - - - 0.987 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
54. TRMT10A ENSGALG00000012264 2467 0.987 - - - - - - - 0.987 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
55. C7orf63 C7orf63 147 0.986 - - - - - - 0.986 - - -
56. SHROOM2 ENSGALG00000030802 4517 0.986 - - - - - - - 0.986 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
57. UPF3B ENSGALG00000008618 12350 0.985 - - - - - - - 0.985 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
58. BBS4 ENSGALG00000001798 667 0.985 - - - - - - 0.985 - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
59. C7orf55 C7orf55 7083 0.985 - - - - - - 0.985 - - -
60. SLC28A3 ENSGALG00000012593 131 0.984 - - - - - - 0.984 - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
61. CLASP1 ENSGALG00000011645 1378 0.984 - - - - - - 0.984 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
62. CLK3 ENSGALG00000001362 2171 0.983 - - - - - - 0.983 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
63. FXYD6 ENSGALG00000025937 4073 0.982 - - - - - - 0.982 - - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
64. BRMS1L ENSGALG00000010093 4964 0.982 - - - - - - - 0.982 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
65. BCAR3 358 0.982 - - - - - - 0.982 - - - breast cancer anti-estrogen resistance 3, transcript variant X9
66. CYB5B ENSGALG00000000660 9733 0.98 - - - - - - - 0.980 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
67. ENSGALG00000002595 ENSGALG00000002595 32163 0.98 - - - - - - - 0.980 - -
68. ARHGEF3 ENSGALG00000005481 683 0.98 - - - - - - 0.980 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]
69. ISCA1 ENSGALG00000012606 10342 0.98 - - - - - - - 0.980 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
70. PTP4A1 ENSGALG00000016271 23953 0.979 - - - - - - - 0.979 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
71. PIGL ENSGALG00000004492 669 0.977 - - - - - - 0.977 - - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
72. MYH15 ENSGALG00000015358 6304 0.977 - - - - - - 0.977 - - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
73. WHSC1 1712 0.977 - - - - - - 0.977 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
74. LRR1 ENSGALG00000012230 1062 0.976 - - - - - - 0.976 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
75. HYAL1 ENSGALG00000000785 1778 0.976 - - - - - - 0.976 - - - hyaluronoglucosaminidase 1, transcript variant X3
76. YWHAQ ENSGALG00000016433 3450 0.975 - - - - - - 0.975 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
77. ARID4A ENSGALG00000012037 8554 0.975 - - - - - - - 0.975 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
78. IWS1 ENSGALG00000001803 2305 0.974 - - - - - - 0.974 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
79. FAM136A ENSGALG00000042163 39487 0.974 - - - - - - - 0.974 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
80. TUFT1 ENSGALG00000032955 1317 0.974 - - - - - - 0.974 - - - tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]
81. ASTN2 ENSGALG00000007038 1748 0.973 - - - - - - 0.973 - - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
82. RPB6 RPB6 9517 0.972 - - - - - - - 0.972 - -
83. NMD3 ENSGALG00000009533 8726 0.972 - - - - - - - 0.972 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
84. RFFL ENSGALG00000002225 928 0.971 - - - - - - 0.971 - - - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
85. C11H19ORF12 C11H19ORF12 5149 0.971 - - - - - - 0.971 - - -
86. TTI1 ENSGALG00000006791 1218 0.97 - - - - - - 0.970 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
87. ZNF830 ENSGALG00000013156 3896 0.968 - - - - - - 0.968 - - - zinc finger protein 830
88. PRDM10 632 0.967 - - - - - - 0.967 - - - PR domain 10, transcript variant X10
89. THOC3 ENSGALG00000024172 7617 0.967 - - - - - - 0.967 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
90. FDFT1 ENSGALG00000016665 3053 0.967 - - - - - - 0.967 - - - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
91. ESCO1 ENSGALG00000014936 739 0.964 - - - - - - 0.964 - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24645]
92. ANGPTL2 ENSGALG00000000927 2580 0.964 - - - - - - 0.964 - - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
93. COPS3 ENSGALG00000004834 16012 0.962 - - - - - - - 0.962 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
94. BTBD7 4136 0.962 - - - - - - 0.962 - - - BTB domain containing 7, transcript variant X2
95. CAT ENSGALG00000030187 7534 0.961 - - - - - - - 0.961 - - catalase [Source:NCBI gene;Acc:423600]
96. LMO4 ENSGALG00000006252 3686 0.96 - - - - - - 0.960 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
97. NAT10 ENSGALG00000014573 12754 0.959 - - - - - - - 0.959 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
98. LMX1A ENSGALG00000003424 335 0.957 - - - - - - 0.957 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
99. COL17A1 ENSGALG00000029617 167 0.957 - - - - - - 0.957 - - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
100. EFNB1 ENSGALG00000036539 2706 0.956 - - - - - - 0.956 - - - ephrin B1 [Source:NCBI gene;Acc:395896]

There are 420 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA