Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TNFRSF11B

Gene Name Gene ID Reads Annotation
TNFRSF11B ENSDARG00000098377 98 tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]










Genes with expression patterns similar to TNFRSF11B

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TNFRSF11B ENSDARG00000098377 98 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
2. elavl2 ENSDARG00000040732 44 2.594 - 0.978 - - - - 0.896 - 0.720 ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
3. ZNF337_5 ZNF337_5 48 2.592 - - - - - 0.822 0.807 0.963 -
4. ppm1na ENSDARG00000010231 3 1.925 1.000 - - - - - 0.925 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
5. si:dkey-211g8.6 ENSDARG00000063088 19 1.925 1.000 - - - - - 0.925 - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
6. cd74a ENSDARG00000009087 20 1.925 1.000 - - - - - 0.925 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
7. bcl11ba ENSDARG00000062510 169 1.921 1.000 - - - - 0.921 - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
8. si:dkey-173l11.3 si:dkey-173l11.3 14 1.903 - 0.978 - - - - 0.925 - -
9. ttll10 ENSDARG00000090472 36 1.898 - - - - - - 0.950 0.948 - tubulin tyrosine ligase-like family, member 10 [Source:ZFIN;Acc:ZDB-GENE-081104-350]
10. si:ch73-386o14.1 si:ch73-386o14.1 82 1.86 1.000 - - - - - 0.860 - -
11. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.835 0.865 0.970 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
12. gpx1b ENSDARG00000006207 67 1.829 - - - - - - 0.896 0.933 - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
13. tdrd5 ENSDARG00000071450 25 1.823 0.911 - 0.912 - - - - - - tudor domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-502]
14. mogat3b ENSDARG00000003635 394 1.818 - 0.892 - - - - - 0.926 - monoacylglycerol O-acyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-110302-2]
15. FP102801.1 FP102801.1 294 1.797 1.000 - - - - - 0.797 - -
16. c1qtnf5 ENSDARG00000056134 729 1.76 - - - - 0.835 - 0.925 - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
17. tmc4 ENSDARG00000031757 30 1.748 1.000 - - - - - 0.748 - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
18. TMEM27 TMEM27 261 1.736 0.893 - - - - - 0.843 - -
19. mocs3 ENSDARG00000008239 163 1.727 - - - - - - 0.813 0.914 - molybdenum cofactor synthesis 3 [Source:ZFIN;Acc:ZDB-GENE-040426-782]
20. si:ch211-273j9.2 si:ch211-273j9.2 79 1.723 1.000 - - - - - 0.723 - -
21. golga2 ENSDARG00000063197 30 1.721 - - - - - 0.768 - 0.953 - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
22. grifin ENSDARG00000033382 141 1.711 0.786 - - - - - 0.925 - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
23. si:ch211-42i9.5 si:ch211-42i9.5 21 1.704 1.000 - - - - 0.704 - - -
24. dpm1 ENSDARG00000057011, ENSDARG00000112573 1089 1.701 - 0.842 - - - - - 0.859 - dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-115]
25. sh3bp4 ENSDARG00000030104, ENSDARG00000109621 51 1.698 0.802 - - - - - 0.896 - - SH3-domain binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-509]
26. si:ch211-222k6.3 ENSDARG00000071578 127 1.694 - 0.889 - - - - 0.805 - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
27. b3gnt3.4 ENSDARG00000058100 117 1.692 0.745 0.947 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
28. AL929220.1 ENSDARG00000103323 14 1.688 - - - - - - 0.925 - 0.763
29. slc25a15a ENSDARG00000063539 50 1.673 0.775 - - - - - - 0.898 - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
30. xrcc4 ENSDARG00000010732 553 1.673 - 0.894 - - - - - 0.779 - X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1755]
31. slc25a29 ENSDARG00000057352 9 1.655 - - - - 0.730 - 0.925 - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
32. il6st ENSDARG00000104693 55 1.655 0.841 - - - - - 0.814 - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
33. rassf10a 417 1.642 - - - - - - 0.835 0.807 - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
34. ttc12 ENSDARG00000056896 97 1.641 - - - - 0.712 - 0.929 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
35. brf1a ENSDARG00000017835 206 1.62 - - - - - - - 0.861 0.759 BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
36. zbtb43 ENSDARG00000045983 343 1.613 - 0.746 - - - 0.867 - - - zinc finger and BTB domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-060526-378]
37. msi2a ENSDARG00000033901, ENSDARG00000114442 256 1.606 - 0.861 - - - - 0.745 - - musashi RNA-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030826-25]
38. eno4 ENSDARG00000070598 78 1.593 0.786 - - - - - 0.807 - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
39. ARMCX3 ARMCX3 328 1.585 - - - - - - - 0.836 0.749
40. arhgef1a ENSDARG00000040380 239 1.576 - 0.756 - - - - - 0.820 - Rho guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-030722-5]
41. CABZ01088933.1 CABZ01088933.1 40 1.57 - - - - - 0.768 0.802 - -
42. stm ENSDARG00000035694 1567 1.569 - 0.782 - - - - 0.787 - - starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
43. MAN2B2 ENSDARG00000079463 316 1.562 0.843 0.719 - - - - - - - mannosidase, alpha, class 2B, member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-166]
44. mfsd4b ENSDARG00000079571 556 1.561 0.716 - - - - - 0.845 - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
45. SNORA73_2 SNORA73_2 31 1.558 - - - - 0.771 - 0.787 - -
46. ing5a ENSDARG00000022413 268 1.557 - 0.703 - - - - 0.854 - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
47. zte25 zte25 29 1.555 - - - - - 0.768 - - 0.787
48. si:ch211-154o6.3 ENSDARG00000099846, ENSDARG00000112144 203 1.552 - - - - - - - 0.823 0.729 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
49. AAED1 ENSDARG00000075299 406 1.535 - 0.808 - - - - - 0.727 - AhpC/TSA antioxidant enzyme domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110914-194]
50. tbc1d2b ENSDARG00000061986 247 1.517 - - - - - - 0.790 0.727 - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
51. fhl2b ENSDARG00000003991 32 1.515 0.802 - - - - - 0.713 - - four and a half LIM domains 2b [Source:ZFIN;Acc:ZDB-GENE-041010-121]
52. HYAL1 ENSDARG00000059916 134 1.514 - 0.760 0.754 - - - - - - hyaluronoglucosaminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060312-42]
53. tfap2e ENSDARG00000008861 497 1.501 - - - - - 0.721 0.780 - - transcription factor AP-2 epsilon [Source:ZFIN;Acc:ZDB-GENE-040426-1455]
54. dock9b ENSDARG00000016311 122 1.495 - - - - - - - 0.788 0.707 dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
55. ube2b ENSDARG00000026035 51 1.471 - - - - - 0.748 0.723 - - ubiquitin-conjugating enzyme E2B (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-040718-247]
56. zgc:174224_2 ENSDARG00000093875 22 1.43 - - - - 0.726 0.704 - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
57. fam193b ENSDARG00000102831 442 1.411 0.702 - - - - 0.709 - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
58. mipa ENSDARG00000037285, ENSDARG00000116133 507 1 1.000 - - - - - - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
59. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1 1.000 - - - - - - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
60. CR391995.1 ENSDARG00000098041 48 1 1.000 - - - - - - - -
61. CT573253.1 CT573253.1 4 1 1.000 - - - - - - - -
62. cbln4 ENSDARG00000061240 67 1 1.000 - - - - - - - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
63. si:dkey-85k15.4 ENSDARG00000095047 25 1 1.000 - - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
64. BX005421.6 BX005421.6 4 1 1.000 - - - - - - - -
65. CABZ01021435.3 CABZ01021435.3 5 1 1.000 - - - - - - - -
66. guca1c ENSDARG00000030758 9 1 1.000 - - - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
67. sorcs3b ENSDARG00000077349 72 1 1.000 - - - - - - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
68. ggt1l2.2 ENSDARG00000087054 1 1 1.000 - - - - - - - - gamma-glutamyltransferase 1 like 2.2 [Source:ZFIN;Acc:ZDB-GENE-090312-37]
69. crybb1 ENSDARG00000068507 2255 1 1.000 - - - - - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
70. CR759816.1 ENSDARG00000098977 27 1 1.000 - - - - - - - -
71. stx3a ENSDARG00000001880 69 1 1.000 - - - - - - - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
72. ero1l ero1l 66 1 1.000 - - - - - - - -
73. trpa1b ENSDARG00000031875 39 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
74. crybb1l1 ENSDARG00000007576 1020 1 1.000 - - - - - - - - crystallin, beta B1, like 1 [Source:ZFIN;Acc:ZDB-GENE-100112-3]
75. U3_7 U3_7 4 1 1.000 - - - - - - - -
76. ATG7 ENSDARG00000102893 1 1 1.000 - - - - - - - - ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
77. pde6c ENSDARG00000100397 49 1 1.000 - - - - - - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
78. gpr124 gpr124 25 1 1.000 - - - - - - - -
79. akap10 ENSDARG00000059549 1 1 1.000 - - - - - - - - A kinase (PRKA) anchor protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2535]
80. or131-1 ENSDARG00000005865 1 1 1.000 - - - - - - - - odorant receptor, family H, subfamily 131, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-45]
81. BX323793.1 ENSDARG00000104134 24 1 1.000 - - - - - - - - 1-phosphatidylinositol phosphodiesterase-like [Source:NCBI gene;Acc:100331378]
82. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 1.000 - - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
83. si:dkey-42i9.8 ENSDARG00000071541 17 1 1.000 - - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
84. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 1.000 - - - - - - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
85. si:ch211-220f16.1 ENSDARG00000093977 4 1 1.000 - - - - - - - - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
86. acoxl ENSDARG00000020149 14 1 1.000 - - - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
87. pou2f2b pou2f2b 134 1 1.000 - - - - - - - -
88. ahdc1 ENSDARG00000093453 233 1 1.000 - - - - - - - - AT hook, DNA binding motif, containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-584]
89. OTUD7A ENSDARG00000045556 1 1 1.000 - - - - - - - - OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
90. BX927308.3 BX927308.3 126 1 1.000 - - - - - - - -
91. zgc:113295_2 ENSDARG00000074768, ENSDARG00000103947 4 1 1.000 - - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
92. myl7 ENSDARG00000019096 1023 1 1.000 - - - - - - - - myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
93. ZSWIM2 ENSDARG00000075700 8 1 1.000 - - - - - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
94. SECISBP2L 1 1 1.000 - - - - - - - - SECIS binding protein 2-like
95. TMPRSS7 5 1 1.000 - - - - - - - - transmembrane protease, serine 7
96. PFKL PFKL 9 1 1.000 - - - - - - - -
97. g6pcb ENSDARG00000014967 8 1 1.000 - - - - - - - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
98. cabp4 ENSDARG00000008866 4 1 1.000 - - - - - - - - calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]
99. CIT_1 CIT_1 6 1 1.000 - - - - - - - -
100. bicd1a ENSDARG00000079496 2 1 1.000 - - - - - - - - bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]

There are 1531 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA