Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMX3

Gene Name Gene ID Reads Annotation
TMX3 ENSGALG00000013757 6387 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]











Genes with expression patterns similar to TMX3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMX3 ENSGALG00000013757 6387 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
2. KMT2C 6306 1.682 - - - - - - 0.845 - - 0.837 lysine methyltransferase 2C, transcript variant X14
3. SMC4 ENSGALG00000009553 15715 1.674 - - - - - - 0.841 - - 0.833 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
4. FBXO5 ENSGALG00000013607 6156 1.666 - - - - - - 0.849 - - 0.817 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
5. TCERG1 ENSGALG00000007528 6346 1.66 - - - - - - - 0.869 - 0.791 transcription elongation regulator 1 [Source:HGNC Symbol;Acc:HGNC:15630]
6. UCHL3 ENSGALG00000016921 16208 1.633 - - - - - - 0.840 - - 0.793 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
7. MRPL37 ENSGALG00000010761 10596 1.603 - - - - - - 0.723 0.880 - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
8. RAB10 ENSGALG00000016535 5272 1.597 - - - - - - 0.829 - - 0.768 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
9. PPFIA1 ENSGALG00000035774 5258 1.597 - - - - - - 0.738 - - 0.859 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
10. MAN2A1 ENSGALG00000000255 4543 1.595 - - - - - - 0.767 - - 0.828 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
11. SDF2L1 ENSGALG00000031982 6084 1.594 - - - - - - 0.777 - - 0.817 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
12. MRPL50 ENSGALG00000015543 11649 1.594 - - - - - - 0.766 - - 0.828 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
13. SPDL1 ENSGALG00000001942 4403 1.593 - - - - - - 0.761 - - 0.832 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
14. GGA.31975 GGA.31975 8825 1.588 - - - - - - 0.794 - - 0.794
15. SLC30A5 ENSGALG00000014787 5573 1.583 - - - - - - 0.765 - - 0.818 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
16. SUDS3 ENSGALG00000007393 8322 1.578 - - - - - - 0.741 0.837 - - SDS3 homolog, SIN3A corepressor complex component [Source:NCBI gene;Acc:427713]
17. CTSO ENSGALG00000009373 4186 1.576 - - - - - - 0.793 - - 0.783 cathepsin O [Source:NCBI gene;Acc:422410]
18. ENSGALG00000009044 ENSGALG00000009044 14492 1.573 - - - - - - 0.751 - - 0.822
19. GSTAL2 ENSGALG00000028551 4899 1.572 - - - - - - 0.734 - - 0.838 glutathione S-transferase alpha-like 2, transcript variant X4
20. FANCL ENSGALG00000030022 7423 1.569 - - - - - - 0.784 - - 0.785 FA complementation group L [Source:NCBI gene;Acc:421202]
21. PCNP ENSGALG00000015330 15750 1.567 - - - - - - 0.720 - - 0.847 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
22. gga-mir-7476 gga-mir-7476 20209 1.558 - - - - - - 0.796 - - 0.762
23. SMDT1 ENSGALG00000011897 9360 1.556 - - - - - - 0.809 - - 0.747 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
24. SEC14L1 ENSGALG00000001684 2776 1.554 - - - - - - 0.708 - - 0.846 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
25. GXYLT1 ENSGALG00000009532 5682 1.546 - - - - - - 0.728 - - 0.818 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
26. ARL13B ENSGALG00000015412 2968 1.541 - - - - - - 0.724 - - 0.817 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
27. GLO1 ENSGALG00000010127 31662 1.54 - - - - - - 0.793 - - 0.747 glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
28. ZBED4 ENSGALG00000032659 5313 1.538 - - - - - - 0.703 - - 0.835 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
29. CAMSAP1 ENSGALG00000001692 2617 1.537 - - - - - - 0.715 - - 0.822 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
30. SPG21 ENSGALG00000007262 8050 1.533 - - - - - - 0.759 - - 0.774 SPG21, maspardin [Source:NCBI gene;Acc:415526]
31. QDPR ENSGALG00000030070 6953 1.533 - - - - - - 0.722 - - 0.811 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
32. RAB5C ENSGALG00000003359 5597 1.528 - - - - - - 0.725 - - 0.803 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
33. TMX4 ENSGALG00000028587 3513 1.526 - - - - - - 0.737 - - 0.789 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
34. TMED7 ENSGALG00000028484 21008 1.515 - - - - - - 0.749 - - 0.766 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
35. NEO1 ENSGALG00000001774 10165 1.515 - - - - - - 0.703 - - 0.812 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
36. AFG3L2 ENSGALG00000013853 1138 1.511 - - 0.733 - - - - - - 0.778 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
37. TRRAP ENSGALG00000003596 6032 1.506 - - - - - - 0.742 - - 0.764 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
38. CHRAC1 ENSGALG00000040823 5695 1.505 - - - - - - 0.764 - - 0.741 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
39. WASF1 ENSGALG00000015066 5628 1.505 - - - - - - 0.733 - - 0.772 WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
40. ECI2 ENSGALG00000012809 3692 1.502 - - - - - - 0.725 - - 0.777 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
41. TM9SF2L ENSGALG00000006487 5566 1.501 - - - - - - 0.783 0.718 - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
42. PTP4A2 ENSGALG00000003265 24826 1.498 - - - - - - 0.734 - - 0.764 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
43. RBBP8 ENSGALG00000014982 3255 1.495 - - - - - - 0.711 - - 0.784 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
44. LDB2 ENSGALG00000014485 22490 1.491 - - - - - - 0.738 - - 0.753 LIM domain binding 2 [Source:NCBI gene;Acc:395631]
45. CHMP5 ENSGALG00000013160 13347 1.488 - - - - - - 0.758 - - 0.730 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
46. UPF2 ENSGALG00000033772 9548 1.488 - - - - - - 0.752 - - 0.736 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
47. SP3 ENSGALG00000031796 8997 1.486 - - - - - - 0.785 - - 0.701 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
48. GTF2F2 ENSGALG00000016974 7524 1.483 - - - - - - 0.721 - - 0.762 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
49. WDR53 ENSGALG00000006395 4938 1.483 - - - - - - 0.712 - - 0.771 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
50. DHX38 ENSGALG00000000787 6913 1.477 - - - - - - 0.754 - - 0.723 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
51. LOC776067 ENSGALG00000016808 9164 1.476 - - - - - - 0.761 - - 0.715 E3 SUMO-protein ligase RanBP2-like, transcript variant X50
52. DGCR2 ENSGALG00000005891 8405 1.475 - - - - - - 0.767 - - 0.708 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
53. LGALS1 ENSGALG00000012420 13993 1.473 - - - - - - 0.762 - - 0.711 galectin 1 [Source:NCBI gene;Acc:396491]
54. LOC426385 ENSGALG00000026301 2703 1.471 - - - - - - 0.753 - - 0.718 serine/threonine kinase 35-like, transcript variant X2
55. LEPROT ENSGALG00000011047 7132 1.469 - - - - - - 0.735 - - 0.734 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
56. FNBP1L ENSGALG00000005850 9219 1.466 - - - - - - 0.735 - - 0.731 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
57. ALDH7A1 ENSGALG00000008229 5891 1.458 - - - - - - 0.708 - - 0.750 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
58. LIMS1 ENSGALG00000029970 7244 1.435 - - - - - - 0.720 - - 0.715 LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
59. COMMD7 ENSGALG00000006630 11491 1.433 - - - - - - 0.711 - - 0.722 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
60. PDE3B ENSGALG00000006035 3732 1.425 - - - - - - 0.716 - - 0.709 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
61. GPR162 ENSGALG00000022926 7181 1.419 - - - - - - 0.701 - - 0.718 G protein-coupled receptor 162 [Source:HGNC Symbol;Acc:HGNC:16693]
62. AHSA1 ENSGALG00000010463 15252 0.929 - - - - - - - 0.929 - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
63. CWF19L2 ENSGALG00000017171 4590 0.925 - - - - - - - 0.925 - - CWF19 like cell cycle control factor 2 [Source:HGNC Symbol;Acc:HGNC:26508]
64. HES1 ENSGALG00000028015 6818 0.9 - - - - - - - 0.900 - - hes family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:5192]
65. TMEM167A ENSGALG00000027332 13862 0.899 - - - - - - 0.899 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
66. MRPL15 ENSGALG00000041086 16820 0.893 - - - - - - 0.893 - - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
67. SNW1 ENSGALG00000010501 17767 0.875 - - - - - - - - - 0.875 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
68. DNAJC3 ENSGALG00000016894 9048 0.874 - - - - - - 0.874 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
69. HSPA4 ENSGALG00000040882 20966 0.872 - - - - - - 0.872 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
70. CCDC88A ENSGALG00000043587 2208 0.868 - - - - - - - - - 0.868 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
71. CLNS1A ENSGALG00000008574 25675 0.867 - - - - - - 0.867 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
72. MRPS31 ENSGALG00000017033 9287 0.865 - - - - - - - - - 0.865 mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
73. ENSGALG00000028992 ENSGALG00000028992 185077 0.863 - - - - - - - - - 0.863
74. C11H16ORF80 C11H16ORF80 18673 0.862 - - - - - - 0.862 - - -
75. CHTF8 ENSGALG00000000632 7230 0.861 - - - - - - 0.861 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
76. KIF2C ENSGALG00000010120 8999 0.859 - - - - - - 0.859 - - - kinesin family member 2C, transcript variant X1
77. YWHAZ ENSGALG00000031387 84985 0.859 - - - - - - 0.859 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
78. SVIL ENSGALG00000007331 12032 0.859 - - - - - - - - - 0.859 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
79. PEX2 ENSGALG00000035752 4427 0.858 - - - - - - - - - 0.858 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
80. PGD ENSGALG00000002797 15115 0.857 - - - - - - - - - 0.857 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
81. CNTRL ENSGALG00000001513 1773 0.857 - - - - - - - - - 0.857 centriolin [Source:NCBI gene;Acc:417121]
82. C10orf118 C10orf118 762 0.856 - - - - - - - - - 0.856
83. RAD18 ENSGALG00000008368 7214 0.855 - - - - - - - - - 0.855 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
84. FREM3 ENSGALG00000020561 1824 0.855 - - - - - - - - - 0.855 FRAS1 related extracellular matrix 3
85. TMEM237 ENSGALG00000008381 1317 0.854 - - - - - - - - - 0.854 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
86. IDS ENSGALG00000009154 1177 0.852 - - - - - - - - - 0.852 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
87. AGGF1 ENSGALG00000004311 3011 0.851 - - - - - - - - - 0.851 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
88. TMEM68 ENSGALG00000031835 1691 0.851 - - - - - - - - - 0.851 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
89. RUVBL1 ENSGALG00000005931 9379 0.851 - - - - - - 0.851 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
90. MYH1D ENSGALG00000027323 365 0.851 - - - - - - - - - 0.851 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
91. FAM160B1 ENSGALG00000031404 3153 0.85 - - - - - - 0.850 - - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
92. COG5 ENSGALG00000042764 4205 0.85 - - - - - - - - - 0.850 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
93. MSI1 ENSGALG00000007227 2279 0.85 - - - - - - - - - 0.850 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
94. DCAF7 ENSGALG00000000510 8681 0.85 - - - - - - 0.850 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
95. TRPC4AP ENSGALG00000003147 3967 0.85 - - - - - - - - - 0.850 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
96. PPP1R2 ENSGALG00000029789 11594 0.85 - - - - - - 0.850 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
97. RABGGTB ENSGALG00000011388 11654 0.849 - - - - - - 0.849 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
98. TOR1AIP1 ENSGALG00000029238 5843 0.848 - - - - - - 0.848 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
99. RWDD2B ENSGALG00000015807 3601 0.848 - - - - - - - - - 0.848 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
100. MPP5 ENSGALG00000009581 724 0.848 - - - - - - - - - 0.848 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]

There are 983 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA