Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMSB4X

Gene Name Gene ID Reads Annotation
TMSB4X ENSGALG00000026383 293046 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]











Genes with expression patterns similar to TMSB4X

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMSB4X ENSGALG00000026383 293046 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus thymosin beta 4, X-linked (TMSB4X), mRNA. [Source:RefSeq mRNA;Acc:NM_001001315]
2. TAGLN3 ENSGALG00000015379 7865 2.289 - - - - - 0.826 - - 0.729 0.734 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
3. MIF ENSGALG00000006326 109683 1.584 - - - - - 0.832 - - 0.752 - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
4. LDHB ENSGALG00000035836 169726 1.547 - - - - - 0.788 - - 0.759 - lactate dehydrogenase B [Source:NCBI gene;Acc:373997]
5. SYNPR ENSGALG00000007284 1368 1.501 - - - - - - - - 0.749 0.752 synaptoporin [Source:NCBI gene;Acc:396359]
6. DPYSL4 ENSGALG00000010490 3431 1.48 - - - - - - - - 0.772 0.708 dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
7. TUBB2C TUBB2C 44249 1.47 - - - - - 0.760 - - 0.710 -
8. JSC JSC 7982 0.848 - - - - - 0.848 - - - -
9. HSPA8 ENSGALG00000006512 124825 0.846 - - - - - 0.846 - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
10. SHFM1 SHFM1 51606 0.839 - - - - - 0.839 - - - -
11. RPL6 ENSGALG00000004818 253572 0.829 - - - - - - 0.829 - - - ribosomal protein L6 [Source:NCBI gene;Acc:373957]
12. SLC25A6 ENSGALG00000016691 76738 0.822 - - - - - - 0.822 - - - solute carrier family 25 member 6 [Source:NCBI gene;Acc:374072]
13. RAN ENSGALG00000002569 197034 0.819 - - - - - 0.819 - - - - RAN, member RAS oncogene family [Source:NCBI gene;Acc:396193]
14. PGK1 ENSGALG00000007936 70101 0.819 - - - - - 0.819 - - - - phosphoglycerate kinase 1 [Source:NCBI gene;Acc:395833]
15. KERA ENSGALG00000011270 4204 0.819 - - - - - 0.819 - - - - keratocan [Source:NCBI gene;Acc:373995]
16. AHSA1 ENSGALG00000010463 15252 0.816 - - - - - 0.816 - - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
17. SKP1 ENSGALG00000006474 37807 0.813 - - - - - - 0.813 - - - S-phase kinase-associated protein 1 [Source:NCBI gene;Acc:416319]
18. IMMT ENSGALG00000015783 25009 0.813 - - - - - - 0.813 - - - inner membrane mitochondrial protein [Source:NCBI gene;Acc:422912]
19. NPM3 ENSGALG00000032329 21138 0.811 - - - - - 0.811 - - - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
20. EIF4A3 ENSGALG00000008530 53964 0.808 - - - - - - 0.808 - - - eukaryotic translation initiation factor 4A3 [Source:NCBI gene;Acc:416704]
21. MRPL3 ENSGALG00000040873 21053 0.802 - - - - - - 0.802 - - - mitochondrial ribosomal protein L3 [Source:NCBI gene;Acc:420686]
22. HSP90AA1 ENSGALG00000033212 55740 0.801 - - - - - 0.801 - - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
23. YWHAH ENSGALG00000006743 29828 0.798 - - - - - - - - 0.798 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
24. PPP6R3 ENSGALG00000007037 10919 0.798 - - - - - - 0.798 - - - protein phosphatase 6 regulatory subunit 3 [Source:NCBI gene;Acc:423116]
25. NDUFA2 ENSGALG00000040626 27899 0.798 - - - - - - 0.798 - - - NADH:ubiquinone oxidoreductase subunit A2 [Source:NCBI gene;Acc:768860]
26. LOC107057078 ENSGALG00000004725 28489 0.797 - - - - - - 0.797 - - - acyl-CoA dehydrogenase family member 10-like, transcript variant X7
27. NAT10 ENSGALG00000014573 12754 0.794 - - - - - - 0.794 - - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
28. HES6 ENSGALG00000028415 4830 0.793 - - - - - - 0.793 - - - hes family bHLH transcription factor 6
29. ENSGALG00000012451 ENSGALG00000012451 7912 0.793 - - - - - - 0.793 - - -
30. HUNK ENSGALG00000015879 7227 0.792 - - - - - - 0.792 - - - hormonally up-regulated Neu-associated kinase [Source:HGNC Symbol;Acc:HGNC:13326]
31. MYL4 ENSGALG00000000585 16982 0.792 - - - - - 0.792 - - - - myosin, light chain 4, alkali; atrial, embryonic [Source:NCBI gene;Acc:396472]
32. SNTB1 ENSGALG00000034528 3907 0.791 - - - - - - 0.791 - - - syntrophin beta 1 [Source:NCBI gene;Acc:404774]
33. ITGB5 ENSGALG00000029766 5978 0.791 - - - - - - 0.791 - - - integrin subunit beta 5 [Source:NCBI gene;Acc:395142]
34. DOCK1 ENSGALG00000042259 5438 0.79 - - - - - - 0.790 - - - dedicator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:2987]
35. CNBP 42704 0.789 - - - - - 0.789 - - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
36. CCT5 ENSGALG00000013041 56190 0.787 - - - - - 0.787 - - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
37. MAP2 ENSGALG00000002789 6597 0.786 - - - - - - - - 0.786 - microtubule associated protein 2, transcript variant X33
38. MARCKSL1 ENSGALG00000032335 88728 0.785 - - - - - - - - 0.785 - MARCKS like 1 [Source:NCBI gene;Acc:770764]
39. GPM6A ENSGALG00000043480 2133 0.784 - - - - - - - - 0.784 - glycoprotein M6A [Source:NCBI gene;Acc:422569]
40. TRNT1 ENSGALG00000017368 11932 0.783 - - - - - 0.783 - - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
41. MDH2 ENSGALG00000001949 68323 0.782 - - - - - 0.782 - - - - malate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:6971]
42. MRPL20 ENSGALG00000001542 28764 0.781 - - - - - 0.781 - - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
43. NGFR ENSGALG00000035950 13452 0.779 - - - - - - - - 0.779 - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
44. HSP90AB1 ENSGALG00000010175 77935 0.779 - - - - - 0.779 - - - - heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
45. RPL27A ENSGALG00000005948 363481 0.778 - - - - - - - - 0.778 - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
46. PRTG ENSGALG00000037336 34665 0.777 - - - - - 0.777 - - - - protogenin [Source:NCBI gene;Acc:415407]
47. HMGCS1 ENSGALG00000014862 2846 0.769 - - - - - - - - 0.769 - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
48. TUBB2B ENSGALG00000012821 41535 0.769 - - - - - - - - 0.769 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
49. RGMA ENSGALG00000039173 12874 0.768 - - - - - - - - 0.768 - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
50. NUP43 ENSGALG00000012387 11779 0.767 - - - - - - 0.767 - - - nucleoporin 43 [Source:HGNC Symbol;Acc:HGNC:21182]
51. NOLC1 ENSGALG00000041124 12765 0.767 - - - - - 0.767 - - - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
52. UCH-L1 UCH-L1 12697 0.765 - - - - - - - - 0.765 -
53. SMOC1 ENSGALG00000009415 2403 0.765 - - - - - 0.765 - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
54. NELL2 ENSGALG00000009601 4243 0.756 - - - - - 0.756 - - - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
55. ALCAM ENSGALG00000015348 14283 0.755 - - - - - 0.755 - - - - activated leukocyte cell adhesion molecule [Source:NCBI gene;Acc:396092]
56. KPNA2 ENSGALG00000003584 76058 0.754 - - - - - - 0.754 - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
57. ACAT2 ENSGALG00000011659 12825 0.752 - - - - - - - - 0.752 - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
58. HOXA7 ENSGALG00000026989 6746 0.751 - - - - - - - - 0.751 - homeobox A7 [Source:NCBI gene;Acc:395290]
59. HEY1 ENSGALG00000035031 8795 0.75 - - - - - - - - 0.750 - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
60. DDX5 ENSGALG00000003532 75471 0.75 - - - - - - 0.750 - - - DEAD-box helicase 5 [Source:NCBI gene;Acc:395629]
61. HSPD1 ENSGALG00000008094 40870 0.748 - - - - - 0.748 - - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
62. TTYH2 ENSGALG00000026940 15628 0.744 - - - - - - - - 0.744 - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
63. ELAVL4 ENSGALG00000010533 4978 0.744 - - - - - - - - 0.744 - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
64. SSB ENSGALG00000009677 25335 0.744 - - - - - 0.744 - - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
65. FABP5 ENSGALG00000041344 3984 0.743 - - - - - 0.743 - - - - fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
66. MMP17 3885 0.741 - - - - - - - - 0.741 - matrix metallopeptidase 17
67. GSTO1 ENSGALG00000008409 7561 0.74 - - - - - 0.740 - - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
68. LYAR ENSGALG00000015000 10756 0.736 - - - - - 0.736 - - - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
69. INA ENSGALG00000028238 208 0.733 - - - - - - - - 0.733 - internexin neuronal intermediate filament protein alpha
70. LECT1 LECT1 12694 0.727 - - - - - 0.727 - - - -
71. HSPE1 ENSGALG00000009070 87567 0.727 - - - - - 0.727 - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
72. FABP7 ENSGALG00000038933 6780 0.727 - - - - - 0.727 - - - - fatty acid binding protein 7 [Source:NCBI gene;Acc:396246]
73. GPR176 ENSGALG00000009619 5804 0.726 - - - - - 0.726 - - - - G protein-coupled receptor 176 [Source:HGNC Symbol;Acc:HGNC:32370]
74. MURC 3759 0.726 - - - - - 0.726 - - - - muscle related coiled-coil protein
75. CRMP1B CRMP1B 18633 0.725 - - - - - - - - - 0.725
76. RTN1 ENSGALG00000012006 2438 0.724 - - - - - - - - 0.724 - reticulon 1 [Source:NCBI gene;Acc:378791]
77. RPS6 ENSGALG00000015082 307412 0.723 - - - - - - 0.723 - - - ribosomal protein S6 [Source:NCBI gene;Acc:396148]
78. ATP6V1E1 ENSGALG00000013036 13497 0.721 - - - - - - 0.721 - - - ATPase H+ transporting V1 subunit E1 [Source:NCBI gene;Acc:418162]
79. MSMO1 ENSGALG00000009560 6928 0.721 - - - - - 0.721 - - - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
80. GABRA3 ENSGALG00000007269 985 0.718 - - - - - - - - 0.718 - gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
81. TCP1 ENSGALG00000011637 73216 0.718 - - - - - - - - 0.718 - t-complex 1 [Source:NCBI gene;Acc:421586]
82. NSG1 ENSGALG00000015010 5829 0.717 - - - - - - - - 0.717 - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
83. RUSC2 ENSGALG00000002371 272 0.717 - - - - - - - - 0.717 - RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]
84. PDXP ENSGALG00000023131 2663 0.716 - - - - - - - - 0.716 - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
85. H2AFZ ENSGALG00000014023 117824 0.715 - - - - - 0.715 - - - - H2A histone family, member Z [Source:NCBI gene;Acc:426361]
86. SRM ENSGALG00000003039 8331 0.712 - - 0.712 - - - - - - - spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
87. SMPD3 ENSGALG00000034950 4335 0.709 - - - - - - - - 0.709 - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
88. EYA2 ENSGALG00000004508 939 0.709 - - - - - 0.709 - - - - Gallus gallus EYA transcriptional coactivator and phosphatase 2 (EYA2), mRNA. [Source:RefSeq mRNA;Acc:NM_204915]
89. STMN3 ENSGALG00000006130 151 0.709 - - - - - - - - 0.709 - stathmin 3 [Source:NCBI gene;Acc:419263]
90. SULF1 ENSGALG00000039553 5115 0.708 - - - - - 0.708 - - - - sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]
91. CIRBP ENSGALG00000030918 309258 0.707 - - - - - 0.707 - - - - cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
92. NKAIN3 NKAIN3 802 0.707 - - - - - - - - 0.707 -
93. EBF3 ENSGALG00000010461 1373 0.706 - - - - - - - - 0.706 - early B cell factor 3 [Source:HGNC Symbol;Acc:HGNC:19087]
94. GRM4 ENSGALG00000002840 2250 0.706 - - - - - 0.706 - - - - glutamate receptor, metabotropic 4, transcript variant X2
95. BAI1 BAI1 235 0.705 - - - - - - - - 0.705 -
96. NCAM1 ENSGALG00000007839 19929 0.704 - - - - - 0.704 - - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
97. PKM ENSGALG00000001992 93960 0.703 - - - - - - - - 0.703 - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
98. SERPINF1 ENSGALG00000003015 5123 0.703 - - - - - 0.703 - - - - serpin family F member 1 [Source:NCBI gene;Acc:417561]
99. KDM5B ENSGALG00000038948 50645 0.702 - - - - - 0.702 - - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
100. NTN3 ENSGALG00000029072 1368 0.701 - - - - - - - - - 0.701 netrin 1 [Source:NCBI gene;Acc:396387]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA