Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TMOD3

Gene Name Gene ID Reads Annotation
TMOD3 ENSGALG00000004710 2820 tropomodulin 3 [Source:NCBI gene;Acc:415421]











Genes with expression patterns similar to TMOD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMOD3 ENSGALG00000004710 2820 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - tropomodulin 3 [Source:NCBI gene;Acc:415421]
2. SLC39A6 ENSGALG00000013209 1754 1.583 - - 0.738 - - - 0.845 - - - solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
3. C12orf5 C12orf5 1463 1.542 - - - - - - 0.832 0.710 - -
4. ZBTB10 ENSGALG00000034376 3271 1.512 - - 0.754 - - - - 0.758 - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
5. ROCK1 ENSGALG00000014922 4020 1.434 - - 0.712 - - - - 0.722 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
6. GGT7 ENSGALG00000001062 476 1.413 - - 0.703 - - - 0.710 - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
7. USP8 ENSGALG00000005894 4499 0.817 - - 0.817 - - - - - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
8. SP3 ENSGALG00000031796 8997 0.809 - - 0.809 - - - - - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
9. TPGS2 ENSGALG00000026547 1967 0.807 - - - - 0.807 - - - - - tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
10. AVL9 ENSGALG00000041568 1558 0.806 - - - - - - - 0.806 - - AVL9 cell migration associated [Source:HGNC Symbol;Acc:HGNC:28994]
11. CCNI ENSGALG00000011457 3203 0.795 - - 0.795 - - - - - - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
12. NPM1 ENSGALG00000002197 24109 0.793 - - 0.793 - - - - - - - nucleophosmin [Source:NCBI gene;Acc:396203]
13. MRPS33 ENSGALG00000028879 17966 0.791 - - 0.791 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
14. SPOPL ENSGALG00000012380 2583 0.79 - - - - - - 0.790 - - - speckle type BTB/POZ protein like [Source:HGNC Symbol;Acc:HGNC:27934]
15. TIAR TIAR 2471 0.789 - - 0.789 - - - - - - -
16. MBSP MBSP 5634 0.788 - - 0.788 - - - - - - -
17. ZCCHC8 ENSGALG00000004486 3201 0.782 - - 0.782 - - - - - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
18. ATPBD4 ATPBD4 1823 0.782 - - - - - - - 0.782 - -
19. MYCBP2 ENSGALG00000016915 2374 0.781 - - 0.781 - - - - - - - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
20. SCFD1 ENSGALG00000009916 5756 0.781 - - - - 0.781 - - - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
21. NEMF ENSGALG00000012263 2250 0.779 - - 0.779 - - - - - - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
22. CPSF3 ENSGALG00000016424 342 0.779 - - 0.779 - - - - - - - cleavage and polyadenylation specific factor 3 [Source:HGNC Symbol;Acc:HGNC:2326]
23. ZC3H11A ENSGALG00000000541 2712 0.779 - - 0.779 - - - - - - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
24. UBE2E1 ENSGALG00000011286 5483 0.777 - - - - - - - 0.777 - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
25. TCP11L1 ENSGALG00000011688 2427 0.777 - - - - - - - 0.777 - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
26. DEGS1 ENSGALG00000009330 3599 0.776 - - - - - - 0.776 - - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
27. NF1 ENSGALG00000005660 1610 0.775 - - 0.775 - - - - - - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
28. APTX ENSGALG00000001954 692 0.774 - - - - 0.774 - - - - - aprataxin [Source:NCBI gene;Acc:395173]
29. ELF1 ENSGALG00000016947 2769 0.773 - - - - - - - 0.773 - - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
30. EMC8 ENSGALG00000005744 9422 0.773 - - - - - - 0.773 - - - ER membrane protein complex subunit 8
31. SUCLG2 ENSGALG00000007652 9688 0.771 - - 0.771 - - - - - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
32. SEPHS1 ENSGALG00000014575 10701 0.771 - - 0.771 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
33. HSPH1 ENSGALG00000017077 735 0.771 - - - - 0.771 - - - - - heat shock protein family H (Hsp110) member 1 [Source:NCBI gene;Acc:418917]
34. EXOSC1 ENSGALG00000039917 5259 0.769 - - - - - - 0.769 - - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
35. STAMBP ENSGALG00000042555 1362 0.767 - - 0.767 - - - - - - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
36. CDC5L ENSGALG00000016704 22893 0.765 - - 0.765 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
37. PHF3 ENSGALG00000016267 4148 0.764 - - 0.764 - - - - - - - PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]
38. ATF7IP ENSGALG00000011814 1571 0.764 - - 0.764 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
39. ENSGALG00000006865 ENSGALG00000006865 307 0.763 - - - - 0.763 - - - - -
40. DNAJB12 ENSGALG00000034104 3021 0.763 - - - - - - 0.763 - - - DnaJ heat shock protein family (Hsp40) member B12 [Source:NCBI gene;Acc:423707]
41. RNF214 ENSGALG00000036993 3729 0.762 - - 0.762 - - - - - - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
42. SPCS3 ENSGALG00000010839 19106 0.762 - - 0.762 - - - - - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
43. ARID3A ENSGALG00000026231 867 0.76 - - 0.760 - - - - - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
44. GTF3C1 ENSGALG00000007387 5788 0.76 - - - - 0.760 - - - - - general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
45. PAPD5 2186 0.76 - - 0.760 - - - - - - - poly(A) RNA polymerase D5, non-canonical
46. MCPH1 ENSGALG00000016332 2097 0.76 - - - - - - 0.760 - - - microcephalin 1 [Source:NCBI gene;Acc:100125976]
47. FAR-1 FAR-1 1855 0.759 - - 0.759 - - - - - - -
48. MAPRE3 ENSGALG00000031726 191 0.758 - - 0.758 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
49. SLK ENSGALG00000008318 2220 0.758 - - 0.758 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
50. LPAR4 ENSGALG00000004121 2543 0.758 - - - - - - - 0.758 - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
51. SBNO1 ENSGALG00000003392 6731 0.757 - - 0.757 - - - - - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
52. TPP2 ENSGALG00000016865 7509 0.755 - - 0.755 - - - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
53. STXBP6 ENSGALG00000009847 224 0.755 - - 0.755 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
54. CGNL1 ENSGALG00000004294 1177 0.755 - - 0.755 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
55. DAB1 ENSGALG00000010857 1085 0.755 - - - - 0.755 - - - - - DAB1, reelin adaptor protein [Source:NCBI gene;Acc:374083]
56. FAM210A ENSGALG00000013887 1828 0.754 - - - - - - 0.754 - - - family with sequence similarity 210 member A [Source:NCBI gene;Acc:421045]
57. CDCA7L ENSGALG00000035978 2112 0.754 - - 0.754 - - - - - - - cell division cycle associated 7 like [Source:NCBI gene;Acc:420608]
58. FTD FTD 3041 0.753 - - 0.753 - - - - - - -
59. BBX ENSGALG00000015353 1281 0.753 - - 0.753 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
60. HSF2BP ENSGALG00000016202 1696 0.752 - - - - - - 0.752 - - - heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:HGNC:5226]
61. PGGT1B ENSGALG00000008197 1881 0.752 - - - - - - 0.752 - - - protein geranylgeranyltransferase type I subunit beta [Source:HGNC Symbol;Acc:HGNC:8895]
62. PFDN1 ENSGALG00000000946 18822 0.752 - - 0.752 - - - - - - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
63. RALGDS ENSGALG00000003412 4478 0.751 - - 0.751 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
64. GANC ENSGALG00000009036 731 0.751 - - - - - - 0.751 - - - glucosidase alpha, neutral C [Source:NCBI gene;Acc:423232]
65. RALGAPA2 240 0.751 - - 0.751 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
66. RSRC1 ENSGALG00000009669 5829 0.751 - - - - - - - 0.751 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
67. TMEM242 ENSGALG00000013689 377 0.75 - - 0.750 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
68. PARD3B ENSGALG00000042645 2893 0.75 - - 0.750 - - - - - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
69. SMG1 ENSGALG00000006829 1875 0.75 - - - - - - - 0.750 - - SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]
70. CCAR1 ENSGALG00000004108 13219 0.75 - - 0.750 - - - - - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
71. MARS2 ENSGALG00000004019 1881 0.749 - - - - - - 0.749 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25133]
72. TPM4 ENSGALG00000002563 15621 0.748 - - 0.748 - - - - - - - tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
73. ABCE1 ENSGALG00000009961 958 0.748 - - 0.748 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
74. PLEKHS1 ENSGALG00000020679 161 0.748 - - - - - - 0.748 - - - pleckstrin homology domain containing S1 [Source:HGNC Symbol;Acc:HGNC:26285]
75. CAPN5 ENSGALG00000040478 2414 0.747 - - - - 0.747 - - - - - calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]
76. BAG5 ENSGALG00000031062 4498 0.747 - - 0.747 - - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
77. RECQL ENSGALG00000013174 1323 0.747 - - 0.747 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
78. TTC12 1384 0.747 - - - - - - 0.747 - - - tetratricopeptide repeat domain 12, transcript variant X4
79. DSL1 DSL1 113 0.746 - - - - 0.746 - - - - -
80. CCDC107 ENSGALG00000021897 1223 0.746 - - - - 0.746 - - - - - coiled-coil domain containing 107
81. MED7 ENSGALG00000003870 4244 0.746 - - - - 0.746 - - - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
82. DYNLRB2 ENSGALG00000005402 630 0.745 - - - - - - 0.745 - - - dynein light chain roadblock-type 2 [Source:NCBI gene;Acc:415802]
83. PTCD3 ENSGALG00000015773 3059 0.745 - - 0.745 - - - - - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
84. TPD52 ENSGALG00000040167 9891 0.745 - - 0.745 - - - - - - - tumor protein D52 [Source:NCBI gene;Acc:770339]
85. SPDL1 ENSGALG00000001942 4403 0.744 - - 0.744 - - - - - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
86. GSR ENSGALG00000037781 8043 0.744 - - - - - - - - 0.744 - glutathione-disulfide reductase [Source:HGNC Symbol;Acc:HGNC:4623]
87. POGZ ENSGALG00000036365 4056 0.743 - - 0.743 - - - - - - - pogo transposable element with ZNF domain, transcript variant X2
88. TFAP2C ENSGALG00000007690 768 0.743 - - 0.743 - - - - - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
89. CTIF ENSGALG00000035912 1705 0.743 - - - - - - - 0.743 - - cap binding complex dependent translation initiation factor [Source:HGNC Symbol;Acc:HGNC:23925]
90. C18orf8 C18orf8 1512 0.742 - - 0.742 - - - - - - -
91. GBE1 ENSGALG00000042771 2323 0.742 - - - - - - - 0.742 - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
92. RAB3IP ENSGALG00000009959 1652 0.742 - - 0.742 - - - - - - - RAB3A interacting protein, transcript variant X1
93. GTF2A2 ENSGALG00000003793 5957 0.742 - - - - - - 0.742 - - - general transcription factor IIA subunit 2 [Source:NCBI gene;Acc:770910]
94. NCKIPSD ENSGALG00000005713 2087 0.742 - - - - - - - 0.742 - - NCK interacting protein with SH3 domain [Source:HGNC Symbol;Acc:HGNC:15486]
95. RNF20 ENSGALG00000015548 7199 0.742 - - 0.742 - - - - - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
96. SAP130 ENSGALG00000002070 9814 0.742 - - - - - - 0.742 - - - Sin3A associated protein 130 [Source:NCBI gene;Acc:424756]
97. RUFY2 1442 0.741 - - - - 0.741 - - - - - RUN and FYVE domain containing 2, transcript variant X1
98. ZNRF1 ENSGALG00000029017 1429 0.741 - - 0.741 - - - - - - - zinc and ring finger 1 [Source:HGNC Symbol;Acc:HGNC:18452]
99. TOP2A ENSGALG00000003922 7726 0.741 - - 0.741 - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
100. PLEKHG1 ENSGALG00000012395 2708 0.741 - - - - 0.741 - - - - - pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]

There are 204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA