Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMF1

Gene Name Gene ID Reads Annotation
TMF1 ENSGALG00000013408 3344 TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]











Genes with expression patterns similar to TMF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMF1 ENSGALG00000013408 3344 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
2. RALGDS ENSGALG00000003412 4478 1.984 - - - - 0.986 - 0.998 - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
3. SEPHS1 ENSGALG00000014575 10701 1.942 - - - - 0.949 - 0.993 - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
4. LMAN2 ENSGALG00000033232 11740 1.94 - - - - 0.984 - - 0.956 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
5. UBE2D3 ENSGALG00000012311 39831 1.891 - - - - 0.935 - 0.956 - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
6. STRAP ENSGALG00000013092 13100 1.806 - - - - - - 0.993 0.813 - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
7. SMARCB1 ENSGALG00000005983 20548 1.801 - - - - 0.917 - 0.884 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
8. CDH3 5050 1.776 - - - - 0.978 - - 0.798 - - cadherin 3
9. UMPS ENSGALG00000011770 11331 1.592 - - - - 0.886 - - 0.706 - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
10. NR2F1 ENSGALG00000027907 25778 1.485 - - - - 0.702 - - 0.783 - - nuclear receptor subfamily 2 group F member 1 [Source:HGNC Symbol;Acc:HGNC:7975]
11. C10orf54 C10orf54 2444 0.999 - - - - - - 0.999 - - -
12. WWP1 ENSGALG00000041795 2291 0.999 - - - - - - 0.999 - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:420212]
13. ENSGALG00000027132 ENSGALG00000027132 1704 0.998 - - - - - - 0.998 - - -
14. LYN ENSGALG00000042321 3539 0.998 - - - - - - 0.998 - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
15. C4H8ORF40 C4H8ORF40 6145 0.998 - - - - - - 0.998 - - -
16. ANO5 ENSGALG00000003748 3959 0.998 - - - - - - 0.998 - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
17. TRAPPC8 ENSGALG00000015157 4308 0.998 - - - - - - 0.998 - - - trafficking protein particle complex 8, transcript variant X5
18. CAMK2D ENSGALG00000041635 3384 0.998 - - - - - - 0.998 - - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
19. RBM24 ENSGALG00000012712 4138 0.998 - - - - - - 0.998 - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
20. VPS13B 2293 0.998 - - - - - - 0.998 - - - vacuolar protein sorting 13 homolog B
21. C5H15ORF57 C5H15ORF57 4113 0.998 - - - - - - 0.998 - - -
22. PRKX ENSGALG00000042759 2418 0.998 - - - - - - 0.998 - - - protein kinase X-linked [Source:HGNC Symbol;Acc:HGNC:9441]
23. SGK1 ENSGALG00000013971 2608 0.998 - - - - - - 0.998 - - - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
24. ARG2 ENSGALG00000009519 19523 0.997 - - - - - - 0.997 - - - arginase 2 [Source:NCBI gene;Acc:423272]
25. RPP38 ENSGALG00000008794 1057 0.997 - - - - - - - 0.997 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
26. EIF2A ENSGALG00000010401 2201 0.996 - - - - - - - 0.996 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
27. DIABLO ENSGALG00000004412 9499 0.996 - - - - - - 0.996 - - - diablo IAP-binding mitochondrial protein, transcript variant X3
28. RND3 ENSGALG00000026313 9271 0.996 - - - - - - 0.996 - - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
29. ZNF462 ENSGALG00000015451 12653 0.996 - - - - - - 0.996 - - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
30. ACSBG2 ENSGALG00000001749 1681 0.995 - - - - - - - 0.995 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
31. APC ENSGALG00000000220 1266 0.995 - - - - - - - 0.995 - - APC, WNT signaling pathway regulator, transcript variant X12
32. SLC16A2 ENSGALG00000007748 446 0.995 - - - - - - - 0.995 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
33. CTTN ENSGALG00000007700 709 0.995 - - - - - - - 0.995 - - cortactin [Source:NCBI gene;Acc:396455]
34. CCM2 ENSGALG00000005612 323 0.995 - - - - - - - 0.995 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
35. SMG7 ENSGALG00000004667 707 0.995 - - - - 0.995 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
36. CA9 ENSGALG00000021340 1431 0.995 - - - - - - - 0.995 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
37. RAB35 ENSGALG00000007308 6300 0.995 - - - - - - - 0.995 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
38. TBC1D32 ENSGALG00000014876 681 0.995 - - - - - - - 0.995 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
39. NPHP3 ENSGALG00000034586 1465 0.995 - - - - - - - 0.995 - - nephrocystin 3, transcript variant X1
40. MED8 ENSGALG00000009993 3095 0.995 - - - - 0.995 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
41. AP1S2 ENSGALG00000016551 421 0.995 - - - - - - - 0.995 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
42. RAB9A ENSGALG00000016579 3262 0.995 - - - - - - - 0.995 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
43. KIF23 ENSGALG00000008095 9919 0.995 - - - - - - 0.995 - - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
44. PREP2 PREP2 238 0.995 - - - - 0.995 - - - - -
45. GTF2H1 ENSGALG00000042340 1553 0.995 - - - - 0.995 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
46. SLC38A11 ENSGALG00000011052 386 0.995 - - - - - - - 0.995 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
47. ENSGALG00000012564 ENSGALG00000012564 426 0.995 - - - - - - - 0.995 - -
48. MSC ENSGALG00000037777 1109 0.994 - - - - - - - 0.994 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
49. PRDM4 ENSGALG00000012619 876 0.994 - - - - 0.994 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
50. MAN2A2 ENSGALG00000033790 2717 0.994 - - - - - - - 0.994 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
51. C3H6ORF154 C3H6ORF154 1078 0.994 - - - - - - - 0.994 - -
52. RAMP3 ENSGALG00000037246 1187 0.994 - - - - 0.994 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
53. BRF1 ENSGALG00000011705 3406 0.994 - - - - 0.994 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
54. YARS ENSGALG00000003563 11093 0.994 - - - - 0.994 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
55. LONRF2 ENSGALG00000016768 193 0.994 - - - - - - - 0.994 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
56. PIGG ENSGALG00000015349 314 0.994 - - - - - - - 0.994 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
57. HES5 ENSGALG00000001141 6514 0.994 - - - - - - - 0.994 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
58. SDCBP ENSGALG00000015436 1228 0.994 - - - - 0.994 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
59. MSANTD1 ENSGALG00000015628 154 0.994 - - - - - - - 0.994 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
60. KIAA1191 ENSGALG00000003370 2599 0.994 - - - - - - - 0.994 - - KIAA1191 [Source:NCBI gene;Acc:416230]
61. RBM6 ENSGALG00000035578 1690 0.994 - - - - 0.994 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
62. IRF2BPL ENSGALG00000041616 2835 0.994 - - - - - - - 0.994 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
63. ANKRD9 ENSGALG00000011376 525 0.994 - - - - 0.994 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
64. RGCC ENSGALG00000016954 1282 0.994 - - - - - - - 0.994 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
65. TATDN1 ENSGALG00000041072 1585 0.994 - - - - - - - 0.994 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
66. GOLGA1 ENSGALG00000001025 334 0.994 - - - - - - - 0.994 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
67. USP54 ENSGALG00000005232 2749 0.994 - - - - - - - 0.994 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
68. ITPR1 ENSGALG00000008294 1226 0.994 - - - - - - - 0.994 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
69. OXSR1 ENSGALG00000005979 2905 0.993 - - - - - - - 0.993 - - oxidative stress responsive 1
70. LZIC ENSGALG00000002616 9052 0.993 - - - - 0.993 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
71. UTP20 ENSGALG00000011643 3012 0.993 - - - - - - - 0.993 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
72. PTK2B ENSGALG00000016564 406 0.993 - - - - 0.993 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
73. ASAP2 ENSGALG00000016419 1393 0.993 - - - - 0.993 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
74. USP25 ENSGALG00000015693 2567 0.993 - - - - - - - 0.993 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
75. LPAR1 ENSGALG00000015729 3874 0.992 - - - - - - - 0.992 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
76. SAP30 ENSGALG00000036252 2032 0.992 - - - - 0.992 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
77. CCT8 ENSGALG00000015821 12161 0.992 - - - - - - 0.992 - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
78. TF ENSGALG00000006453 14007 0.992 - - - - - - 0.992 - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
79. PHTF1 ENSGALG00000001845 3276 0.992 - - - - 0.992 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
80. AP1M1 ENSGALG00000003959 31761 0.991 - - - - - - 0.991 - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
81. CHTOP ENSGALG00000042129 24112 0.991 - - - - - - 0.991 - - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
82. OGT ENSGALG00000005425 31074 0.991 - - - - - - 0.991 - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
83. SYNE1 ENSGALG00000013505 2324 0.991 - - - - 0.991 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
84. SNX14 ENSGALG00000015831 2554 0.991 - - - - 0.991 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
85. ATG13 ENSGALG00000008347 7374 0.991 - - - - - - - 0.991 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
86. BAHD1 ENSGALG00000033675 1779 0.991 - - - - 0.991 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
87. EDNRA ENSGALG00000010013 2472 0.99 - - - - 0.990 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
88. NDUFA4 ENSGALG00000025999 53323 0.99 - - - - - - 0.990 - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
89. PITHD1 ENSGALG00000003986 11470 0.99 - - - - 0.990 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
90. ENSGALG00000006569 ENSGALG00000006569 2169 0.99 - - - - 0.990 - - - - -
91. ETS1 ENSGALG00000001143 7284 0.99 - - - - 0.990 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
92. NDUFV1 ENSGALG00000042809 6222 0.99 - - - - 0.990 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
93. RAD54B ENSGALG00000043597 1699 0.989 - - - - 0.989 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
94. KIF11 ENSGALG00000030597 5528 0.989 - - - - 0.989 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
95. BET1 ENSGALG00000024485 2451 0.989 - - - - - - - 0.989 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
96. FBXO28 ENSGALG00000009331 2871 0.989 - - - - - - - 0.989 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
97. BFAR ENSGALG00000003111 1778 0.989 - - - - - - - 0.989 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
98. UBE2I ENSGALG00000006428 18421 0.989 - - - - - - 0.989 - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
99. WDFY1 ENSGALG00000005158 2512 0.989 - - - - - - - 0.989 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
100. RBM34 ENSGALG00000029915 5618 0.988 - - - - 0.988 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]

There are 320 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA