Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMEM56

Gene Name Gene ID Reads Annotation
TMEM56 ENSGALG00000005580 10 transmembrane protein 56 [Source:NCBI gene;Acc:424483]











Genes with expression patterns similar to TMEM56

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMEM56 ENSGALG00000005580 10 6 - - 1.000 1.000 1.000 1.000 1.000 1.000 - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
2. C15orf60 C15orf60 16 2 - - - 1.000 - 1.000 - - - -
3. C14orf159 C14orf159 7 1.986 - - - 1.000 - 0.986 - - - -
4. CHIC2 ENSGALG00000013931 21 1.938 - - 1.000 - - 0.938 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
5. YWHAG ENSGALG00000017358 203 1.759 - - - - - - 0.909 0.850 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:NCBI gene;Acc:427820]
6. YPEL4 ENSGALG00000007374 23 1.741 - - - - - - 0.925 0.816 - - yippee like 4 [Source:HGNC Symbol;Acc:HGNC:18328]
7. FADS2 ENSGALG00000007178 116 1.724 - - - - - - 0.840 0.884 - - fatty acid desaturase 2 [Source:NCBI gene;Acc:423122]
8. ASB15 ENSGALG00000008814 7 1.715 - - 0.715 - - 1.000 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
9. F8 ENSGALG00000005077 56 1.672 - - - 0.763 - 0.909 - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
10. ENSGALG00000005812 ENSGALG00000005812 40 1.647 - - 0.763 - - - - 0.884 - -
11. DECR2 ENSGALG00000002683 8 1.488 - - 0.757 - - 0.731 - - - - 2,4-dienoyl-CoA reductase 2 [Source:HGNC Symbol;Acc:HGNC:2754]
12. PUSL1 ENSGALG00000001701, ENSGALG00000001714 123 1.454 - - - - 0.709 0.745 - - - - pseudouridylate synthase-like 1, transcript variant X8
13. C1QTNF4 ENSGALG00000008080 3 1 - - - - - 1.000 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
14. MADCAM1 ENSGALG00000028341 6 1 - - 1.000 - - - - - - - mucosal vascular addressin cell adhesion molecule 1
15. ADAMTSL2 ENSGALG00000002955 5 1 - - 1.000 - - - - - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
16. SI ENSGALG00000009511 5 1 - - 1.000 - - - - - - - sucrase-isomaltase
17. C2CD3 ENSGALG00000017314 13 1 - - 1.000 - - - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
18. PRKCB ENSGALG00000037943 29 1 - - 1.000 - - - - - - - protein kinase C beta [Source:HGNC Symbol;Acc:HGNC:9395]
19. ZNF770 ENSGALG00000009817 27 1 - - 1.000 - - - - - - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
20. BFIV21 BFIV21 30 1 - - 1.000 - - - - - - -
21. PLCB2 ENSGALG00000042105 2 1 - - 1.000 - - - - - - - phospholipase C beta 2 [Source:HGNC Symbol;Acc:HGNC:9055]
22. LCT ENSGALG00000012260 21 1 - - - - - 1.000 - - - - lactase [Source:NCBI gene;Acc:424294]
23. VANGL2 ENSGALG00000030643 3 1 - - 1.000 - - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
24. CACNB4 ENSGALG00000035466 1 1 - - 1.000 - - - - - - - calcium voltage-gated channel auxiliary subunit beta 4 [Source:NCBI gene;Acc:374259]
25. DSEL ENSGALG00000042505 92 1 - - - - - - 1.000 - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
26. SLC51A ENSGALG00000007478 6 1 - - - - - 1.000 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
27. ENSGALG00000027164 ENSGALG00000027164 8 1 - - - 1.000 - - - - - -
28. AOAH ENSGALG00000035505 6 1 - - 1.000 - - - - - - - acyloxyacyl hydrolase [Source:HGNC Symbol;Acc:HGNC:548]
29. TMED11 ENSGALG00000015722 3 1 - - 1.000 - - - - - - - transmembrane emp24 protein transport domain containing 11 [Source:NCBI gene;Acc:422906]
30. SNORD53 SNORD53 1 1 - - 1.000 - - - - - - -
31. ENSGALG00000028957 ENSGALG00000028957 7 1 - - 1.000 - - - - - - -
32. B-BTN2 B-BTN2 1 1 - - - 1.000 - - - - - -
33. TMEM67 ENSGALG00000029287 2 1 - - 1.000 - - - - - - - transmembrane protein 67, transcript variant X2
34. SLC2A6 ENSGALG00000002982 1 1 - - 1.000 - - - - - - - solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]
35. ENSGALG00000016499 ENSGALG00000016499 4 1 - - - - - 1.000 - - - -
36. TRPV6 ENSGALG00000014746 3 1 - - - - - 1.000 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
37. ENSGALG00000008309 ENSGALG00000008309 7 1 - - - - - 1.000 - - - -
38. CABP4 1 1 - - 1.000 - - - - - - - calcium binding protein 4
39. ACKR4 ENSGALG00000041491 7 1 - - 1.000 - - - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
40. INPPL1 ENSGALG00000004336 3 1 - - 1.000 - - - - - - - inositol polyphosphate phosphatase like 1 [Source:HGNC Symbol;Acc:HGNC:6080]
41. RAB44 ENSGALG00000000544 6 1 - - 1.000 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
42. KCNAB2 ENSGALG00000037241 1 1 - - 1.000 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
43. PTPN3 ENSGALG00000022909 6 1 - - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
44. SYT12 ENSGALG00000004306 2 1 - - 1.000 - - - - - - - synaptotagmin 12 [Source:NCBI gene;Acc:422998]
45. CRYGS ENSGALG00000006574 9 1 - - 1.000 - - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
46. RGS13 ENSGALG00000026810 8 1 - - 1.000 - - - - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
47. PDX1 ENSGALG00000038454 1 1 - - - 1.000 - - - - - - pancreatic and duodenal homeobox 1
48. ENSGALG00000011006 ENSGALG00000011006 1 1 - - 1.000 - - - - - - -
49. MFSD4 MFSD4 1 1 - - 1.000 - - - - - - -
50. STEAP4 ENSGALG00000008997 8 1 - - 1.000 - - - - - - - STEAP4 metalloreductase [Source:HGNC Symbol;Acc:HGNC:21923]
51. ARHGEF17 6 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 17
52. ODF2L ENSGALG00000006804 10 1 - - 1.000 - - - - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
53. ENSGALG00000028667 ENSGALG00000028667 1 1 - - - 1.000 - - - - - -
54. COQ2 ENSGALG00000041294 25 1 - - - - - - 1.000 - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
55. PDE6B ENSGALG00000015373 1 1 - - 1.000 - - - - - - - Gallus gallus phosphodiesterase 6B (PDE6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318440]
56. ENSGALG00000002505 ENSGALG00000002505 1 1 - - 1.000 - - - - - - -
57. SNTB2 ENSGALG00000027482 44 1 - - - - - - 1.000 - - - syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
58. TOR1AIP2 ENSGALG00000004017 2 1 - - 1.000 - - - - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
59. TPP1 52 1 - - - 1.000 - - - - - - tripeptidyl peptidase 1
60. AIFM3 ENSGALG00000007720 28 1 - - - 1.000 - - - - - - apoptosis inducing factor, mitochondria associated 3 [Source:HGNC Symbol;Acc:HGNC:26398]
61. ENSGALG00000006582 ENSGALG00000006582 8 1 - - 1.000 - - - - - - -
62. ENSGALG00000025761 ENSGALG00000025761 6 1 - - 1.000 - - - - - - -
63. AMOTL1 ENSGALG00000017208 5 1 - - 1.000 - - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
64. CCDC178 6 1 - - 1.000 - - - - - - - coiled-coil domain containing 178, transcript variant X3
65. TRAF1 ENSGALG00000001583 3 1 - - - - - - 1.000 - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
66. CHRNB3 ENSGALG00000015384 9 1 - - - - - 1.000 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
67. TSNAXIP1 ENSGALG00000001533 9 1 - - 1.000 - - - - - - - translin associated factor X interacting protein 1, transcript variant X2
68. HIVEP3 ENSGALG00000027365 10 1 - - 1.000 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
69. NOS2 ENSGALG00000038096 7 1 - - 1.000 - - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
70. RNF165 ENSGALG00000031018 4 1 - - 1.000 - - - - - - - ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
71. ENSGALG00000021472 ENSGALG00000021472 2 1 - - - - - - 1.000 - - -
72. CDKN2C ENSGALG00000010537 2 1 - - 1.000 - - - - - - - cyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]
73. ARHGEF38 ENSGALG00000010577 1 1 - - 1.000 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
74. C1orf74 ENSGALG00000001378 39 1 - - - - - - 1.000 - - - chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
75. GABRA4 ENSGALG00000014202 1 1 - - - 1.000 - - - - - - gamma-aminobutyric acid type A receptor alpha4 subunit [Source:HGNC Symbol;Acc:HGNC:4078]
76. KCNJ5 ENSGALG00000001181 11 1 - - - - - - 1.000 - - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
77. SLC25A38 ENSGALG00000041275 1 1 - - 1.000 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
78. CPSF4L ENSGALG00000004441 4 1 - - - - - 1.000 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
79. ENSGALG00000011411 ENSGALG00000011411 1 1 - - 1.000 - - - - - - -
80. GRHL2 ENSGALG00000037687 3 1 - - 1.000 - - - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
81. ENSGALG00000027945 ENSGALG00000027945 2 1 - - - 1.000 - - - - - -
82. LOC396365 ENSGALG00000027219 7 1 - - - - - 1.000 - - - - preprogastrin
83. C6orf58 ENSGALG00000045522 2 1 - - - 1.000 - - - - - - chromosome 6 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:20960]
84. MLKL ENSGALG00000002766 1 1 - - 1.000 - - - - - - - mixed lineage kinase domain like pseudokinase [Source:HGNC Symbol;Acc:HGNC:26617]
85. P2RY4 ENSGALG00000004346 11 1 - - - 1.000 - - - - - - pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
86. TRPC5 ENSGALG00000007972 1 1 - - 1.000 - - - - - - - transient receptor potential cation channel subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:12337]
87. REM1 ENSGALG00000045602 4 1 - - - - - 1.000 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
88. ATP6V1C2 ENSGALG00000016446 3 1 - - 1.000 - - - - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]
89. HSD11B1b ENSGALG00000001369 1 1 - - - - - 1.000 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
90. LRRC9 2 1 - - 1.000 - - - - - - - leucine rich repeat containing 9
91. ENSGALG00000018621 ENSGALG00000018621 8 1 - - 1.000 - - - - - - -
92. DLL4 ENSGALG00000008514 3 1 - - 1.000 - - - - - - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
93. DUPD1 ENSGALG00000005019 18 1 - - 1.000 - - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
94. ENSGALG00000028137 ENSGALG00000028137 2 1 - - 1.000 - - - - - - -
95. TRAPPC9 ENSGALG00000042766 10 1 - - 1.000 - - - - - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
96. C17orf104 C17orf104 1 1 - - 1.000 - - - - - - -
97. SIK3 ENSGALG00000007144 18 1 - - - - - - 1.000 - - - SIK family kinase 3 [Source:HGNC Symbol;Acc:HGNC:29165]
98. TFAP4 ENSGALG00000027823 12 1 - - 1.000 - - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
99. MRAP2 ENSGALG00000015838 7 1 - - - - - 1.000 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
100. MEIG1 ENSGALG00000000451 12 1 - - 1.000 - - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA