Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TMEM55B_1

Gene Name Gene ID Reads Annotation
TMEM55B_1 TMEM55B_1 495










Genes with expression patterns similar to TMEM55B_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TMEM55B_1 TMEM55B_1 495 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.925 - - - - - 0.750 0.725 0.713 0.737 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
3. sprn ENSDARG00000056004 128 2.521 - - - - - 0.786 0.923 0.812 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
4. her4.3 ENSDARG00000070770 613 2.515 - - - - - 0.805 0.930 0.780 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
5. btbd3b ENSDARG00000087517 107 2.501 - - - - 0.727 0.848 0.926 - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
6. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.467 - - - - - 0.772 0.884 0.811 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
7. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 2.465 - - - - - 0.798 0.867 0.800 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
8. bhlhe22 ENSDARG00000058039 1673 2.441 - - - - - 0.886 0.829 0.726 - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
9. cxxc4 ENSDARG00000077817 197 2.359 - - - - - 0.701 0.902 0.756 - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
10. dpysl4 ENSDARG00000103490 534 2.337 - 0.732 - - - - 0.820 0.785 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
11. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.329 - - - - - 0.801 0.727 0.801 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
12. CABZ01029738.1 CABZ01029738.1 327 2.32 - - - - - 0.775 0.790 0.755 -
13. add2 ENSDARG00000074581 1402 2.311 - 0.700 - - - - 0.843 0.768 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
14. CABZ01111990.1 CABZ01111990.1 4374 2.307 - - - - - 0.742 0.806 0.759 -
15. igsf9ba ENSDARG00000033845 158 2.297 - - - - - 0.834 0.734 0.729 - immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]
16. gabrg2 ENSDARG00000053665 434 2.29 - - - - - 0.778 0.771 0.741 - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
17. tshz1 ENSDARG00000005026 1948 2.248 0.775 - - - - 0.741 0.732 - - teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
18. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.244 - - - - - 0.706 0.831 0.707 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
19. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.242 - - - - - 0.744 0.712 0.786 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
20. kcnc3a ENSDARG00000055855 1821 2.212 - 0.721 - - - 0.705 0.786 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
21. myo16 ENSDARG00000078582 714 2.203 - - - - - 0.704 0.788 - 0.711 myosin XVI [Source:ZFIN;Acc:ZDB-GENE-070912-470]
22. rbfox3 rbfox3 1443 2.144 - 0.719 - - - 0.705 0.720 - -
23. RAB39B RAB39B 482 1.811 - - - - - 0.882 0.929 - -
24. APBB3 ENSDARG00000053771 654 1.801 - - - - - 0.916 0.885 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
25. diras1a ENSDARG00000028066 126 1.77 - - - - - 0.807 0.963 - - DIRAS family, GTP-binding RAS-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5788]
26. her8.2 ENSDARG00000069675 315 1.77 - - - - - 0.797 0.973 - - hairy-related 8.2 [Source:ZFIN;Acc:ZDB-GENE-060815-4]
27. SMARCAD1 SMARCAD1 104 1.753 - - - - - 0.781 0.972 - -
28. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.752 - - - - - 0.818 0.934 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
29. CABZ01021538.1 CABZ01021538.1 67 1.746 - - - - - 0.792 0.954 - -
30. mnx2b ENSDARG00000030350 484 1.745 - - - - - 0.834 0.911 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
31. ctnnd2b ENSDARG00000003779 964 1.743 - - - - - 0.880 0.863 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
32. lgi1a ENSDARG00000020493 1218 1.742 - - - - - 0.813 0.929 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
33. slc35g2b ENSDARG00000045447 378 1.742 - - - - - 0.799 0.943 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
34. celf4 ENSDARG00000070045 1537 1.741 - - - - - - 0.890 0.851 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
35. zgc:100906 ENSDARG00000033599 344 1.736 - - - - - 0.864 0.872 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
36. dnajc6 ENSDARG00000079891 438 1.732 - - - - - - 0.944 0.788 - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
37. itm2ca ENSDARG00000043448 1265 1.73 - - - - - 0.844 0.886 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
38. clvs2 ENSDARG00000053122 1390 1.724 - - - - - - 0.935 0.789 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
39. evlb ENSDARG00000099720 245 1.72 - - - - - 0.839 0.881 - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
40. prdm8 ENSDARG00000025017 370 1.719 - - - - - 0.769 0.950 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
41. slc12a5b ENSDARG00000078187 329 1.713 - - - - - 0.798 0.915 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
42. prrt1 ENSDARG00000062208 368 1.711 - - - - - - 0.869 0.842 - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
43. SSX2IP SSX2IP 316 1.708 - - - - - 0.765 0.943 - -
44. st8sia5 ENSDARG00000036584 529 1.705 - - - - - - 0.932 0.773 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
45. pbx3a ENSDARG00000089262 97 1.703 - - - - - 0.843 0.860 - - pre-B-cell leukemia homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-031218-1]
46. ANO8 ANO8 380 1.699 - 0.759 - - - - 0.940 - -
47. pcloa ENSDARG00000063299 353 1.698 - - - - - 0.790 0.908 - - piccolo presynaptic cytomatrix protein a [Source:ZFIN;Acc:ZDB-GENE-030131-8115]
48. nhlh2 ENSDARG00000025495 1860 1.693 - - - - - 0.782 0.911 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
49. dlgap3 ENSDARG00000055459 85 1.691 - - - - - 0.738 0.953 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
50. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.69 - - - - - 0.795 0.895 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
51. PPP1R9B PPP1R9B 855 1.685 - - - - - 0.795 0.890 - -
52. LRFN5_1 LRFN5_1 96 1.684 - - - - - 0.815 0.869 - -
53. ATP6AP1L ATP6AP1L 164 1.683 - - - - - 0.734 0.949 - -
54. ccdc6b ENSDARG00000017595 828 1.681 - - - - - 0.794 0.887 - - coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
55. GADD45G_1 GADD45G_1 236 1.678 - - - - - - 0.945 0.733 -
56. rheb ENSDARG00000090213 1432 1.677 - - - - - 0.823 0.854 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
57. elavl3 ENSDARG00000014420 8644 1.676 - - - - - 0.796 0.880 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
58. kif5c ENSDARG00000076027 424 1.674 - - - - - 0.719 0.955 - - kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
59. nrsn1 ENSDARG00000111235 123 1.671 - - - - - - 0.851 0.820 - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
60. RNF208 ENSDARG00000078056 60 1.67 - - - - - 0.712 0.958 - - ring finger protein 208 [Source:HGNC Symbol;Acc:HGNC:25420]
61. hs3st1l2 ENSDARG00000035578 279 1.667 0.730 - - - - - 0.937 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
62. SLITRK4 ENSDARG00000079781 54 1.666 - - - - - 0.712 0.954 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
63. CR407704.1 CR407704.1 188 1.664 - - - - - 0.756 0.908 - -
64. BX511121.1 ENSDARG00000029997 1774 1.659 - - - - - 0.772 0.887 - -
65. sec22c ENSDARG00000063387 203 1.659 - - - - - 0.798 0.861 - - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
66. sv2bb ENSDARG00000060711 196 1.659 - - - - - 0.823 0.836 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
67. dpysl5b ENSDARG00000059311 600 1.657 - - - - - 0.841 0.816 - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
68. gng3 ENSDARG00000009553 2530 1.652 - - - - - 0.784 0.868 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
69. lgi2b ENSDARG00000069701, ENSDARG00000116343 66 1.647 - - - - - 0.771 0.876 - - leucine-rich repeat LGI family, member 2b [Source:ZFIN;Acc:ZDB-GENE-060217-3]
70. scn2b ENSDARG00000101713 796 1.645 - - - - - 0.771 0.874 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
71. clstn1 ENSDARG00000031720 5286 1.639 - - - - - 0.796 0.843 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
72. PRR12 PRR12 38 1.638 - - - - - 0.767 0.871 - -
73. si:dkey-271j15.3 ENSDARG00000091627 88 1.637 - - - - - 0.766 0.871 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
74. st18 663 1.637 - - - - - - 0.927 0.710 - suppression of tumorigenicity 18, zinc finger
75. cacng2a ENSDARG00000032565 99 1.635 - - - - - 0.883 0.752 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
76. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.635 - - - - - 0.750 0.885 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
77. UBL7 UBL7 197 1.635 0.718 - - - - - 0.917 - -
78. GADD45G GADD45G 382 1.634 - - - - - 0.704 0.930 - -
79. ckbb ENSDARG00000043257 3503 1.632 - - - - - 0.746 0.886 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
80. cspg5a ENSDARG00000069981 1699 1.629 - - - - - 0.758 0.871 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
81. nfatc1 ENSDARG00000036168 16 1.627 - 0.756 - - - - 0.871 - - nuclear factor of activated T cells 1 [Source:ZFIN;Acc:ZDB-GENE-060503-677]
82. lingo2 lingo2 67 1.622 - - - - - 0.704 0.918 - -
83. CLIP3 ENSDARG00000054456 734 1.621 - - - - - - 0.867 0.754 - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
84. slc8a2b ENSDARG00000100592 598 1.62 - - - - - 0.817 0.803 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
85. map7d2b ENSDARG00000045316 702 1.62 - - - - - 0.701 0.919 - - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
86. mapk11 ENSDARG00000045836 846 1.619 - - - - - 0.834 0.785 - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
87. NPTXR NPTXR 241 1.618 - - - - - 0.768 0.850 - -
88. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1.616 - - - - - 0.729 0.887 - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
89. SYT2 ENSDARG00000014169 265 1.616 - - - - - 0.753 0.863 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
90. CNTNAP3 ENSDARG00000067824 25 1.615 - - - - - 0.744 0.871 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
91. CABZ01028287.1 CABZ01028287.1 626 1.615 - - - - - 0.749 0.866 - -
92. atp1b2a ENSDARG00000099203 4010 1.615 - - - - - - 0.888 - 0.727 ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
93. sema3c ENSDARG00000034300 881 1.614 - - - - - 0.764 0.850 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
94. sept5a ENSDARG00000013843 1206 1.613 - - - - - 0.738 0.875 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
95. nova2 ENSDARG00000017673 7685 1.612 - - - - - 0.752 0.860 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
96. cadpsb ENSDARG00000070567 458 1.609 - - - - - 0.711 0.898 - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
97. fbxo41 ENSDARG00000078908 95 1.609 - - - - - 0.712 0.897 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
98. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.607 - - - - - 0.825 0.782 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
99. tmem35 ENSDARG00000052567 5685 1.607 - - - - - - 0.898 - 0.709 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
100. SPOCK1 ENSDARG00000074644 794 1.607 - - - - - 0.742 0.865 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]

There are 1613 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA