Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TMEM55B

Gene Name Gene ID Reads Annotation
TMEM55B TMEM55B 76










Genes with expression patterns similar to TMEM55B

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. TMEM55B TMEM55B 76 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CT583626.2 CT583626.2 53 1.882 - 0.882 - - - 1.000 - - -
3. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.836 - 0.882 - - - 0.954 - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
4. CABZ01020207.1 CABZ01020207.1 145 1.817 0.996 0.821 - - - - - - -
5. lrrc24 ENSDARG00000101704 224 1.816 0.977 - - - - - 0.839 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
6. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 1.8 0.972 - - - - - 0.828 - - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]
7. MYH9 MYH9 158 1.777 0.984 0.793 - - - - - - -
8. MLLT1 MLLT1 349 1.772 0.948 - - - - - 0.824 - -
9. zgc:85932 ENSDARG00000098239 373 1.768 0.993 - - - - - 0.775 - - zgc:85932 [Source:ZFIN;Acc:ZDB-GENE-040426-2460]
10. C22H19orf26 C22H19orf26 66 1.744 0.987 - - - - 0.757 - - -
11. TULP3 TULP3 433 1.744 0.977 0.767 - - - - - - -
12. KCNK17 ENSDARG00000105453 16 1.743 - 0.882 - - - 0.861 - - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
13. si:ch211-229b6.1 ENSDARG00000093422 151 1.742 0.996 - - - - 0.746 - - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
14. zfpm2b ENSDARG00000100560 125 1.726 - 0.882 - - - 0.844 - - - zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
15. rnf13 ENSDARG00000019438 1560 1.724 0.859 - - - - - 0.865 - - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
16. THEG ENSDARG00000078644 121 1.703 0.980 - - - - - 0.723 - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
17. PARP4 ENSDARG00000069934 70 1.701 - - - - - 0.808 0.893 - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
18. cep70 ENSDARG00000076965 140 1.689 - 0.828 - - - 0.861 - - - centrosomal protein 70 [Source:ZFIN;Acc:ZDB-GENE-070705-311]
19. si:ch211-173n18.4 129 1.671 - 0.858 - - - - 0.813 - - si:ch211-173n18.4, transcript variant X1
20. eno1b ENSDARG00000013750 63 1.666 - 0.796 - - - - 0.870 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
21. acot11b ENSDARG00000042122 235 1.663 0.932 0.731 - - - - - - - acyl-CoA thioesterase 11b [Source:ZFIN;Acc:ZDB-GENE-051127-37]
22. map4k2l_1 map4k2l_1 77 1.646 - 0.943 - - - 0.703 - - -
23. CNOT4_1 CNOT4_1 697 1.644 0.933 0.711 - - - - - - -
24. DDAH1 ENSDARG00000103042 101 1.643 - 0.901 - - - 0.742 - - - dimethylarginine dimethylaminohydrolase 1 [Source:NCBI gene;Acc:406561]
25. efr3bb 1533 1.637 0.912 - - - - - 0.725 - - EFR3 homolog Bb (S. cerevisiae), transcript variant X2
26. sirt3 ENSDARG00000035819 101 1.619 - 0.788 - - - - 0.831 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
27. sh3gl1a ENSDARG00000067958 1105 1.615 0.883 - - - - - 0.732 - - SH3-domain GRB2-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4524]
28. KIF20B KIF20B 800 1.609 - 0.825 - - - - 0.784 - -
29. CR762480.1 ENSDARG00000099580 17 1.593 - 0.875 - 0.718 - - - - -
30. zgc:136892 ENSDARG00000069505 365 1.573 0.825 - - - - - 0.748 - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
31. ZNF337_21 ZNF337_21 53 1.559 - - - - 0.715 0.844 - - -
32. FHOD3 FHOD3 422 1.524 - - - - - 0.708 0.816 - -
33. arhgap25 ENSDARG00000061784 112 1.505 - 0.777 - - - - 0.728 - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
34. ranbp1 ENSDARG00000014817 3371 1.502 0.790 - - - - - 0.712 - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
35. itpkb ENSDARG00000010059 2352 1.492 0.774 - - - - - 0.718 - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
36. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.49 - 0.766 - - - - 0.724 - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
37. exosc8 ENSDARG00000068755 951 1.476 - 0.744 - - - - 0.732 - - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
38. si:dkey-228a15.1 ENSDARG00000095698 267 1.434 - - - - - 0.712 0.722 - - si:dkey-228a15.1 [Source:ZFIN;Acc:ZDB-GENE-060503-344]
39. mst1ra ENSDARG00000060235 78 1.426 - 0.709 - - - 0.717 - - - macrophage stimulating 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-071218-2]
40. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
41. cabp7b ENSDARG00000060846 5 1 - - - - - 1.000 - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
42. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
43. rfx3 ENSDARG00000014550 2 1 - - - 1.000 - - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
44. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
45. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - 1.000 - - - - -
46. tmem176l.2 ENSDARG00000089399 22 1 - - - - - 1.000 - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
47. ctdnep1b ENSDARG00000035781 65 1 - - - - - 1.000 - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
48. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - 1.000 - - -
49. si:ch211-244b2.4 ENSDARG00000045530 32 1 - - - - - 1.000 - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
50. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1 - - - - - 1.000 - - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
51. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - - 1.000 - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
52. AL935186.3 ENSDARG00000109223 19 1 - - - - - 1.000 - - -
53. SLC4A8 ENSDARG00000015531 16 1 - - - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
54. tlr20al tlr20al 0 1 - - - - - 1.000 - - -
55. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
56. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
57. si:dkeyp-3f10.17 ENSDARG00000087254 1 1 - - - - - 1.000 - - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
58. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
59. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - 1.000 - - -
60. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
61. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
62. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
63. C2 C2 5 1 - - - 1.000 - - - - -
64. slc7a10b ENSDARG00000051730 44 1 - - - - - 1.000 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
65. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
66. UBXN11 ENSDARG00000053828 22 1 - - - - - 1.000 - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
67. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - 1.000 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
68. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - 1.000 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
69. SLC16A1 SLC16A1 37 1 - - - - - 1.000 - - -
70. EPHB1 ENSDARG00000076757 20 1 - - - - - 1.000 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
71. CABZ01054391.1 ENSDARG00000103952 2 1 - - - - - 1.000 - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
72. clrn1 ENSDARG00000102890 5 1 - - - 1.000 - - - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
73. gabrr1 ENSDARG00000043902 1 1 - - - 1.000 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
74. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - 1.000 - - -
75. rnasel2 ENSDARG00000043196 0 1 - - - - - 1.000 - - - ribonuclease like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-420]
76. DEF6 DEF6 19 1 - - - - - 1.000 - - -
77. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
78. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
79. si:ch211-220b11.4 si:ch211-220b11.4 8 1 - - - - - 1.000 - - -
80. ppm1na ENSDARG00000010231 3 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
81. ddx41_1 2 1 - - - 1.000 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
82. CR855327.1 CR855327.1 6 1 - - - - - 1.000 - - -
83. CABZ01055869.1 CABZ01055869.1 2 1 - - - - - 1.000 - - -
84. slc35f3a ENSDARG00000075909 1 1 - - - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
85. fasn ENSDARG00000087657 99 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
86. chst2b ENSDARG00000058585 33 1 - - - - - 1.000 - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
87. ifit2 ifit2 11 1 - - - - - 1.000 - - -
88. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
89. top3b ENSDARG00000027586 8 1 - - - - - 1.000 - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
90. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - 1.000 - - -
91. CU041398.1 CU041398.1 17 1 - - - - - 1.000 - - -
92. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - - - - 1.000 - - -
93. zgc:174704 10 1 - - - - - 1.000 - - - zgc:174704, transcript variant X2
94. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
95. TMBIM1 TMBIM1 2 1 - - - - - 1.000 - - -
96. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
97. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
98. CU468896.2 CU468896.2 38 1 1.000 - - - - - - - -
99. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - 1.000 - - - - -
100. si:ch211-274k16.9 ENSDARG00000095918 1 1 - - - - - 1.000 - - - si:ch211-274k16.9 [Source:ZFIN;Acc:ZDB-GENE-110408-30]

There are 1376 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA