Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMEM200B

Gene Name Gene ID Reads Annotation
TMEM200B ENSGALG00000024318 117 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]











Genes with expression patterns similar to TMEM200B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMEM200B ENSGALG00000024318 117 5 - 1.000 1.000 - - 1.000 - 1.000 - 1.000 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
2. ATF2 ENSGALG00000009287 73 1.686 - - - - - - - 0.740 - 0.946 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
3. PRPF19 ENSGALG00000040048 168 1.627 - - - - - 0.821 - 0.806 - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
4. PRPF39 184 1.568 - - - - - 0.781 - - - 0.787 pre-mRNA processing factor 39, transcript variant X7
5. TRABD2B ENSGALG00000027655 1090 1.532 - - - - - 0.741 - - - 0.791 TraB domain containing 2B [Source:HGNC Symbol;Acc:HGNC:44200]
6. SCUBE3 ENSGALG00000002675 12 1.497 - - 0.721 - - 0.776 - - - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
7. RGS14 ENSGALG00000003113 870 1.472 - - - - - 0.726 - - - 0.746 regulator of G protein signaling 14 [Source:HGNC Symbol;Acc:HGNC:9996]
8. ABCC3 ENSGALG00000007522 340 0.997 - - - - - - - 0.997 - - ATP binding cassette subfamily C member 3, transcript variant X5
9. TNN ENSGALG00000004538 21 0.991 - - - - - - - - - 0.991 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
10. CLIC3 ENSGALG00000038789 233 0.989 - - - - - - - - - 0.989 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
11. gga-mir-6544 ENSGALG00000027916 19 0.986 - - - - - - - - - 0.986 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
12. TNFAIP3 ENSGALG00000013861 11 0.986 - - - - - - - - - 0.986 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
13. NMBR ENSGALG00000013813 15 0.985 - - - - - - - - - 0.985 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
14. C3orf58 ENSGALG00000002347 27 0.985 - - - - - - - - - 0.985 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
15. BOK ENSGALG00000005772 117 0.984 - - - - - - - - - 0.984 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
16. KAT6B ENSGALG00000005035 301 0.983 - - - - - - - - - 0.983 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
17. TRAK2 ENSGALG00000008370 46 0.982 - - - - - - - - - 0.982 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
18. AKAP11 ENSGALG00000022739 82 0.981 - - - - - - - - - 0.981 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
19. ZMYND10 ENSGALG00000035883 58 0.98 - - - - - - - - - 0.980 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
20. TBX5 ENSGALG00000008253 820 0.976 - - - - - - - - - 0.976 T-box 5 [Source:NCBI gene;Acc:373988]
21. TRMT61A ENSGALG00000011522 14 0.976 - - - - - - - - - 0.976 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
22. PHF11 ENSGALG00000019094 770 0.974 - - - - - - - - - 0.974 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
23. SLC7A2 ENSGALG00000013627 58 0.973 - - - - - - - - - 0.973 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
24. ENSGALG00000025912 ENSGALG00000025912 4 0.972 - - 0.972 - - - - - - -
25. ZEB2 ENSGALG00000040465 315 0.97 - - - - - - - - - 0.970 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
26. TNFAIP2 ENSGALG00000011446 32 0.969 - - - - - - - - - 0.969 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
27. FAM154B FAM154B 175 0.968 - - - - - - - - - 0.968
28. INADL INADL 51 0.968 - - - - - - - - - 0.968
29. PKD2 ENSGALG00000010921 55 0.967 - - - - - - - - - 0.967 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
30. GSS ENSGALG00000003281 57 0.967 - - - - - - - - - 0.967 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
31. SENP7 ENSGALG00000044642 48 0.966 - - - - - - - - - 0.966 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
32. PXK ENSGALG00000007052 121 0.965 - - - - - - - - - 0.965 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
33. ING5 ENSGALG00000006317 149 0.965 - - - - - - - - - 0.965 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
34. KCNB1 ENSGALG00000004758 620 0.961 - - - - - - - - - 0.961 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
35. SLC20A1 ENSGALG00000013740 40 0.961 - - - - - - - - - 0.961 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
36. SMEK1 SMEK1 95 0.959 - - - - - - - - - 0.959
37. PDE3A ENSGALG00000013143 28 0.959 - - - - - - - - - 0.959 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
38. BMP2K ENSGALG00000010885 37 0.958 - - - - - - - - - 0.958 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
39. OSBPL2 ENSGALG00000005195 94 0.957 - - - - - - - - - 0.957 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
40. ROGDI ENSGALG00000001841 313 0.954 - - - - - - - - - 0.954 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
41. TRAF-5 TRAF-5 102 0.953 - - - - - - - - - 0.953
42. TM6SF1 ENSGALG00000006027 20 0.953 - - - - - - - - - 0.953 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
43. LMBR1 ENSGALG00000030379 29 0.952 - - - - - - - - - 0.952 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
44. ERRFI1 ENSGALG00000000535 83 0.947 - - - - - - - - - 0.947 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
45. ZNF385B ENSGALG00000009012 290 0.947 - - - - - - - - - 0.947 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
46. SMOC2 ENSGALG00000011205 340 0.943 - - - - - - - - - 0.943 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
47. NME6 ENSGALG00000038044 1231 0.942 - - - - - - - - - 0.942 NME/NM23 nucleoside diphosphate kinase 6
48. MYH11 ENSGALG00000006520 166 0.939 - - - - - - - - - 0.939 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
49. MYCN ENSGALG00000016462 1930 0.938 - - - - - - - - - 0.938 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
50. ANKRD33B ENSGALG00000038328 22 0.937 - - - - - 0.937 - - - - ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
51. KIF24 ENSGALG00000005806 124 0.936 - - - - - - - - - 0.936 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
52. TGFBRAP1 ENSGALG00000016795 81 0.935 - - - - - - - - - 0.935 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
53. MVP ENSGALG00000040471 1407 0.935 - - - - - - - - - 0.935 major vault protein [Source:NCBI gene;Acc:420049]
54. SERAC1 ENSGALG00000013732 24 0.935 - - - - - - - - - 0.935 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
55. ITM2B ENSGALG00000016996 1112 0.935 - - - - - - - - - 0.935 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
56. SRRD ENSGALG00000005614 234 0.934 - - - - - - - - - 0.934 SRR1 domain containing [Source:NCBI gene;Acc:416908]
57. SRR ENSGALG00000003155 93 0.934 - - - - - - - - - 0.934 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
58. CREB5 ENSGALG00000038265 92 0.933 - - - - - - - - - 0.933 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
59. HS1BP3 ENSGALG00000016486 380 0.932 - - - - - - - - - 0.932 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
60. KIAA0895 ENSGALG00000036301 280 0.931 - - - - - - - - - 0.931 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
61. SLC30A9 ENSGALG00000031415 36 0.928 - - - - - - - - - 0.928 solute carrier family 30 member 9
62. CP ENSGALG00000030773 119 0.921 - - - - - 0.921 - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
63. TMX1 ENSGALG00000020340 6 0.919 - - - - - 0.919 - - - - thioredoxin related transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:15487]
64. BLOC1S2 ENSGALG00000005794 544 0.917 - - - - - - - - - 0.917 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
65. KCNB2 ENSGALG00000031693 31 0.911 - - - - - - - - - 0.911 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
66. NAALAD2 202 0.909 - - - - - - - - - 0.909 N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
67. TMEM116 ENSGALG00000004760 217 0.908 - - - - - - - - - 0.908 transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
68. ALDH6A1 ENSGALG00000010211 29 0.907 - - - - - - - - - 0.907 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
69. COQ2 ENSGALG00000041294 25 0.906 - - - - - - - - - 0.906 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
70. NR5A2 ENSGALG00000002182 392 0.906 - - - - - - - - - 0.906 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
71. ENDOV 121 0.906 - - - - - - - - - 0.906 endonuclease V
72. FAM192A ENSGALG00000021473 10213 0.905 - - - - - - - - - 0.905 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
73. TUSC1 22 0.905 - - - - - - - - - 0.905 tumor suppressor candidate 1
74. CD83 ENSGALG00000046032 56 0.902 - - 0.902 - - - - - - - CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]
75. LEO1 ENSGALG00000004696 111 0.901 - - - - - - - - - 0.901 LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
76. GLOD5 ENSGALG00000025991 17 0.899 - - - - - 0.899 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
77. GPR88 ENSGALG00000005252 4 0.899 - - - - - 0.899 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
78. ENSGALG00000028413 ENSGALG00000028413 551 0.899 - - - - - 0.899 - - - -
79. ANGPTL3 ENSGALG00000010978 335 0.899 - - - - - 0.899 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
80. HINFP ENSGALG00000006806 15 0.899 - - - - - 0.899 - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
81. CYP2H1 CYP2H1 363 0.899 - - - - - 0.899 - - - -
82. SERPINA12 SERPINA12 3 0.899 - - - - - 0.899 - - - -
83. HMGCS2 ENSGALG00000002960 54 0.897 - - - - - 0.897 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
84. TMEM117 ENSGALG00000009596 48 0.896 - - - - - 0.896 - - - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
85. PALM2 ENSGALG00000015655 20 0.892 - - - - - 0.892 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
86. MRM1 ENSGALG00000039523 2009 0.892 - - - - - - - - - 0.892 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
87. DMXL1 ENSGALG00000002227 88 0.892 - - - - - - - - - 0.892 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
88. TRAIP ENSGALG00000002908 6901 0.89 - - - - - - - - - 0.890 TRAF interacting protein [Source:NCBI gene;Acc:415927]
89. NAPG ENSGALG00000013932 67 0.889 - - - - - - - - - 0.889 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
90. LOC422926 ENSGALG00000027090 16 0.888 - - 0.888 - - - - - - - uncharacterized LOC422926
91. TPGS1 ENSGALG00000026780 688 0.887 - - - - - - - - - 0.887 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
92. P2RY1 ENSGALG00000010357 11 0.886 - - - - - 0.886 - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
93. MPP3 ENSGALG00000042521 1372 0.886 - - - - - - - - - 0.886 membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
94. CRYBA2 ENSGALG00000011354 14 0.883 - - - - - 0.883 - - - - crystallin beta A2 [Source:NCBI gene;Acc:373999]
95. RAD1 ENSGALG00000003365 1417 0.883 - - - - - - - - - 0.883 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
96. ENSGALG00000019568 ENSGALG00000019568 25 0.882 - - - - - 0.882 - - - -
97. MATR3 ENSGALG00000002478 12793 0.881 - - - - - - - - - 0.881 matrin 3 [Source:NCBI gene;Acc:373948]
98. TMEM129 ENSGALG00000015710 1519 0.877 - - - - - - - - - 0.877 transmembrane protein 129 [Source:NCBI gene;Acc:422900]
99. C11orf74 C11orf74 260 0.877 - - - - - 0.877 - - - -
100. gga-mir-6703 ENSGALG00000029026 124 0.876 - - - - - 0.876 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]

There are 324 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA