Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMEM18

Gene Name Gene ID Reads Annotation
TMEM18 ENSGALG00000028744 11779 transmembrane protein 18 [Source:NCBI gene;Acc:421911]











Genes with expression patterns similar to TMEM18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMEM18 ENSGALG00000028744 11779 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein 18 [Source:NCBI gene;Acc:421911]
2. C15H12ORF49 C15H12ORF49 13250 1.973 - - - - 0.985 - 0.988 - - -
3. ZEB1 ENSGALG00000007260 9277 1.948 - - - - 0.954 - 0.994 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
4. KCTD9 ENSGALG00000000275 3455 1.824 - - - - 0.988 - - 0.836 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
5. FAM192A ENSGALG00000021473 10213 1.818 - - - - - - 0.993 0.825 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
6. WBP11 ENSGALG00000011745 11182 1.784 - - - - 0.861 - - 0.923 - - WW domain binding protein 11, transcript variant X1
7. TSSC4 ENSGALG00000006530 10413 1.556 - - - - 0.810 - - 0.746 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
8. CCNYL1 ENSGALG00000008485 11958 0.997 - - - - - - 0.997 - - - cyclin Y like 1
9. EIF3D ENSGALG00000012529 40887 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
10. MATR3 ENSGALG00000002478 12793 0.996 - - - - - - 0.996 - - - matrin 3 [Source:NCBI gene;Acc:373948]
11. RAB12 ENSGALG00000033608 14160 0.996 - - - - - - 0.996 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
12. CTBPL ENSGALG00000007642 14238 0.996 - - - - - - 0.996 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
13. HDAC8 ENSGALG00000004825 12066 0.995 - - - - - - 0.995 - - - histone deacetylase 8, transcript variant X2
14. EFTUD2 ENSGALG00000000988 17913 0.995 - - - - - - 0.995 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
15. ARHGAP32 ENSGALG00000043511 7916 0.994 - - - - - - 0.994 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
16. DAPK3 ENSGALG00000037733 6215 0.994 - - - - - - 0.994 - - - death-associated protein kinase 3, transcript variant X2
17. RNF141 ENSGALG00000029586 4962 0.994 - - - - - - 0.994 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
18. RNF113A ENSGALG00000000538 3985 0.993 - - - - 0.993 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
19. INTS4 ENSGALG00000000091 5965 0.993 - - - - - - 0.993 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
20. EIF1B ENSGALG00000038646 9508 0.993 - - - - - - 0.993 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
21. USP1 ENSGALG00000010957 8297 0.993 - - - - 0.993 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
22. WDHD1 ENSGALG00000012199 3570 0.993 - - - - - - 0.993 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
23. Sep-06 Sep-06 5961 0.993 - - - - - - 0.993 - - -
24. C9orf64 ENSGALG00000012589 6097 0.993 - - - - - - 0.993 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
25. MCM3 ENSGALG00000016676 16934 0.993 - - - - - - 0.993 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
26. RAE1 ENSGALG00000007653 8930 0.992 - - - - 0.992 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
27. USPL1 ENSGALG00000017079 6263 0.992 - - - - - - 0.992 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
28. NDST2 ENSGALG00000005107 4224 0.992 - - - - 0.992 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
29. CORO1C ENSGALG00000004901 7055 0.992 - - - - - - 0.992 - - - coronin 1C [Source:NCBI gene;Acc:416893]
30. MYEOV2 MYEOV2 5155 0.992 - - - - 0.992 - - - - -
31. CNOT6 ENSGALG00000034316 10496 0.992 - - - - - - 0.992 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
32. FAT1 ENSGALG00000013579 6030 0.992 - - - - - - 0.992 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
33. CXCL12 ENSGALG00000041346 4128 0.992 - - - - - - 0.992 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
34. VSX1 ENSGALG00000037576 1517 0.991 - - - - - - 0.991 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
35. TRIM33 ENSGALG00000001976 7404 0.991 - - - - 0.991 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
36. WHSC1L1 4065 0.991 - - - - 0.991 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
37. PPAPDC1B PPAPDC1B 6698 0.991 - - - - 0.991 - - - - -
38. gga-mir-6584 ENSGALG00000028834 1481 0.991 - - - - 0.991 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
39. CCDC59 ENSGALG00000028648 9272 0.991 - - - - 0.991 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
40. BCL9 ENSGALG00000037655 4620 0.991 - - - - 0.991 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
41. MRPL22 ENSGALG00000003919 2760 0.991 - - - - 0.991 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
42. GPC1 ENSGALG00000040316 13364 0.991 - - - - - - 0.991 - - - glypican 1 [Source:NCBI gene;Acc:424770]
43. NOL6 ENSGALG00000030730 7191 0.991 - - - - 0.991 - - - - - nucleolar protein 6
44. LRPAP1 ENSGALG00000015612 3526 0.991 - - - - - - 0.991 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
45. EPB41L1 ENSGALG00000034171 3616 0.99 - - - - 0.990 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
46. C4orf27 C4orf27 16724 0.99 - - - - 0.990 - - - - -
47. IBA57 ENSGALG00000005328 4362 0.99 - - - - 0.990 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
48. HYOU1 ENSGALG00000007659 3555 0.99 - - - - 0.990 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
49. HMGB3 ENSGALG00000009071 12011 0.99 - - - - 0.990 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
50. HTRA3 ENSGALG00000034673 512 0.99 - - - - 0.990 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
51. TBC1D7 ENSGALG00000012731 4891 0.99 - - - - 0.990 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
52. ABCC1 ENSGALG00000006646 2596 0.99 - - - - 0.990 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
53. MED1 ENSGALG00000001708 9556 0.99 - - - - 0.990 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
54. MAP1B ENSGALG00000014999 6288 0.99 - - - - 0.990 - - - - - microtubule associated protein 1B
55. SLC9A3R1 ENSGALG00000007650 13053 0.99 - - - - - - 0.990 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
56. LUC7L2 ENSGALG00000036238 11817 0.99 - - - - 0.990 - - - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
57. UBE2L3 ENSGALG00000036739 21401 0.99 - - - - - - 0.990 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
58. MRPL46 ENSGALG00000006782 5033 0.99 - - - - 0.990 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
59. PGAM5 ENSGALG00000002137 7700 0.989 - - - - 0.989 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
60. THBS1 ENSGALG00000009626 3521 0.989 - - - - 0.989 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
61. TMEM39B ENSGALG00000003287 4125 0.989 - - - - 0.989 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
62. TM2D2 ENSGALG00000003356 7088 0.989 - - - - 0.989 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
63. AGPAT3 ENSGALG00000031932 6903 0.989 - - - - 0.989 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
64. SEC61A2 ENSGALG00000036300 4235 0.989 - - - - 0.989 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
65. IFT20 ENSGALG00000005707 23973 0.989 - - - - - - 0.989 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
66. MRPS11 ENSGALG00000006777 16009 0.989 - - - - 0.989 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
67. DNAJC2 ENSGALG00000008249 28064 0.989 - - - - 0.989 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
68. MCM6 ENSGALG00000012348 12523 0.988 - - - - - - 0.988 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
69. OPTC ENSGALG00000003554 3698 0.988 - - - - 0.988 - - - - - opticin [Source:NCBI gene;Acc:395130]
70. PHKA1 ENSGALG00000004801 2510 0.988 - - - - 0.988 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
71. DNAJC7 ENSGALG00000042796 14597 0.988 - - - - - - 0.988 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
72. ETF1 ENSGALG00000002262 14560 0.987 - - - - 0.987 - - - - - eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:HGNC:3477]
73. NSG1 ENSGALG00000015010 5829 0.987 - - - - 0.987 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
74. CENPE ENSGALG00000013208 12337 0.987 - - - - 0.987 - - - - - centromere protein E, transcript variant X4
75. LRPPRC ENSGALG00000009967 17091 0.987 - - - - - - 0.987 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
76. TBRG4 ENSGALG00000038102 9269 0.987 - - - - 0.987 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
77. SAMM50 ENSGALG00000014194 20437 0.986 - - - - 0.986 - - - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
78. RAP1B ENSGALG00000009927 26562 0.986 - - - - - - 0.986 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
79. RAB21 ENSGALG00000010183 7718 0.986 - - - - 0.986 - - - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
80. RILPL2 ENSGALG00000003321 5632 0.984 - - - - 0.984 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
81. M6PR ENSGALG00000031681 9442 0.984 - - - - 0.984 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
82. HOXB3 ENSGALG00000043219 5198 0.984 - - - - 0.984 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
83. VPS8 ENSGALG00000006704 5419 0.984 - - - - 0.984 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
84. DHFR ENSGALG00000026757 18478 0.984 - - - - - - 0.984 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
85. UQCRC2 ENSGALG00000002490 23477 0.983 - - - - 0.983 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
86. MCM4 ENSGALG00000012915 13151 0.983 - - - - 0.983 - - - - - minichromosome maintenance complex component 4
87. TNPO3 ENSGALG00000039420 5178 0.983 - - - - 0.983 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
88. OAF ENSGALG00000006715 12518 0.982 - - - - 0.982 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
89. TCF7L2 ENSGALG00000008883 13688 0.982 - - - - 0.982 - - - - - transcription factor 7-like 2 (T-cell specific, HMG-box) [Source:NCBI gene;Acc:395508]
90. NUP37 ENSGALG00000012759 9985 0.981 - - - - 0.981 - - - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
91. SPG21 ENSGALG00000007262 8050 0.981 - - - - 0.981 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
92. SMARCE1 ENSGALG00000003882 49063 0.981 - - - - - - 0.981 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
93. MORN4 ENSGALG00000006149 7772 0.981 - - - - 0.981 - - - - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
94. CREPT CREPT 17142 0.981 - - - - 0.981 - - - - -
95. PUF60 ENSGALG00000039901 26902 0.98 - - - - 0.980 - - - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
96. ESRP2 ENSGALG00000003374 4436 0.98 - - - - 0.980 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
97. HNRNPH3 ENSGALG00000003947 28724 0.98 - - - - - - 0.980 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
98. ZNF644 ENSGALG00000034253 28348 0.98 - - - - - - 0.980 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
99. RALB ENSGALG00000026493 14590 0.979 - - - - 0.979 - - - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
100. PPIG ENSGALG00000009839 24114 0.979 - - - - - - 0.979 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]

There are 158 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA