Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMEFF1

Gene Name Gene ID Reads Annotation
TMEFF1 ENSGALG00000013212 4222 transmembrane protein with EGF-like and two follistatin-like domains 1











Genes with expression patterns similar to TMEFF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMEFF1 ENSGALG00000013212 4222 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein with EGF-like and two follistatin-like domains 1
2. ST5 6869 1.751 - - - 0.766 - - - 0.985 - - suppression of tumorigenicity 5, transcript variant X1
3. RGMA ENSGALG00000039173 12874 1.748 - - - - - - - 0.998 - 0.750 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
4. COG7 ENSGALG00000006156 4072 1.735 - - - 0.789 - - - 0.946 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
5. RFWD3 2315 1.722 - - - - - - 0.724 0.998 - - ring finger and WD repeat domain 3
6. DBNDD2 ENSGALG00000003921 8301 1.707 - - - 0.853 - - - 0.854 - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
7. RPF1 ENSGALG00000008796 9809 1.656 - - - 0.729 - - - 0.927 - - ribosome production factor 1 homolog
8. FABP5 ENSGALG00000041344 3984 1.57 - - - 0.787 - - - - - 0.783 fatty acid binding protein 5 [Source:NCBI gene;Acc:420197]
9. PSMD14 ENSGALG00000011128 13335 1.504 - - - 0.787 - - - 0.717 - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
10. NEFL ENSGALG00000000314 4883 1.503 - - - - - 0.736 - - - 0.767 neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
11. MURC 3759 1.502 - - 0.706 - - - - - - 0.796 muscle related coiled-coil protein
12. UBE2R2 ENSGALG00000001668 9234 1.455 - - - - - - 0.724 0.731 - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
13. C10orf76 C10orf76 2424 0.999 - - - - - - - 0.999 - -
14. DERL3 ENSGALG00000005994 1499 0.999 - - - - - - - 0.999 - - derlin 3 [Source:NCBI gene;Acc:416934]
15. OLFM1 ENSGALG00000002515 1841 0.999 - - - - - - - 0.999 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
16. FAM114A1 ENSGALG00000013583 736 0.999 - - - - - - - 0.999 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
17. USP3 ENSGALG00000003427 1236 0.999 - - - - - - - 0.999 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
18. SLC43A3 ENSGALG00000020479 1332 0.999 - - - - - - - 0.999 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
19. WDR47 ENSGALG00000002129 2624 0.999 - - - - - - - 0.999 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
20. NUDCD1 ENSGALG00000040879 2965 0.999 - - - - - - - 0.999 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
21. DACH1 ENSGALG00000037015 5648 0.999 - - - - - - - 0.999 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
22. TOLLIP ENSGALG00000006697 917 0.999 - - - - - - - 0.999 - - toll interacting protein [Source:NCBI gene;Acc:423099]
23. ACTR10 ENSGALG00000012041 2752 0.999 - - - - - - - 0.999 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
24. ACL ACL 1813 0.999 - - - - - - - 0.999 - -
25. PHF12 ENSGALG00000031368 1960 0.998 - - - - - - - 0.998 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
26. ENSGALG00000004643 ENSGALG00000004643 2297 0.998 - - - - - - - 0.998 - -
27. DIP2C ENSGALG00000006652 1858 0.998 - - - - - - - 0.998 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
28. DARS ENSGALG00000012355 2887 0.998 - - - - - - - 0.998 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
29. SOCS5 ENSGALG00000010016 1134 0.998 - - - - - - - 0.998 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
30. CDC123 ENSGALG00000014038 1418 0.998 - - - - - - - 0.998 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
31. CUTC ENSGALG00000037283 2530 0.998 - - - - - - - 0.998 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
32. RRAGD ENSGALG00000026971 2429 0.998 - - - - - - - 0.998 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
33. C3H6ORF120 C3H6ORF120 2712 0.998 - - - - - - - 0.998 - -
34. LYPLA2 ENSGALG00000004002 3939 0.998 - - - - - - - 0.998 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
35. TTC39A ENSGALG00000010540 1025 0.998 - - - - - - - 0.998 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
36. HIC2 ENSGALG00000033416 4051 0.997 - - - - - - - 0.997 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
37. SNAI1 ENSGALG00000008018 3930 0.997 - - - - - - - 0.997 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
38. PI4KA ENSGALG00000040756 3973 0.997 - - - - - - - 0.997 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
39. UBQLN1 ENSGALG00000012585 5158 0.997 - - - - - - - 0.997 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
40. PYURF ENSGALG00000039869 5657 0.996 - - - - - - - 0.996 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
41. MFN1 ENSGALG00000041873 4170 0.996 - - - - - - - 0.996 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
42. TRNT1 ENSGALG00000017368 11932 0.995 - - - - - - - 0.995 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
43. DTD2 ENSGALG00000009978 4322 0.995 - - - - - - - 0.995 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
44. NDUFAF2 ENSGALG00000027564 7302 0.995 - - - - - - - 0.995 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
45. RP2 ENSGALG00000016728 3291 0.995 - - - - - - - 0.995 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
46. HCFC2 ENSGALG00000029616 4525 0.994 - - - - - - - 0.994 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
47. LONP1 ENSGALG00000040492 7133 0.994 - - - - - - - 0.994 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
48. SDAD1 ENSGALG00000011543 5191 0.994 - - - - - - - 0.994 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
49. NABP1 ENSGALG00000025884 4195 0.992 - - - - - - - 0.992 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
50. SYNE2 ENSGALG00000011811 5542 0.992 - - - - - - - 0.992 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
51. TP53INP1 ENSGALG00000041353 6890 0.992 - - - - - - - 0.992 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
52. ZNF639 ENSGALG00000005944 6387 0.991 - - - - - - - 0.991 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
53. PITX3 ENSGALG00000005613 1518 0.99 - - - - - - - 0.990 - - paired like homeodomain 3
54. ZC3H6 ENSGALG00000008269 10353 0.989 - - - - - - - 0.989 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
55. DYRK2 ENSGALG00000009901 3141 0.989 - - - - - - - 0.989 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
56. MICU3 ENSGALG00000013661 1466 0.984 - - - - - - - 0.984 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
57. DCAF7 ENSGALG00000000510 8681 0.984 - - - - - - - 0.984 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
58. PDZD11 ENSGALG00000004198 11484 0.984 - - - - - - - 0.984 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
59. HAPLN1 ENSGALG00000015627 14942 0.981 - - - - - - - 0.981 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
60. PPP3CB ENSGALG00000005243 8794 0.981 - - - - - - - 0.981 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
61. USP9X ENSGALG00000016236 9419 0.98 - - - - - - - 0.980 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
62. ABL ABL 9532 0.98 - - - - - - - 0.980 - -
63. COMMD7 ENSGALG00000006630 11491 0.979 - - - - - - - 0.979 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
64. GALNT1 ENSGALG00000013135 13583 0.973 - - - - - - - 0.973 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
65. TFIP11 ENSGALG00000005623 7784 0.973 - - - - - - - 0.973 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
66. DHFR ENSGALG00000026757 18478 0.971 - - - - - - - 0.971 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
67. SAMHD1 ENSGALG00000001231 5218 0.97 - - - - - - - 0.970 - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
68. RGL1 ENSGALG00000004728 3004 0.966 - - - - - - - 0.966 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
69. TMEM120B ENSGALG00000004254 2819 0.964 - - - - - - - 0.964 - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
70. APAF1 ENSGALG00000011531 3102 0.959 - - - - - - - 0.959 - - apoptotic peptidase activating factor 1 [Source:HGNC Symbol;Acc:HGNC:576]
71. PPP2R5C ENSGALG00000029996 5759 0.957 - - - - - - - 0.957 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
72. GPATCH1 ENSGALG00000004839 6455 0.955 - - - - - - - 0.955 - - G-patch domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24658]
73. GPS1 ENSGALG00000002827 8433 0.951 - - - - - - - 0.951 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
74. CIAPIN1 ENSGALG00000029268 23036 0.933 - - - - - - - 0.933 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
75. PKP2 ENSGALG00000012913 2547 0.929 - - - - - - - 0.929 - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
76. MT-ND4L MT-ND4L 12537 0.913 - - - - - - - 0.913 - -
77. MED9 ENSGALG00000031214 10779 0.904 - - - - - - - 0.904 - - mediator complex subunit 9 [Source:NCBI gene;Acc:416506]
78. PTCD3 ENSGALG00000015773 3059 0.9 - - - - - - - 0.900 - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
79. PTPLB PTPLB 13107 0.9 - - - - - - - 0.900 - -
80. ZCCHC8 ENSGALG00000004486 3201 0.898 - - - - - - - 0.898 - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
81. NUPL1 NUPL1 8197 0.894 - - - - - - - 0.894 - -
82. EGLN1 ENSGALG00000041422 11032 0.882 - - - - - - - 0.882 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
83. ALG2 ENSGALG00000013573 5229 0.88 - - - - - - - 0.880 - - ALG2, alpha-1,3/1,6-mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23159]
84. ZBTB16 ENSGALG00000038540 5544 0.875 - - - 0.875 - - - - - - Gallus gallus zinc finger and BTB domain containing 32 (ZBTB32), mRNA. [Source:RefSeq mRNA;Acc:NM_001321488]
85. RBM25 ENSGALG00000009332 10842 0.874 - - - - - - - 0.874 - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
86. PPP1CB ENSGALG00000010026 6909 0.872 - - - 0.872 - - - - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
87. RNPC3 ENSGALG00000005162 269 0.872 - - - 0.872 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
88. MRPL35 ENSGALG00000022950 26070 0.872 - - - - - - - 0.872 - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
89. STAM ENSGALG00000035287 7649 0.871 - - - - - - - 0.871 - - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
90. PHF6 ENSGALG00000006094 1748 0.871 - - - 0.871 - - - - - - PHD finger protein 6 [Source:HGNC Symbol;Acc:HGNC:18145]
91. LARP1 ENSGALG00000040109 14808 0.87 - - - - - - - 0.870 - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
92. LRRCC1 ENSGALG00000039499 480 0.868 - - - 0.868 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
93. FAM133B 9239 0.868 - - - 0.868 - - - - - - family with sequence similarity 133 member B
94. KCNK5 ENSGALG00000034077 3233 0.867 - - - 0.867 - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
95. HINT3 ENSGALG00000044342 5674 0.866 - - - 0.866 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
96. GGA.31975 GGA.31975 8825 0.864 - - - - - - - 0.864 - -
97. NR6A1 ENSGALG00000001073 2071 0.863 - - - 0.863 - - - - - - nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]
98. ITGA9 ENSGALG00000029378 415 0.862 - - - 0.862 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
99. GFPT2 ENSGALG00000039705 562 0.862 - - - 0.862 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
100. TGS1 ENSGALG00000015340 5897 0.86 - - - 0.860 - - - - - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]

There are 336 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA