Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMED5

Gene Name Gene ID Reads Annotation
TMED5 27507 transmembrane p24 trafficking protein 5











Genes with expression patterns similar to TMED5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMED5 27507 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane p24 trafficking protein 5
2. ATPAF1 ENSGALG00000010444 3677 1.592 - - 0.770 - - - - 0.822 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
3. NOVA1 ENSGALG00000009850 7584 1.577 - - 0.725 - - - - 0.852 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
4. LGMN ENSGALG00000010811 7401 1.575 - - - - - - 0.703 0.872 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
5. PCBP4 ENSGALG00000027695 7937 1.57 - - 0.778 - - - 0.792 - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
6. BDH1_1 ENSGALG00000023601 6109 1.528 - - - - - - 0.743 0.785 - - 3-hydroxybutyrate dehydrogenase, type 1
7. CRHOB CRHOB 27139 1.514 - - - - - - 0.785 0.729 - -
8. RSL1D1 ENSGALG00000033690 13638 1.499 - - 0.728 - - - - 0.771 - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
9. ARF4 ENSGALG00000005622 50567 1.496 - - 0.759 - 0.737 - - - - - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
10. CPT1A ENSGALG00000007077 3199 1.48 - - 0.743 - - - - - 0.737 - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
11. RCHY1 ENSGALG00000023335 12947 1.468 - - 0.734 - - - - 0.734 - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
12. ACTL6A ENSGALG00000009061 13013 1.448 - - 0.724 - - - 0.724 - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
13. API5 ENSGALG00000037968 18265 1.445 - - 0.733 - 0.712 - - - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
14. RSU1 ENSGALG00000040891 12561 0.917 - - - - - - 0.917 - - - Ras suppressor protein 1 [Source:NCBI gene;Acc:420524]
15. ACO2 ENSGALG00000011950 30387 0.917 - - - - - - - 0.917 - - aconitase 2 [Source:NCBI gene;Acc:374009]
16. TOP1 ENSGALG00000003681 30214 0.912 - - - - - - 0.912 - - - DNA topoisomerase I [Source:NCBI gene;Acc:396004]
17. ARHGDIB ENSGALG00000011738 39492 0.904 - - - - - - 0.904 - - - Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]
18. CNOT6 ENSGALG00000034316 10496 0.904 - - - - - - - 0.904 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
19. RPB6 RPB6 9517 0.902 - - - - - - - 0.902 - -
20. PDCD5 ENSGALG00000004648 22576 0.896 - - - - - - 0.896 - - - programmed cell death 5 [Source:NCBI gene;Acc:415765]
21. SH3GLB1 ENSGALG00000006284 12764 0.896 - - 0.896 - - - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
22. TBCA ENSGALG00000004353 18510 0.892 - - - - - - 0.892 - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
23. MRPS33 ENSGALG00000028879 17966 0.89 - - - - - - 0.890 - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
24. ITM2A ENSGALG00000004107 29262 0.889 - - - - - - 0.889 - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
25. PPP4R2 ENSGALG00000007810 15127 0.888 - - - - - - 0.888 - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
26. CNDP2 ENSGALG00000019514 19531 0.886 - - - - - - - 0.886 - - carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
27. COPB1 ENSGALG00000006015 16518 0.884 - - - - - - 0.884 - - - coatomer protein complex subunit beta 1 [Source:NCBI gene;Acc:423063]
28. ISCA1 ENSGALG00000012606 10342 0.883 - - - - - - - 0.883 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
29. EMC3 ENSGALG00000003738 10363 0.881 - - - - - - 0.881 - - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
30. FAM136A ENSGALG00000042163 39487 0.88 - - - - - - - 0.880 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
31. CAT ENSGALG00000030187 7534 0.875 - - - - - - - 0.875 - - catalase [Source:NCBI gene;Acc:423600]
32. RPL22L1 ENSGALG00000009312 59030 0.874 - - - - - - 0.874 - - - ribosomal protein L22 like 1 [Source:NCBI gene;Acc:100858296]
33. THOC7 ENSGALG00000007299 38227 0.874 - - - - - - 0.874 - - - THO complex 7 [Source:NCBI gene;Acc:416077]
34. ARL5B ENSGALG00000008557 12887 0.873 - - - - - - 0.873 - - - ADP ribosylation factor like GTPase 5B [Source:NCBI gene;Acc:420513]
35. NAT10 ENSGALG00000014573 12754 0.873 - - - - - - - 0.873 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
36. FAM168B ENSGALG00000002172 12162 0.872 - - - - - - 0.872 - - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
37. PPP1CC ENSGALG00000004571 14748 0.87 - - - - - - - 0.870 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
38. SHROOM2 ENSGALG00000030802 4517 0.87 - - - - - - - 0.870 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
39. MFF ENSGALG00000003079 5289 0.869 - - - - - - - 0.869 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
40. ATP5H 53898 0.868 - - - - - - 0.868 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit D, transcript variant X2
41. BCAS2 ENSGALG00000002002 22536 0.868 - - - - - - 0.868 - - - breast carcinoma amplified sequence 2 [Source:NCBI gene;Acc:419884]
42. ENSGALG00000002595 ENSGALG00000002595 32163 0.867 - - - - - - - 0.867 - -
43. PAIP2 11856 0.864 - - - - - - 0.864 - - - poly(A) binding protein interacting protein 2, transcript variant X1
44. OLA1 ENSGALG00000009325 26414 0.861 - - - - - - 0.861 - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
45. NLK ENSGALG00000005699 9066 0.86 - - - - - - 0.860 - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
46. CYB5B ENSGALG00000000660 9733 0.858 - - - - - - - 0.858 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
47. SKA2 ENSGALG00000005090 24296 0.858 - - - - - - 0.858 - - - spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]
48. SEC31A ENSGALG00000040484 20190 0.856 - - - - - - 0.856 - - - SEC31 homolog A, COPII coat complex component [Source:NCBI gene;Acc:422597]
49. SGCE ENSGALG00000009670 3070 0.856 - - - - - - - 0.856 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
50. OTUD4 ENSGALG00000009968 3919 0.855 - - - - - - - 0.855 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
51. CAPZA1 ENSGALG00000001547 24242 0.855 - - - - - - - 0.855 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
52. USP40 ENSGALG00000004228 1137 0.853 - - 0.853 - - - - - - - ubiquitin specific peptidase 40 [Source:NCBI gene;Acc:100859211]
53. BRMS1L ENSGALG00000010093 4964 0.853 - - - - - - - 0.853 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
54. NMD3 ENSGALG00000009533 8726 0.853 - - - - - - - 0.853 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
55. ABCF2 ENSGALG00000034573 15639 0.852 - - - - - - 0.852 - - - ATP binding cassette subfamily F member 2 [Source:NCBI gene;Acc:426038]
56. FOPNL ENSGALG00000006532 2922 0.852 - - 0.852 - - - - - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
57. CEP192 ENSGALG00000035625 2270 0.849 - - - - - - - 0.849 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
58. ARID4A ENSGALG00000012037 8554 0.848 - - - - - - - 0.848 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
59. RAB24 ENSGALG00000002984 6264 0.847 - - - - - - - 0.847 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
60. EPRS ENSGALG00000009598 26412 0.847 - - - - - - 0.847 - - - glutamyl-prolyl-tRNA synthetase [Source:NCBI gene;Acc:421348]
61. ENSGALG00000000508 ENSGALG00000000508 19203 0.847 - - - - - - 0.847 - - -
62. COPS3 ENSGALG00000004834 16012 0.844 - - - - - - - 0.844 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
63. BMP5 ENSGALG00000016293 2119 0.844 - - - - - - - 0.844 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
64. TRIM37 ENSGALG00000005084 4036 0.844 - - 0.844 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
65. MRPS7 ENSGALG00000007999 5445 0.843 - - - - - - - 0.843 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
66. TMEM38B ENSGALG00000027472 2465 0.842 - - 0.842 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
67. LYRM4 ENSGALG00000027339 2917 0.842 - - - - - - - 0.842 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
68. KPNA1 ENSGALG00000014426 2724 0.842 - - - - - - - 0.842 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
69. MPG ENSGALG00000028691 1874 0.841 - - 0.841 - - - - - - - N-methylpurine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:7211]
70. GNG10 ENSGALG00000015683 6905 0.841 - - - - - - - 0.841 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
71. COX5A ENSGALG00000014121 55281 0.841 - - - - - - 0.841 - - - cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
72. UPF3B ENSGALG00000008618 12350 0.84 - - - - - - - 0.840 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
73. MRPS31 ENSGALG00000017033 9287 0.84 - - - - - - - 0.840 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
74. HAT1 ENSGALG00000009525 24864 0.84 - - - - - - 0.840 - - - histone acetyltransferase 1 [Source:NCBI gene;Acc:374037]
75. HHIP ENSGALG00000009948 1536 0.84 - - - - - - - 0.840 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
76. PDIA5 ENSGALG00000011689 6913 0.838 - - - - - - - 0.838 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
77. CCDC167 ENSGALG00000010151 3567 0.837 - - - - - - - 0.837 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
78. C19H17ORF85 C19H17ORF85 2538 0.837 - - 0.837 - - - - - - -
79. DDX18 ENSGALG00000012147 12463 0.836 - - 0.836 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
80. ARFGAP3 ENSGALG00000014140 4612 0.833 - - - - - - - 0.833 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
81. SLC25A14 ENSGALG00000004063 5574 0.833 - - - - - - - 0.833 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
82. DAPK3 ENSGALG00000037733 6215 0.833 - - 0.833 - - - - - - - death-associated protein kinase 3, transcript variant X2
83. WDR91 ENSGALG00000011724 5787 0.832 - - - - - - - 0.832 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
84. KLHL15 ENSGALG00000016345 1638 0.832 - - 0.832 - - - - - - - kelch like family member 15 [Source:NCBI gene;Acc:418598]
85. NIPSNAP3L ENSGALG00000027334 7514 0.832 - - 0.832 - - - - - - - nipsnap homolog 3-like
86. PM20D1 ENSGALG00000000724 2108 0.832 - - - - - - - 0.832 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
87. KCNK5 ENSGALG00000034077 3233 0.831 - - - - - - - 0.831 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
88. INTS9 ENSGALG00000016631 742 0.83 - - 0.830 - - - - - - - integrator complex subunit 9 [Source:NCBI gene;Acc:422023]
89. YPEL5 ENSGALG00000009047 3308 0.83 - - 0.830 - - - - - - - yippee like 5 [Source:NCBI gene;Acc:421299]
90. AES ENSGALG00000029503 17676 0.829 - - - - - - - 0.829 - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
91. GNMT ENSGALG00000043290 3288 0.827 - - 0.827 - - - - - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
92. AMMECR1L ENSGALG00000026728 2134 0.827 - - 0.827 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
93. MBIP ENSGALG00000010096 2476 0.827 - - 0.827 - - - - - - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
94. TCTEX1D2 ENSGALG00000027722 2201 0.826 - - - - - - - 0.826 - - Tctex1 domain containing 2
95. POLR3H ENSGALG00000011947 2899 0.826 - - - - - - - 0.826 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
96. GOT2 ENSGALG00000002321 4961 0.826 - - - - - - - 0.826 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
97. LGALS3 ENSGALG00000012173 3306 0.826 - - 0.826 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
98. PTP4A1 ENSGALG00000016271 23953 0.825 - - - - - - - 0.825 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
99. EPM2A ENSGALG00000012275 872 0.825 - - - - - - - 0.825 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
100. TNFRSF11B ENSGALG00000043167 911 0.825 - - - - - - - 0.825 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]

There are 362 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA