Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMED3

Gene Name Gene ID Reads Annotation
TMED3 ENSGALG00000008272 2838 transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]











Genes with expression patterns similar to TMED3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMED3 ENSGALG00000008272 2838 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
2. LPAR4 ENSGALG00000004121 2543 0.839 - - - - - - - 0.839 - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
3. TOR4A ENSGALG00000008623 1364 0.838 - - - - - - - 0.838 - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
4. SEMA4B ENSGALG00000008297 11202 0.825 - - - - - - - 0.825 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
5. MYH9 ENSGALG00000043092 3026 0.82 - - - - - - - 0.820 - - myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:396469]
6. PBRM1 ENSGALG00000037455 6450 0.817 - - - - - - - 0.817 - - polybromo 1 [Source:NCBI gene;Acc:396074]
7. RAB33B ENSGALG00000009790 2340 0.809 - - - - - - 0.809 - - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
8. SLIT3 ENSGALG00000001916 738 0.809 - - - - - - - 0.809 - - slit guidance ligand 3 [Source:NCBI gene;Acc:374173]
9. ZRANB1 ENSGALG00000031474 3909 0.805 - - - - - - - 0.805 - - zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
10. MMP2 ENSGALG00000003580 13120 0.801 - - - - - - - 0.801 - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
11. FLRT2 ENSGALG00000010589 490 0.801 - - - - - - - - - 0.801 fibronectin leucine rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3761]
12. ENSGALG00000010911 ENSGALG00000010911 469 0.793 - - - - - - - 0.793 - -
13. CALD1 ENSGALG00000033471 8950 0.793 - - - - - - - 0.793 - - caldesmon 1 [Source:NCBI gene;Acc:373965]
14. TPM1 ENSGALG00000003521 11894 0.789 - - - - - - - 0.789 - - tropomyosin 1 (alpha) [Source:NCBI gene;Acc:396366]
15. GJC1 ENSGALG00000000997 2279 0.782 - - - - - - - 0.782 - - gap junction protein gamma 1 [Source:NCBI gene;Acc:396501]
16. TMEM222 ENSGALG00000000955 2260 0.782 - - - - - - - 0.782 - - transmembrane protein 222 [Source:HGNC Symbol;Acc:HGNC:25363]
17. TOX2 ENSGALG00000003106 2472 0.777 - - - - - - - 0.777 - - TOX high mobility group box family member 2, transcript variant X1
18. METTL8 ENSGALG00000009564 912 0.776 - - - - - - 0.776 - - - methyltransferase like 8 [Source:HGNC Symbol;Acc:HGNC:25856]
19. SLC16A10 ENSGALG00000015040 1236 0.773 - - - - - - - 0.773 - - Gallus gallus solute carrier family 16 member 10 (SLC16A10), mRNA. [Source:RefSeq mRNA;Acc:NM_001321736]
20. gga-mir-6587 ENSGALG00000026386 9441 0.772 - - - - - - 0.772 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
21. HS3ST1 ENSGALG00000014934 182 0.772 - - - - - - - 0.772 - - heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5194]
22. TTYH3 ENSGALG00000004310 7422 0.768 - - - - - - - 0.768 - - tweety family member 3 [Source:HGNC Symbol;Acc:HGNC:22222]
23. MCEE ENSGALG00000003913 1527 0.766 - - - - - - - 0.766 - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
24. ATPBD4 ATPBD4 1823 0.765 - - - - - - - 0.765 - -
25. Sep-09 Sep-09 4723 0.764 - - - - - - - 0.764 - -
26. TST ENSGALG00000012488 5314 0.764 - - - - - - 0.764 - - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
27. SGK3 ENSGALG00000043570 2045 0.761 - - - - - - - 0.761 - - serum/glucocorticoid regulated kinase family member 3 [Source:NCBI gene;Acc:420167]
28. EXOG ENSGALG00000006153 4551 0.76 - - - - - - 0.760 - - - exo/endonuclease G [Source:HGNC Symbol;Acc:HGNC:3347]
29. MAP1LC3A ENSGALG00000038721 2230 0.76 - - - - - - - 0.760 - - microtubule associated protein 1 light chain 3 alpha
30. C1orf198 ENSGALG00000026600 5651 0.755 - - - - - - - 0.755 - - chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
31. TPGS1 ENSGALG00000026780 688 0.752 - - - - - - - - - 0.752 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
32. TMLHE ENSGALG00000007443 3619 0.752 - - - - - - 0.752 - - - trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
33. SERINC2 ENSGALG00000021685 1581 0.748 - - - - - - - 0.748 - - serine incorporator 2 [Source:NCBI gene;Acc:419558]
34. CACNA2D2 ENSGALG00000038242 2078 0.747 - - - - - - - 0.747 - - calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
35. GLIPR2 ENSGALG00000028821 5791 0.745 - - - - - - - 0.745 - - GLI pathogenesis related 2, transcript variant X2
36. KIAA1671 ENSGALG00000005512 2540 0.745 - - - - - - 0.745 - - - KIAA1671 [Source:NCBI gene;Acc:768701]
37. C2orf40 ENSGALG00000043690 7790 0.744 - - - - - - - 0.744 - - chromosome 2 open reading frame 40 [Source:HGNC Symbol;Acc:HGNC:24642]
38. MED19 ENSGALG00000007341 4913 0.743 - - - - - - 0.743 - - - mediator complex subunit 19 [Source:HGNC Symbol;Acc:HGNC:29600]
39. PRCP ENSGALG00000037521 4012 0.743 - - - - - - - 0.743 - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
40. FBRSL1 ENSGALG00000002205 561 0.74 - - - - - - - 0.740 - - fibrosin like 1 [Source:HGNC Symbol;Acc:HGNC:29308]
41. HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 0.739 - - - - - - - 0.739 - - homer scaffolding protein 3, transcript variant X4
42. EGFLAM ENSGALG00000003726 4588 0.739 - - - - - - - 0.739 - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
43. RRAGC ENSGALG00000033079 4966 0.738 - - - - - - - 0.738 - - Ras related GTP binding C [Source:NCBI gene;Acc:419605]
44. TEK ENSGALG00000001840 1365 0.737 - - - - - - - 0.737 - - TEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]
45. TMED10 ENSGALG00000010318 9317 0.736 - - - - - - - 0.736 - - transmembrane p24 trafficking protein 10 [Source:NCBI gene;Acc:423362]
46. EIF4H ENSGALG00000001313 59 0.736 - - - - - - - - - 0.736 eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
47. ENSGALG00000009863 ENSGALG00000009863 7375 0.735 - - - - - - 0.735 - - -
48. KRT15 ENSGALG00000019718 64 0.733 - - - - - - - 0.733 - - keratin 15 [Source:NCBI gene;Acc:408040]
49. IAP3 IAP3 794 0.732 - - - - - - - 0.732 - -
50. TGFBR3 ENSGALG00000006038 2951 0.732 - - - - - - - 0.732 - - transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
51. ASUN ASUN 17129 0.731 - - - - - - 0.731 - - -
52. CSTB ENSGALG00000014410 7346 0.73 - - - - - - - 0.730 - - cystatin B [Source:NCBI gene;Acc:418267]
53. COL18A1 ENSGALG00000038311 11934 0.73 - - - - - - - 0.730 - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
54. MICU3 ENSGALG00000013661 1466 0.728 - - - - - - 0.728 - - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
55. RUFY2 1442 0.728 - - - - - - - 0.728 - - RUN and FYVE domain containing 2, transcript variant X1
56. PTGFRN ENSGALG00000015464 14584 0.728 - - - - - - - 0.728 - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
57. ESRP2 ENSGALG00000003374 4436 0.727 - - - - - - - 0.727 - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
58. KIF16B 4311 0.725 - - - - - - - 0.725 - - kinesin family member 16B, transcript variant X2
59. IFT43 ENSGALG00000020415 1218 0.725 - - - - - - 0.725 - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
60. Sep-07 Sep-07 2939 0.723 - - - - - - - 0.723 - -
61. RNF215 ENSGALG00000040925 19 0.723 - - - - - - - - - 0.723 ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
62. LOC419074 ENSGALG00000017336 1885 0.721 - - - - - - - 0.721 - - F-box/WD repeat-containing protein 7-like, transcript variant X3
63. FNDC3B ENSGALG00000009222 4689 0.721 - - - - - - - 0.721 - - fibronectin type III domain containing 3B [Source:NCBI gene;Acc:424984]
64. ACAD11 ENSGALG00000035949 5483 0.721 - - - - - - - 0.721 - - acyl-CoA dehydrogenase family member 11 [Source:NCBI gene;Acc:420689]
65. NAALADL2 ENSGALG00000023670 39 0.721 - - - - - - - - - 0.721 N-acetylated alpha-linked acidic dipeptidase like 2 [Source:HGNC Symbol;Acc:HGNC:23219]
66. DNASE1L3 386 0.721 - - - - - - - 0.721 - - deoxyribonuclease 1 like 3
67. TRIM59 ENSGALG00000023571 2333 0.72 - - - - - - - 0.720 - - tripartite motif containing 59 [Source:NCBI gene;Acc:425013]
68. KCNJ8 ENSGALG00000026373 1263 0.72 - - - - - - - 0.720 - - potassium voltage-gated channel subfamily J member 8 [Source:NCBI gene;Acc:395973]
69. TBC1D4 ENSGALG00000016925 2961 0.719 - - - - - - - 0.719 - - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
70. MPI ENSGALG00000029296 11781 0.719 - - - - - - - 0.719 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
71. WRAP73 ENSGALG00000001017 430 0.719 - - - - - - 0.719 - - - WD repeat containing, antisense to TP73 [Source:NCBI gene;Acc:419383]
72. ARL13B ENSGALG00000015412 2968 0.719 - - - - - - - 0.719 - - ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
73. TRIM8 ENSGALG00000036785 5304 0.719 - - - - - - - 0.719 - - tripartite motif containing 8 [Source:NCBI gene;Acc:423864]
74. ENSGALG00000008755 ENSGALG00000008755 3523 0.719 - - - - - - - 0.719 - -
75. RNF11 ENSGALG00000010539 8617 0.718 - - - - - - - 0.718 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
76. DLGAP4 ENSGALG00000001046 6872 0.718 - - - - - - 0.718 - - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
77. IRAK1BP1 ENSGALG00000015892 2236 0.718 - - - - - - 0.718 - - - interleukin 1 receptor associated kinase 1 binding protein 1 [Source:NCBI gene;Acc:421857]
78. PRRG3 ENSGALG00000027977 1295 0.717 - - - - - - - 0.717 - - proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]
79. ENSGALG00000007514 ENSGALG00000007514 4866 0.717 - - - - - - - 0.717 - -
80. AASDHPPT ENSGALG00000027981 1017 0.716 - - - - - - - 0.716 - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
81. DDX42 ENSGALG00000000581 8780 0.716 - - - - - - - 0.716 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
82. SPPL3 ENSGALG00000006979 3264 0.716 - - - - - - - 0.716 - - signal peptide peptidase like 3 [Source:HGNC Symbol;Acc:HGNC:30424]
83. DCAF17 ENSGALG00000037327 1069 0.715 - - - - - - - 0.715 - - DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:HGNC:25784]
84. APITD1 APITD1 11830 0.715 - - - - - - - 0.715 - -
85. TMEM200C ENSGALG00000030210 1434 0.714 - - - - - - 0.714 - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
86. ARPC4 ENSGALG00000006691 33311 0.714 - - - - - - - 0.714 - - actin related protein 2/3 complex subunit 4 [Source:NCBI gene;Acc:416051]
87. ANKZF1 ENSGALG00000011332 2247 0.714 - - - - - - - 0.714 - - ankyrin repeat and zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25527]
88. TNFAIP8 ENSGALG00000027761 2383 0.713 - - - - - - - 0.713 - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
89. SYNGR2 ENSGALG00000027902 6953 0.713 - - - - - - - 0.713 - - Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
90. TFB2M ENSGALG00000010651 4374 0.713 - - - - - - - 0.713 - - transcription factor B2, mitochondrial
91. PAM ENSGALG00000015256 3399 0.712 - - - - - - 0.712 - - - peptidylglycine alpha-amidating monooxygenase [Source:HGNC Symbol;Acc:HGNC:8596]
92. TRIM37 ENSGALG00000005084 4036 0.712 - - - - - - - 0.712 - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
93. RABEPK ENSGALG00000042210 4492 0.712 - - - - - - 0.712 - - - Rab9 effector protein with kelch motifs [Source:NCBI gene;Acc:772357]
94. TIAR TIAR 2471 0.712 - - - - - - - 0.712 - -
95. PIK3IP1 ENSGALG00000006942 8388 0.712 - - - - - - 0.712 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
96. RARRES2 ENSGALG00000042642 3043 0.711 - - - - - - - 0.711 - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
97. AMT ENSGALG00000025844 4465 0.711 - - - - - - - 0.711 - - aminomethyltransferase [Source:NCBI gene;Acc:395566]
98. MASP1 ENSGALG00000007419 141 0.711 - - - - - - - 0.711 - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
99. TRAF7 ENSGALG00000005767 4615 0.71 - - - - - - 0.710 - - - TNF receptor associated factor 7 [Source:NCBI gene;Acc:416555]
100. THAP9 ENSGALG00000044141 1993 0.709 - - - - - - - - - 0.709 THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]

There are 28 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA