Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMCO1

Gene Name Gene ID Reads Annotation
TMCO1 ENSGALG00000033460 22822 transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]











Genes with expression patterns similar to TMCO1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMCO1 ENSGALG00000033460 22822 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]
2. EIF3B ENSGALG00000040999 49971 1.587 - - - - - - 0.747 0.840 - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
3. MRPL20 ENSGALG00000001542 28764 1.568 - - 0.751 - - - 0.817 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
4. TOMM22 ENSGALG00000019316 27323 1.554 - - 0.704 - - - 0.850 - - - translocase of outer mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:18002]
5. USP5 ENSGALG00000014525 21883 1.494 - - 0.763 - - - 0.731 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
6. COX20 ENSGALG00000027440 5881 1.49 - - - - - - 0.773 0.717 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
7. U2AF1 ENSGALG00000016198 45027 0.928 - - - - - - - 0.928 - - U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:395370]
8. CPSF4 ENSGALG00000004714 14353 0.905 - - - - - - 0.905 - - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
9. ENSGALG00000006463 ENSGALG00000006463 45151 0.903 - - - - - - 0.903 - - -
10. ENSGALG00000014852 ENSGALG00000014852 15288 0.892 - - - - - - 0.892 - - -
11. PPAT ENSGALG00000013728 7563 0.882 - - - - - - 0.882 - - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
12. NDUFS8 ENSGALG00000040173 24745 0.879 - - - - - - 0.879 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
13. MTAP ENSGALG00000008174 10976 0.879 - - - - - - 0.879 - - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
14. TXNDC12 ENSGALG00000010569 13822 0.876 - - - - - - 0.876 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
15. C C 7669 0.873 - - - - - - 0.873 - - -
16. RALB ENSGALG00000026493 14590 0.869 - - - - - - 0.869 - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
17. ADSS ENSGALG00000010702 7207 0.867 - - - - - - 0.867 - - - adenylosuccinate synthase [Source:NCBI gene;Acc:428579]
18. MCM5 ENSGALG00000012546 18254 0.866 - - - - - - 0.866 - - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
19. RER1 ENSGALG00000021683 9074 0.866 - - - - - - 0.866 - - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
20. SOD1 ENSGALG00000015844 35836 0.862 - - - - - - 0.862 - - - superoxide dismutase 1, soluble [Source:NCBI gene;Acc:395938]
21. AATF ENSGALG00000005420 6501 0.859 - - - - - - 0.859 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
22. FAM136A ENSGALG00000042163 39487 0.858 - - - - - - 0.858 - - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
23. BLMH ENSGALG00000004259 36907 0.858 - - - - - - 0.858 - - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
24. MYCBP ENSGALG00000024295 13273 0.853 - - - - - - 0.853 - - - MYC binding protein
25. DNAJC9 ENSGALG00000002701 19249 0.853 - - - - - - 0.853 - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
26. DJ-1 DJ-1 13462 0.852 - - - - - - 0.852 - - -
27. Sep-15 Sep-15 6935 0.851 - - - - - - 0.851 - - -
28. PPIH ENSGALG00000004874 25558 0.85 - - - - - - 0.850 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
29. DOCK7 6385 0.847 - - - - - - 0.847 - - - dedicator of cytokinesis 7, transcript variant X3
30. HMGN1 ENSGALG00000016067 17375 0.844 - - - - - - 0.844 - - - high mobility group nucleosome binding domain 1 [Source:NCBI gene;Acc:395999]
31. CNOT2 ENSGALG00000010042 7612 0.844 - - - - - - 0.844 - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
32. PCNP ENSGALG00000015330 15750 0.844 - - - - - - 0.844 - - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
33. MRPS9 ENSGALG00000016794 5875 0.842 - - - - - - 0.842 - - - mitochondrial ribosomal protein S9 [Source:NCBI gene;Acc:418723]
34. SLC25A39 ENSGALG00000042894 10654 0.841 - - - - - - 0.841 - - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
35. LUC7L2 ENSGALG00000036238 11817 0.839 - - - - - - 0.839 - - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
36. NTAN1 ENSGALG00000040905 7713 0.836 - - - - - - 0.836 - - - N-terminal asparagine amidase [Source:HGNC Symbol;Acc:HGNC:29909]
37. ZMAT2 ENSGALG00000041746 23601 0.836 - - - - - - 0.836 - - - zinc finger matrin-type 2 [Source:NCBI gene;Acc:427602]
38. TRNT1 ENSGALG00000017368 11932 0.834 - - - - - - 0.834 - - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
39. PRELID1 ENSGALG00000002990 55592 0.834 - - - - - - 0.834 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
40. ELOVL5 ENSGALG00000016314 18163 0.833 - - - - - - 0.833 - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
41. PDPK1 ENSGALG00000006418 13412 0.83 - - - - - - 0.830 - - - 3-phosphoinositide dependent protein kinase 1 [Source:NCBI gene;Acc:416588]
42. MT-ND4L MT-ND4L 12537 0.83 - - - - - - 0.830 - - -
43. SEC11A ENSGALG00000037553 32123 0.83 - - - - - - 0.830 - - - SEC11 homolog A, signal peptidase complex subunit [Source:NCBI gene;Acc:415334]
44. STRN3 ENSGALG00000040464 9045 0.826 - - - - - - 0.826 - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
45. RCN2 ENSGALG00000039284 17848 0.825 - - - - - - 0.825 - - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
46. CAT ENSGALG00000030187 7534 0.823 - - - - - - 0.823 - - - catalase [Source:NCBI gene;Acc:423600]
47. PPP1R7 ENSGALG00000031766 22187 0.823 - - - - - - 0.823 - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
48. SIKE1 ENSGALG00000002147 20836 0.822 - - - - - - 0.822 - - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
49. DUT ENSGALG00000038032 34659 0.821 - - - - - - 0.821 - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
50. NUTF2 ENSGALG00000001602 32832 0.821 - - - - - - 0.821 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
51. ADAR ENSGALG00000021475 6004 0.82 - - - - - - 0.820 - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
52. HADHB ENSGALG00000016555 24530 0.82 - - - - - - 0.820 - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:HGNC Symbol;Acc:HGNC:4803]
53. PDCD10 ENSGALG00000009477 7061 0.818 - - - - - - 0.818 - - - programmed cell death 10 [Source:NCBI gene;Acc:425003]
54. SERINC1 ENSGALG00000014868 12484 0.818 - - - - - - 0.818 - - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
55. ENSGALG00000000514 ENSGALG00000000514 9906 0.818 - - - - - - 0.818 - - -
56. YIPF1 5945 0.816 - - - - - - 0.816 - - - Yip1 domain family member 1, transcript variant 4
57. ANAPC16 ENSGALG00000004410 18001 0.816 - - - - - - 0.816 - - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
58. PGRMC1 ENSGALG00000020260 19059 0.815 - - - - - - 0.815 - - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
59. C1H11ORF73 C1H11ORF73 10071 0.815 - - - - - - 0.815 - - -
60. NIFK ENSGALG00000011650 14990 0.815 - - - - - - 0.815 - - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
61. NDUFS7 ENSGALG00000009703 19674 0.813 - - - - - - 0.813 - - - NADH:ubiquinone oxidoreductase core subunit S7 [Source:HGNC Symbol;Acc:HGNC:7714]
62. PITPNB ENSGALG00000005654 21578 0.813 - - - - - - 0.813 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
63. ILK ENSGALG00000031642 11321 0.812 - - - - - - 0.812 - - - integrin linked kinase [Source:NCBI gene;Acc:374018]
64. NAA38 ENSGALG00000045783 11229 0.81 - - - - - - 0.810 - - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
65. TACC3 ENSGALG00000015709 17336 0.81 - - - - - - 0.810 - - - transforming acidic coiled-coil containing protein 3 [Source:NCBI gene;Acc:422899]
66. SAR1A ENSGALG00000004431 28833 0.81 - - - - - - 0.810 - - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
67. DPP9 ENSGALG00000004200 4515 0.809 - - - - - - 0.809 - - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
68. G3BP1 ENSGALG00000004160 36795 0.809 - - - - - - 0.809 - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
69. FOXK2 ENSGALG00000001577 6346 0.803 - - - - - - 0.803 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
70. FBXO9 ENSGALG00000016320 9600 0.802 - - - - - - 0.802 - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
71. C10orf88 ENSGALG00000000011 6026 0.801 - - - - - - 0.801 - - - chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:25822]
72. C4orf46 ENSGALG00000009432 3255 0.799 - - - - - - 0.799 - - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
73. MLLT10 ENSGALG00000007928 4022 0.799 - - - - - - 0.799 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
74. ENSGALG00000013067 ENSGALG00000013067 10741 0.797 - - - - - - 0.797 - - -
75. MRPS35 ENSGALG00000036730 6327 0.795 - - - - - - 0.795 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
76. UQCR10 ENSGALG00000008066 52968 0.795 - - - - - - 0.795 - - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
77. ZC3H13 ENSGALG00000016984 21043 0.795 - - - - - - 0.795 - - - zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
78. NIPSNAP3L ENSGALG00000027334 7514 0.794 - - - - - - 0.794 - - - nipsnap homolog 3-like
79. POLR2H ENSGALG00000008534 21521 0.794 - - - - - - 0.794 - - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
80. ARFIP1 ENSGALG00000041361 7351 0.794 - - - - - - 0.794 - - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
81. CCDC53 CCDC53 3732 0.792 - - - - - - 0.792 - - -
82. HOXA7 ENSGALG00000026989 6746 0.791 - - - - - - 0.791 - - - homeobox A7 [Source:NCBI gene;Acc:395290]
83. ERLIN1 ENSGALG00000003308 6427 0.788 - - - - - - 0.788 - - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
84. DEK ENSGALG00000012684 14179 0.788 - - - - - - 0.788 - - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
85. CEPT1 ENSGALG00000000142 4219 0.787 - - - - - - 0.787 - - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
86. SSBP1 ENSGALG00000012876 34256 0.786 - - - - - - 0.786 - - - single stranded DNA binding protein 1 [Source:NCBI gene;Acc:418122]
87. TM9SF2 ENSGALG00000016878 11548 0.786 - - - - - - 0.786 - - - transmembrane 9 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11865]
88. RPL22 ENSGALG00000000719 74238 0.786 - - - - - - 0.786 - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
89. RAB11B ENSGALG00000000613 20696 0.786 - - - - - - 0.786 - - - RAB11B, member RAS oncogene family [Source:NCBI gene;Acc:420063]
90. LPCAT3 ENSGALG00000014570 7919 0.785 - - - - - - 0.785 - - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
91. TRABD ENSGALG00000030705 6577 0.785 - - - - - - 0.785 - - - TraB domain containing [Source:NCBI gene;Acc:417746]
92. NUP37 ENSGALG00000012759 9985 0.784 - - - - - - 0.784 - - - nucleoporin 37 [Source:NCBI gene;Acc:418093]
93. PGD ENSGALG00000002797 15115 0.783 - - - - - - 0.783 - - - phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
94. HMGB2 ENSGALG00000010745 89235 0.781 - - - - - - 0.781 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
95. NDUFAB1 ENSGALG00000006073 40467 0.78 - - - - - - 0.780 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
96. TMED7 ENSGALG00000028484 21008 0.78 - - - - - - 0.780 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
97. SFPQ ENSGALG00000002514 66832 0.779 - - - - - - 0.779 - - - splicing factor proline and glutamine rich [Source:HGNC Symbol;Acc:HGNC:10774]
98. COMMD5 ENSGALG00000008867 12173 0.778 - - - - - - 0.778 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
99. BUD31 ENSGALG00000004705 19474 0.778 - - - - - - 0.778 - - - BUD31 homolog [Source:HGNC Symbol;Acc:HGNC:29629]
100. RALGPS1 ENSGALG00000000906 7207 0.778 - - - - - - 0.778 - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]

There are 197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA