Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMC3

Gene Name Gene ID Reads Annotation
TMC3 ENSGALG00000006376 12 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]











Genes with expression patterns similar to TMC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMC3 ENSGALG00000006376 12 5 - - 1.000 1.000 - 1.000 - 1.000 - 1.000 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
2. FBXL4 ENSGALG00000015490 12 2.625 - - - 0.923 - 0.785 - 0.917 - - F-box and leucine rich repeat protein 4 [Source:HGNC Symbol;Acc:HGNC:13601]
3. ABCB1LB ABCB1LB 4 2 - - - - - - - 1.000 - 1.000
4. FGF16 ENSGALG00000007806 8 1.923 - - - 0.923 - - - - - 1.000 fibroblast growth factor 16 [Source:NCBI gene;Acc:422330]
5. LAMB4 ENSGALG00000007917 54 1.798 - - - - - - - 0.905 - 0.893 laminin subunit beta 4 [Source:NCBI gene;Acc:396076]
6. SLC35F5 ENSGALG00000012166 25 1.72 - - - - - 0.810 - 0.910 - - solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]
7. NOXRED1 ENSGALG00000042509 27 1.642 - - 0.780 - - - - - - 0.862 NADP dependent oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20487]
8. BRD8 ENSGALG00000037646 100 1 - - - - - - - 1.000 - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
9. LRRC56 ENSGALG00000041955 16 1 - - - 1.000 - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
10. C18H17ORF67 ENSGALG00000024428 10 1 - - - - - - - - - 1.000 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
11. ANKRD27 ENSGALG00000004671 26 1 - - - - - - - 1.000 - - ankyrin repeat domain 27 [Source:NCBI gene;Acc:415766]
12. SNORD61 SNORD61 12 1 - - - - - - - - - 1.000
13. DDO ENSGALG00000015057 25 1 - - - - - - - - - 1.000 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
14. VTG1 ENSGALG00000039354 17 1 - - - - - - - - - 1.000 vitellogenin 1 [Source:NCBI gene;Acc:424547]
15. ISM2 ENSGALG00000010468 1 1 - - - - - - - - - 1.000 isthmin 2, transcript variant X2
16. RAP2A ENSGALG00000016889 26 1 - - - - - - - - - 1.000 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
17. UPK3A ENSGALG00000014227 7 1 - - - - - - - - - 1.000 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
18. PROSER1 ENSGALG00000017038 8 1 - - - - - - - 1.000 - - proline and serine rich 1 [Source:HGNC Symbol;Acc:HGNC:20291]
19. CD40 ENSGALG00000007015 7 1 - - - - - - - - - 1.000 CD40 molecule [Source:NCBI gene;Acc:395385]
20. FAM160A2 ENSGALG00000003416 23 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A2 [Source:HGNC Symbol;Acc:HGNC:25378]
21. ENPP3 ENSGALG00000037587 25 1 - - - - - - - - - 1.000 ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
22. CAMK1 ENSGALG00000029912 6 1 - - - - - - - - - 1.000 calcium/calmodulin dependent protein kinase I [Source:HGNC Symbol;Acc:HGNC:1459]
23. CALML3 ENSGALG00000008424 88 1 - - - - - - - - - 1.000 calmodulin like 3 [Source:NCBI gene;Acc:416692]
24. CHST9 ENSGALG00000019489 21 1 - - - - - - - 1.000 - - carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
25. CLDN15 ENSGALG00000038964 21 1 - - - - - - - - - 1.000 claudin 15, transcript variant X4
26. ENSGALG00000024381 ENSGALG00000024381 9 1 - - - - - - - - - 1.000
27. ENSGALG00000025879 ENSGALG00000025879 3 1 - - - - - - - - - 1.000
28. HOXA1 ENSGALG00000028095 137 1 - - - - - - - - - 1.000 homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
29. ENSGALG00000026501 ENSGALG00000026501 39 1 - - - - - - - - - 1.000
30. ENSGALG00000000443 ENSGALG00000000443 2 1 - - - - - - - - - 1.000
31. GDA ENSGALG00000015141 21 1 - - - - - - - - - 1.000 guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
32. KCNA4 ENSGALG00000012142 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
33. IL16 ENSGALG00000006388 3 1 - - - - - - - - - 1.000 interleukin 16 [Source:NCBI gene;Acc:374270]
34. ATF6 ENSGALG00000032278 71 1 - - - - - - - 1.000 - - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
35. PDCL2 ENSGALG00000013783 9 1 - - - - - - - - - 1.000 phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
36. OPN4-1 ENSGALG00000041662 10 1 - - - - - - - - - 1.000 photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
37. TMX1 ENSGALG00000020340 6 1 - - - - - - - 1.000 - - thioredoxin related transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:15487]
38. HCRT ENSGALG00000011485 62 1 - - - - - - - 1.000 - - hypocretin neuropeptide precursor [Source:NCBI gene;Acc:374005]
39. LRRC47 7 1 - - - - - - - - - 1.000 leucine rich repeat containing 47
40. ST8SIA5 ENSGALG00000035927 4 1 - - - - - - - 1.000 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:NCBI gene;Acc:414797]
41. CECR2 ENSGALG00000013034 12 1 - - - - - - - - - 1.000 CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
42. ENSGALG00000027597 ENSGALG00000027597 13 1 - - - - - - - - - 1.000
43. DCHS1 ENSGALG00000017334 12 0.992 - - - - - - - - - 0.992 dachsous cadherin-related 1, transcript variant X1
44. C9orf3 C9orf3 47 0.99 - - - - - - - 0.990 - -
45. MFN2 ENSGALG00000004523 10 0.979 - - - - - - - - - 0.979 mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]
46. WNT6 ENSGALG00000011358 1886 0.974 - - - - - - - - - 0.974 Wnt family member 6 [Source:NCBI gene;Acc:395235]
47. RNF151 ENSGALG00000034803 16 0.95 - - - - - - - 0.950 - - ring finger protein 151, transcript variant X2
48. TRMT13 ENSGALG00000005290 95 0.95 - - - - - - - 0.950 - - tRNA methyltransferase 13 homolog [Source:HGNC Symbol;Acc:HGNC:25502]
49. NKX2-8 ENSGALG00000028483 174 0.944 - - - - - - - 0.944 - - NK2 homeobox 8 [Source:HGNC Symbol;Acc:HGNC:16364]
50. CLDN12 ENSGALG00000009038 16 0.943 - - - - - - - 0.943 - - claudin 12 [Source:HGNC Symbol;Acc:HGNC:2034]
51. MMR1L3 ENSGALG00000008638 26 0.938 - - - - - - - 0.938 - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
52. SDR42E2 ENSGALG00000006964 57 0.934 - - - - - - - - - 0.934 short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
53. MSGN1 ENSGALG00000016469 17 0.93 - - - - - - - 0.930 - - mesogenin 1 [Source:NCBI gene;Acc:395419]
54. WARS2 ENSGALG00000014772 29 0.929 - - - - - 0.929 - - - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
55. BAIAP2L2 ENSGALG00000012285 2 0.923 - - - 0.923 - - - - - - BAI1 associated protein 2 like 2 [Source:HGNC Symbol;Acc:HGNC:26203]
56. ENSGALG00000023692 ENSGALG00000023692 6 0.923 - - - 0.923 - - - - - -
57. ENSGALG00000001552 ENSGALG00000001552 4 0.923 - - - 0.923 - - - - - -
58. ENSGALG00000004223 ENSGALG00000004223 7 0.923 - - - 0.923 - - - - - -
59. PEAR1 ENSGALG00000028622 127 0.923 - - - 0.923 - - - - - - platelet endothelial aggregation receptor 1 [Source:HGNC Symbol;Acc:HGNC:33631]
60. LOC416959 ENSGALG00000006838 3 0.923 - - - 0.923 - - - - - - melanotransferrin-like, transcript variant X10
61. LINS LINS 18 0.923 - - - 0.923 - - - - - -
62. SRD5A2 ENSGALG00000010625 23 0.923 - - - - - - - - - 0.923 steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
63. FAM65B ENSGALG00000013624 2 0.923 - - - 0.923 - - - - - - family with sequence similarity 65, member B [Source:NCBI gene;Acc:421003]
64. ICMT ENSGALG00000024053 10 0.923 - - - 0.923 - - - - - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
65. GMPR ENSGALG00000012705 30 0.922 - - - - - - - 0.922 - - guanosine monophosphate reductase [Source:NCBI gene;Acc:420842]
66. SCN1A ENSGALG00000010943 6 0.913 - - - - - - - - - 0.913 sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]
67. TMEM72 ENSGALG00000026808 5 0.913 - - - - - - - - - 0.913 transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
68. CMTR1 ENSGALG00000010149 12 0.913 - - - - - - - - - 0.913 cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
69. CD320 ENSGALG00000021688 3 0.913 - - - - - - - - - 0.913 CD320 molecule [Source:NCBI gene;Acc:420066]
70. ENSGALG00000016214 ENSGALG00000016214 26 0.912 - - - - - - - 0.912 - -
71. F7 ENSGALG00000016833 4 0.911 - - - 0.911 - - - - - - coagulation factor VII [Source:NCBI gene;Acc:395086]
72. CBX7 ENSGALG00000041236 14 0.911 - - - 0.911 - - - - - - chromobox 7 [Source:HGNC Symbol;Acc:HGNC:1557]
73. gga-mir-6585 ENSGALG00000027202 102 0.91 - - - - - - - 0.910 - - gga-mir-6585 [Source:miRBase;Acc:MI0022405]
74. HPS6 ENSGALG00000020741 4 0.907 - - 0.907 - - - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
75. GABRG1 ENSGALG00000020143 5 0.905 - - 0.905 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
76. GIF ENSGALG00000031546 2 0.905 - - 0.905 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
77. MYRFL ENSGALG00000019352 2 0.905 - - 0.905 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
78. ENSGALG00000009969 ENSGALG00000009969 2 0.905 - - 0.905 - - - - - - -
79. CSF3R ENSGALG00000002112 2 0.905 - - 0.905 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
80. VCAM1 ENSGALG00000005257 102 0.905 - - 0.905 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
81. DOK4 ENSGALG00000001160 2 0.905 - - 0.905 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
82. TAPP2 TAPP2 2 0.905 - - 0.905 - - - - - - -
83. PABPC1L ENSGALG00000004123 2 0.905 - - 0.905 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
84. RHCG ENSGALG00000006635 7 0.905 - - 0.905 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
85. PDE1A ENSGALG00000008885 4 0.905 - - 0.905 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
86. AGRP ENSGALG00000002244 27 0.905 - - 0.905 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
87. CLDN10 ENSGALG00000019114 2 0.903 - - 0.903 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
88. DNAL1 ENSGALG00000028568 124 0.897 - - - - - 0.897 - - - - dynein axonemal light chain 1 [Source:NCBI gene;Acc:423246]
89. ALOX5AP ENSGALG00000026781 28 0.894 - - - - - - - 0.894 - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
90. EFCC1 ENSGALG00000005024 51 0.891 - - - - - - - 0.891 - - EF-hand and coiled-coil domain containing 1, transcript variant X6
91. POF1B ENSGALG00000006919 7 0.877 - - - 0.877 - - - - - - POF1B, actin binding protein [Source:HGNC Symbol;Acc:HGNC:13711]
92. ENSGALG00000000193 ENSGALG00000000193 19 0.876 - - - - - 0.876 - - - -
93. SLC22A13 ENSGALG00000005934 8 0.871 - - - - - - - - - 0.871 solute carrier family 22 member 13
94. FRK ENSGALG00000014979 65 0.87 - - - - - - - 0.870 - - fyn related Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3955]
95. C8H1ORF52 C8H1ORF52 118 0.867 - - - - - - - 0.867 - -
96. ARSD ENSGALG00000016648 33 0.863 - - - - - - - - - 0.863 arylsulfatase D, transcript variant X1
97. PTPN3 ENSGALG00000022909 6 0.86 - - - 0.860 - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
98. UPB1 ENSGALG00000006627 139 0.859 - - 0.859 - - - - - - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
99. MZB1 ENSGALG00000044427 6 0.859 - - 0.859 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
100. CD101 12 0.859 - - 0.859 - - - - - - - CD101 molecule, transcript variant X4

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA