Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TMA16

Gene Name Gene ID Reads Annotation
TMA16 ENSGALG00000009501 6651 translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]











Genes with expression patterns similar to TMA16

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TMA16 ENSGALG00000009501 6651 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
2. SERINC1 ENSGALG00000014868 12484 1.743 - - - - - - 0.829 0.914 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
3. ESRRG ENSGALG00000009645 2783 1.736 - - - - - - - 0.908 - 0.828 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
4. CNEP1R1 ENSGALG00000029793 6536 1.724 - - - - - - 0.796 0.928 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
5. OSBPL1A ENSGALG00000015086 2702 1.709 - - - - - - - 0.893 - 0.816 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
6. ZBED4 ENSGALG00000032659 5313 1.674 - - - - - - - 0.919 - 0.755 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
7. CHMP2B ENSGALG00000015496 3973 1.664 - - - - - - 0.778 0.886 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
8. COG5 ENSGALG00000042764 4205 1.649 - - - - - - - 0.877 - 0.772 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
9. DNA2 ENSGALG00000004037 5426 1.641 - - - - - - - 0.914 - 0.727 DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
10. PCNP ENSGALG00000015330 15750 1.614 - - - - - - 0.801 - - 0.813 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
11. TAF1B ENSGALG00000016437 2318 1.605 - - - - - - 0.724 0.881 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
12. ENSGALG00000026433 ENSGALG00000026433 14463 1.601 - - - - - - 0.799 - - 0.802
13. C10ORF58 C10ORF58 5045 1.6 - - - - - - - 0.885 - 0.715
14. TBPL1 ENSGALG00000013981 3710 1.597 - - - - - - 0.810 - - 0.787 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
15. RHOT1 ENSGALG00000003397 5149 1.579 - - - - - - 0.829 - - 0.750 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
16. MPP5 ENSGALG00000009581 724 1.576 - - - - - - - 0.812 - 0.764 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
17. GPX8 ENSGALG00000026704 4497 1.556 - - - - - - 0.841 - - 0.715 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
18. MYEOV2 MYEOV2 5155 1.553 - - - - - - 0.779 - - 0.774
19. PWP1 ENSGALG00000012631 10536 1.538 - - - - - - 0.816 - - 0.722 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
20. DUT ENSGALG00000038032 34659 1.531 - - - - - - 0.811 0.720 - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
21. PGD ENSGALG00000002797 15115 1.52 - - - - - - 0.758 - - 0.762 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
22. LACTB2 ENSGALG00000038745 3460 1.507 - - - - - - - 0.777 - 0.730 lactamase beta 2 [Source:NCBI gene;Acc:420178]
23. RSRC2 ENSGALG00000004493 9008 1.502 - - - - - - 0.707 0.795 - - arginine and serine rich coiled-coil 2 [Source:NCBI gene;Acc:416864]
24. RER1 ENSGALG00000021683 9074 1.502 - - - - - - 0.731 - - 0.771 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
25. ADIPOR2 ENSGALG00000035533 6523 1.493 - - - - - - 0.754 - - 0.739 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
26. EIF2B2 ENSGALG00000010301 10772 1.491 - - - - - - 0.758 - - 0.733 eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
27. JUP ENSGALG00000017414 6920 1.49 - - - - - - - 0.762 - 0.728 junction plakoglobin [Source:NCBI gene;Acc:429710]
28. BET1 ENSGALG00000024485 2451 1.49 - - 0.726 - - - - - - 0.764 Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
29. RWDD2B ENSGALG00000015807 3601 1.486 - - 0.707 - - - - - - 0.779 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
30. TMED7 ENSGALG00000028484 21008 1.479 - - - - - - 0.725 - - 0.754 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
31. TMEM185A ENSGALG00000009139 4424 0.94 - - - - - - - 0.940 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
32. ENSGALG00000014375 ENSGALG00000014375 4741 0.939 - - - - - - - 0.939 - -
33. ZNF598 ENSGALG00000005598 8270 0.926 - - - - - - - 0.926 - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
34. TMEM33 ENSGALG00000014248 6069 0.917 - - - - - - - 0.917 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
35. STX16 ENSGALG00000007541 6458 0.916 - - - - - - - 0.916 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
36. FAM206A ENSGALG00000019524 7170 0.914 - - - - - - - 0.914 - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
37. ATAD2 ENSGALG00000034348 4440 0.911 - - - - - - - 0.911 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
38. RGN ENSGALG00000016724 3184 0.909 - - - - - - - 0.909 - - regucalcin [Source:NCBI gene;Acc:395480]
39. POLR1C ENSGALG00000010349 7059 0.905 - - - - - - - 0.905 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
40. GOLPH3 ENSGALG00000028267 9692 0.903 - - - - - - - 0.903 - - golgi phosphoprotein 3, transcript variant X1
41. TNNC1 ENSGALG00000001459 7110 0.901 - - - - - - - 0.901 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
42. TST ENSGALG00000012488 5314 0.9 - - - - - - - 0.900 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
43. ATXN2 ENSGALG00000004625 6306 0.899 - - - - - - - 0.899 - - ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]
44. XPR1 ENSGALG00000003893 5642 0.897 - - - - - - 0.897 - - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
45. PPM1B ENSGALG00000030691 4513 0.894 - - - - - - - 0.894 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
46. MAP3K4 ENSGALG00000020003 6378 0.893 - - - - - - - 0.893 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
47. SUN1 ENSGALG00000003781 3442 0.892 - - - - - - - 0.892 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
48. CHCHD6 ENSGALG00000006056 6121 0.89 - - - - - - - 0.890 - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
49. ENSGALG00000017324 ENSGALG00000017324 8235 0.888 - - - - - - - 0.888 - -
50. ENSGALG00000009863 ENSGALG00000009863 7375 0.888 - - - - - - - 0.888 - -
51. OSR1 ENSGALG00000016473 1202 0.887 - - - - - - - 0.887 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
52. gga-mir-6596 ENSGALG00000026117 2893 0.886 - - - - - - - 0.886 - - gga-mir-6596 [Source:miRBase;Acc:MI0022416]
53. PDGF-A PDGF-A 5166 0.886 - - - - - - - 0.886 - -
54. NIPSNAP3L ENSGALG00000027334 7514 0.886 - - - - - - 0.886 - - - nipsnap homolog 3-like
55. NUP88 ENSGALG00000032280 9847 0.886 - - - - - - - 0.886 - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
56. PLA2G12A ENSGALG00000012185 5261 0.886 - - - - - - - 0.886 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
57. HEY1 ENSGALG00000035031 8795 0.885 - - - - - - - 0.885 - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
58. PDP1 ENSGALG00000034876 2965 0.884 - - - - - - 0.884 - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]
59. MKP3 MKP3 4418 0.884 - - - - - - - 0.884 - -
60. UCHL3 ENSGALG00000016921 16208 0.884 - - - - - - - - - 0.884 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
61. CENPI ENSGALG00000005038 2608 0.884 - - - - - - - 0.884 - - centromere protein I [Source:NCBI gene;Acc:395207]
62. ZBTB24 ENSGALG00000015231 1384 0.883 - - - - - - - 0.883 - - zinc finger and BTB domain containing 24 [Source:HGNC Symbol;Acc:HGNC:21143]
63. MRPL39 ENSGALG00000015742 7025 0.882 - - - - - - - 0.882 - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
64. CLUAP1 ENSGALG00000030877 4269 0.882 - - - - - - - 0.882 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
65. PPP1CB ENSGALG00000010026 6909 0.88 - - - - - - - 0.880 - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
66. DNAJC3 ENSGALG00000016894 9048 0.88 - - - - - - - 0.880 - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
67. SRP19 ENSGALG00000000218 14207 0.88 - - - - - - - 0.880 - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
68. RPS6KA RPS6KA 6745 0.879 - - - - - - - 0.879 - -
69. NDUFA4 ENSGALG00000025999 53323 0.879 - - - - - - - - - 0.879 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
70. NDUFS8 ENSGALG00000040173 24745 0.878 - - - - - - 0.878 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
71. TTPAL ENSGALG00000004244 2734 0.877 - - - - - - - 0.877 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
72. ZMYM3 ENSGALG00000005533 2927 0.876 - - - - - - - 0.876 - - zinc finger MYM-type containing 3 [Source:HGNC Symbol;Acc:HGNC:13054]
73. USP12P1 USP12P1 4193 0.876 - - - - - - - 0.876 - -
74. XRCC3 ENSGALG00000011533 3768 0.875 - - - - - - - 0.875 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
75. C1orf50 ENSGALG00000004800 4894 0.875 - - - - - - - 0.875 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
76. ZC3H7A ENSGALG00000003143 7114 0.873 - - - - - - 0.873 - - - zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:HGNC:30959]
77. FBXW5 ENSGALG00000030831 5927 0.873 - - - - - - - 0.873 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
78. COMMD5 ENSGALG00000008867 12173 0.871 - - - - - - 0.871 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
79. LSMD1 LSMD1 2562 0.87 - - - - - - - 0.870 - -
80. RHPN2 ENSGALG00000004814 1865 0.869 - - - - - - - 0.869 - - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
81. ADAR ENSGALG00000021475 6004 0.867 - - - - - - 0.867 - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
82. gga-mir-1737 ENSGALG00000025206 3910 0.864 - - - - - - - 0.864 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
83. CUL5 ENSGALG00000017165 2480 0.864 - - - - - - - 0.864 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
84. DMTF1 ENSGALG00000030844 3584 0.864 - - - - - - - 0.864 - - cyclin D binding myb like transcription factor 1 [Source:NCBI gene;Acc:418646]
85. HAUS6 ENSGALG00000015091 9671 0.863 - - - - - - - 0.863 - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
86. GTF2H4 GTF2H4 5227 0.862 - - - - - - - 0.862 - -
87. CLCN7 ENSGALG00000030826 3173 0.86 - - - - - - - 0.860 - - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]
88. SIPA1L2 ENSGALG00000037506 3651 0.86 - - - - - - - 0.860 - - signal induced proliferation associated 1 like 2 [Source:HGNC Symbol;Acc:HGNC:23800]
89. MADH2 MADH2 13017 0.86 - - - - - - - 0.860 - -
90. WDYHV1 ENSGALG00000030059 2961 0.86 - - - - - - - 0.860 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
91. NUDT4 ENSGALG00000011285 2998 0.86 - - - - - - - 0.860 - - nudix hydrolase 4, transcript variant X5
92. TRABD ENSGALG00000030705 6577 0.858 - - - - - - 0.858 - - - TraB domain containing [Source:NCBI gene;Acc:417746]
93. FOXK2 ENSGALG00000001577 6346 0.857 - - - - - - 0.857 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
94. SPTSSA ENSGALG00000025755 3361 0.857 - - - - - - - - - 0.857 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
95. CROT ENSGALG00000008813 8052 0.856 - - - - - - 0.856 - - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
96. CHTF8 ENSGALG00000000632 7230 0.855 - - - - - - - 0.855 - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
97. MST4 MST4 1931 0.855 - - - - - - - 0.855 - -
98. SURF1 ENSGALG00000033754 2130 0.853 - - - - - - - 0.853 - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
99. ALDH7A1 ENSGALG00000008229 5891 0.852 - - - - - - - - - 0.852 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
100. SMARCD2 ENSGALG00000029304 11867 0.852 - - - - - - - 0.852 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]

There are 625 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA