Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TM6SF1

Gene Name Gene ID Reads Annotation
TM6SF1 ENSGALG00000006027 20 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]











Genes with expression patterns similar to TM6SF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TM6SF1 ENSGALG00000006027 20 4 - - 1.000 1.000 1.000 - - - - 1.000 transmembrane 6 superfamily member 1 [Source:NCBI gene;Acc:415462]
2. TGFBRAP1 ENSGALG00000016795 81 1.782 - - - - 0.869 - - - - 0.913 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
3. HHIPL2 ENSGALG00000045729 9 1 - - - 1.000 - - - - - - HHIP like 2 [Source:HGNC Symbol;Acc:HGNC:25842]
4. ING5 ENSGALG00000006317 149 0.976 - - - - - - - - - 0.976 inhibitor of growth family member 5 [Source:NCBI gene;Acc:424852]
5. TRAK2 ENSGALG00000008370 46 0.97 - - - - - - - - - 0.970 trafficking kinesin protein 2 [Source:HGNC Symbol;Acc:HGNC:13206]
6. AKAP11 ENSGALG00000022739 82 0.969 - - - - - - - - - 0.969 A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
7. BOK ENSGALG00000005772 117 0.968 - - - - - - - - - 0.968 BOK, BCL2 family apoptosis regulator [Source:NCBI gene;Acc:395445]
8. gga-mir-6544 ENSGALG00000027916 19 0.967 - - - - - - - - - 0.967 gga-mir-6544 [Source:miRBase;Acc:MI0022360]
9. TNFAIP3 ENSGALG00000013861 11 0.967 - - - - - - - - - 0.967 TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
10. C3orf58 ENSGALG00000002347 27 0.966 - - - - - - - - - 0.966 chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
11. NMBR ENSGALG00000013813 15 0.965 - - - - - - - - - 0.965 neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
12. TRMT61A ENSGALG00000011522 14 0.964 - - - - - - - - - 0.964 tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
13. ZMYND10 ENSGALG00000035883 58 0.963 - - - - - - - - - 0.963 zinc finger MYND-type containing 10 [Source:HGNC Symbol;Acc:HGNC:19412]
14. SMEK1 SMEK1 95 0.962 - - - - - - - - - 0.962
15. PKD2 ENSGALG00000010921 55 0.961 - - - - - - - - - 0.961 polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
16. TNN ENSGALG00000004538 21 0.957 - - - - - - - - - 0.957 tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
17. SLC7A2 ENSGALG00000013627 58 0.956 - - - - - - - - - 0.956 solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
18. TBX5 ENSGALG00000008253 820 0.956 - - - - - - - - - 0.956 T-box 5 [Source:NCBI gene;Acc:373988]
19. ZNF385B ENSGALG00000009012 290 0.956 - - - - - - - - - 0.956 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
20. CLIC3 ENSGALG00000038789 233 0.955 - - - - - - - - - 0.955 chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
21. TMEM200B ENSGALG00000024318 117 0.953 - - - - - - - - - 0.953 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
22. ERRFI1 ENSGALG00000000535 83 0.953 - - - - - - - - - 0.953 ERBB receptor feedback inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:18185]
23. GSS ENSGALG00000003281 57 0.952 - - - - - - - - - 0.952 glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
24. BMP2K ENSGALG00000010885 37 0.95 - - - - - - - - - 0.950 BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
25. TNFAIP2 ENSGALG00000011446 32 0.949 - - - - - - - - - 0.949 TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
26. KAT6B ENSGALG00000005035 301 0.949 - - - - - - - - - 0.949 lysine acetyltransferase 6B [Source:HGNC Symbol;Acc:HGNC:17582]
27. INADL INADL 51 0.947 - - - - - - - - - 0.947
28. SLC20A1 ENSGALG00000013740 40 0.945 - - - - - - - - - 0.945 solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
29. SENP7 ENSGALG00000044642 48 0.944 - - - - - - - - - 0.944 SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
30. PHF11 ENSGALG00000019094 770 0.944 - - - - - - - - - 0.944 PHD finger protein 11 [Source:HGNC Symbol;Acc:HGNC:17024]
31. SLC30A9 ENSGALG00000031415 36 0.941 - - - - - - - - - 0.941 solute carrier family 30 member 9
32. KCNB1 ENSGALG00000004758 620 0.94 - - - - - - - - - 0.940 potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
33. FAM154B FAM154B 175 0.938 - - - - - - - - - 0.938
34. PDE3A ENSGALG00000013143 28 0.938 - - - - - - - - - 0.938 phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
35. PXK ENSGALG00000007052 121 0.936 - - - - - - - - - 0.936 PX domain containing serine/threonine kinase like [Source:HGNC Symbol;Acc:HGNC:23326]
36. ROGDI ENSGALG00000001841 313 0.935 - - - - - - - - - 0.935 rogdi homolog [Source:HGNC Symbol;Acc:HGNC:29478]
37. OSBPL2 ENSGALG00000005195 94 0.932 - - - - - - - - - 0.932 oxysterol binding protein like 2 [Source:NCBI gene;Acc:419227]
38. NFAT5 ENSGALG00000039300 29 0.931 - - - - 0.931 - - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
39. LMBR1 ENSGALG00000030379 29 0.93 - - - - - - - - - 0.930 limb development membrane protein 1 [Source:NCBI gene;Acc:373986]
40. TRAF-5 TRAF-5 102 0.929 - - - - - - - - - 0.929
41. SRRD ENSGALG00000005614 234 0.927 - - - - - - - - - 0.927 SRR1 domain containing [Source:NCBI gene;Acc:416908]
42. KIF24 ENSGALG00000005806 124 0.924 - - - - - - - - - 0.924 kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]
43. KIAA0895 ENSGALG00000036301 280 0.924 - - - - - - - - - 0.924 KIAA0895 [Source:HGNC Symbol;Acc:HGNC:22206]
44. COQ2 ENSGALG00000041294 25 0.923 - - - - - - - - - 0.923 coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
45. GPRC6A ENSGALG00000014925 21 0.923 - - - - 0.923 - - - - - G protein-coupled receptor class C group 6 member A [Source:HGNC Symbol;Acc:HGNC:18510]
46. MYCN ENSGALG00000016462 1930 0.921 - - - - - - - - - 0.921 MYCN proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:421948]
47. BLOC1S2 ENSGALG00000005794 544 0.92 - - - - - - - - - 0.920 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
48. NAALAD2 202 0.915 - - - - - - - - - 0.915 N-acetylated alpha-linked acidic dipeptidase 2, transcript variant X1
49. ZEB2 ENSGALG00000040465 315 0.914 - - - - - - - - - 0.914 Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
50. SERAC1 ENSGALG00000013732 24 0.914 - - - - - - - - - 0.914 serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
51. SRR ENSGALG00000003155 93 0.91 - - - - - - - - - 0.910 serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
52. CREB5 ENSGALG00000038265 92 0.91 - - - - - - - - - 0.910 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
53. NME6 ENSGALG00000038044 1231 0.909 - - - - - - - - - 0.909 NME/NM23 nucleoside diphosphate kinase 6
54. MYH11 ENSGALG00000006520 166 0.903 - - - - - - - - - 0.903 myosin, heavy chain 11, smooth muscle [Source:NCBI gene;Acc:396211]
55. SMOC2 ENSGALG00000011205 340 0.901 - - - - - - - - - 0.901 SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
56. TMEM116 ENSGALG00000004760 217 0.9 - - - - - - - - - 0.900 transmembrane protein 116 [Source:HGNC Symbol;Acc:HGNC:25084]
57. CRAT ENSGALG00000037443 78 0.897 - - - - - - - - - 0.897 carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
58. TRAIP ENSGALG00000002908 6901 0.897 - - - - - - - - - 0.897 TRAF interacting protein [Source:NCBI gene;Acc:415927]
59. ITM2B ENSGALG00000016996 1112 0.897 - - - - - - - - - 0.897 integral membrane protein 2B [Source:NCBI gene;Acc:395969]
60. MATR3 ENSGALG00000002478 12793 0.895 - - - - - - - - - 0.895 matrin 3 [Source:NCBI gene;Acc:373948]
61. TPGS1 ENSGALG00000026780 688 0.895 - - - - - - - - - 0.895 tubulin polyglutamylase complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25058]
62. THAP9 ENSGALG00000044141 1993 0.894 - - - - - - - - - 0.894 THAP domain containing 9 [Source:HGNC Symbol;Acc:HGNC:23192]
63. HS1BP3 ENSGALG00000016486 380 0.892 - - - - - - - - - 0.892 HCLS1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24979]
64. ENDOV 121 0.892 - - - - - - - - - 0.892 endonuclease V
65. KCNB2 ENSGALG00000031693 31 0.89 - - - - - - - - - 0.890 potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
66. FRRS1L ENSGALG00000025792 1754 0.89 - - - - - - - - - 0.890 ferric chelate reductase 1 like [Source:HGNC Symbol;Acc:HGNC:1362]
67. NAPG ENSGALG00000013932 67 0.889 - - - - - - - - - 0.889 NSF attachment protein gamma [Source:HGNC Symbol;Acc:HGNC:7642]
68. RAD1 ENSGALG00000003365 1417 0.888 - - - - - - - - - 0.888 RAD1 checkpoint DNA exonuclease [Source:HGNC Symbol;Acc:HGNC:9806]
69. ALDH6A1 ENSGALG00000010211 29 0.886 - - - - - - - - - 0.886 aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
70. PTPRJ ENSGALG00000006382 891 0.884 - - - - - - - - - 0.884 protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
71. ATF2 ENSGALG00000009287 73 0.883 - - - - - - - - - 0.883 activating transcription factor 2 [Source:NCBI gene;Acc:395727]
72. FAM192A ENSGALG00000021473 10213 0.879 - - - - - - - - - 0.879 family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
73. NR5A2 ENSGALG00000002182 392 0.879 - - - - - - - - - 0.879 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
74. LEO1 ENSGALG00000004696 111 0.877 - - - - - - - - - 0.877 LEO1 homolog, Paf1/RNA polymerase II complex component [Source:NCBI gene;Acc:769405]
75. DMXL1 ENSGALG00000002227 88 0.874 - - - - - - - - - 0.874 Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
76. CPNE7 ENSGALG00000000507 54 0.872 - - - 0.872 - - - - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
77. CCDC67 CCDC67 3 0.869 - - - - 0.869 - - - - -
78. LETM2 ENSGALG00000036049 19 0.869 - - - - 0.869 - - - - - leucine zipper and EF-hand containing transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:14648]
79. ENSGALG00000028324 ENSGALG00000028324 1 0.869 - - - - 0.869 - - - - -
80. TPH2 ENSGALG00000010198 5 0.869 - - - - 0.869 - - - - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
81. FANCF ENSGALG00000003660 25 0.869 - - - - 0.869 - - - - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
82. AHR2 ENSGALG00000023742 21 0.869 - - - - 0.869 - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
83. RGS1 ENSGALG00000002549 1 0.869 - - - - 0.869 - - - - - regulator of G protein signaling 1 [Source:HGNC Symbol;Acc:HGNC:9991]
84. HOXD12 ENSGALG00000009274 637 0.869 - - - - 0.869 - - - - - homeobox D12 [Source:NCBI gene;Acc:396178]
85. ENSGALG00000024266 ENSGALG00000024266 5 0.869 - - - - 0.869 - - - - -
86. SLCO4C1 ENSGALG00000026768 30 0.869 - - - - 0.869 - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
87. GAB3 ENSGALG00000008408 19 0.869 - - - - 0.869 - - - - - GRB2 associated binding protein 3 [Source:HGNC Symbol;Acc:HGNC:17515]
88. ABLIM1 ENSGALG00000009048 19 0.869 - - - - 0.869 - - - - - actin binding LIM protein 1 [Source:NCBI gene;Acc:423911]
89. MPP3 ENSGALG00000042521 1372 0.869 - - - - - - - - - 0.869 membrane palmitoylated protein 3 [Source:HGNC Symbol;Acc:HGNC:7221]
90. U2_1 U2_1 13 0.869 - - - - 0.869 - - - - -
91. TUSC1 22 0.868 - - - - - - - - - 0.868 tumor suppressor candidate 1
92. GYPC ENSGALG00000011566 99 0.867 - - - - - - - - - 0.867 glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
93. MRM1 ENSGALG00000039523 2009 0.865 - - - - - - - - - 0.865 mitochondrial rRNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:26202]
94. MVP ENSGALG00000040471 1407 0.864 - - - - - - - - - 0.864 major vault protein [Source:NCBI gene;Acc:420049]
95. ENTPD5 ENSGALG00000010202 69 0.863 - - - - 0.863 - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
96. TRMT11 ENSGALG00000014831 305 0.86 - - - - - - - - - 0.860 tRNA methyltransferase 11 homolog [Source:NCBI gene;Acc:378793]
97. JMJD1C ENSGALG00000002942 4556 0.856 - - - - - - - - - 0.856 jumonji domain containing 1C [Source:NCBI gene;Acc:423655]
98. SBDS ENSGALG00000027989 112 0.856 - - - - - - - - - 0.856 SBDS, ribosome maturation factor [Source:NCBI gene;Acc:417477]
99. MFSD2B ENSGALG00000016498 208 0.852 - - - - - - - - - 0.852 major facilitator superfamily domain containing 2B [Source:HGNC Symbol;Acc:HGNC:37207]
100. EXOSC8 ENSGALG00000017048 2939 0.848 - - - - - - - - - 0.848 exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]

There are 181 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA