Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TLR4

Gene Name Gene ID Reads Annotation
TLR4 ENSGALG00000007001 116 toll like receptor 4 [Source:NCBI gene;Acc:417241]











Genes with expression patterns similar to TLR4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TLR4 ENSGALG00000007001 116 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 toll like receptor 4 [Source:NCBI gene;Acc:417241]
2. TMEM52B ENSGALG00000034698 169 1.68 - - - - - - - 0.857 - 0.823 transmembrane protein 52B [Source:HGNC Symbol;Acc:HGNC:26438]
3. MATN3 ENSGALG00000016478 10 1.614 - - - 0.746 - - 0.868 - - - matrilin 3 [Source:NCBI gene;Acc:395954]
4. KPNA5 ENSGALG00000014937 28 1.599 - - - - 0.745 - - 0.854 - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
5. VEPH1 ENSGALG00000009682 51 1.586 - - - - - - 0.868 0.718 - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
6. ASTL ENSGALG00000037220 2775 1.561 - - - - - 0.757 - - - 0.804 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
7. SMS ENSGALG00000016379 11607 1.544 - - - - - 0.783 - - - 0.761 spermine synthase [Source:NCBI gene;Acc:418602]
8. MILR1 ENSGALG00000046212 7 1.459 - - - 0.746 - 0.713 - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
9. UBE2L6 ENSGALG00000046098 393 1.438 - - - - - - 0.716 0.722 - - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
10. ADAM28 ENSGALG00000000357 57 1.432 - - - - - 0.713 - - 0.719 - ADAM metallopeptidase domain 28, transcript variant X2
11. SEPP1 SEPP1 35 0.958 - - - - - - - 0.958 - -
12. SENP7 ENSGALG00000044642 48 0.92 - - - - 0.920 - - - - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
13. CYP39A1 ENSGALG00000016710 16 0.92 - - - - 0.920 - - - - - cytochrome P450 family 39 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:17449]
14. LIPI ENSGALG00000015662 4 0.92 - - - - 0.920 - - - - - lipase member I, transcript variant X1
15. NSD1 ENSGALG00000002971 268 0.92 - - - - 0.920 - - - - - nuclear receptor binding SET domain protein 1 [Source:HGNC Symbol;Acc:HGNC:14234]
16. OTOL1 ENSGALG00000026305 14 0.914 - - - - 0.914 - - - - - otolin 1 [Source:HGNC Symbol;Acc:HGNC:34071]
17. BPIL ENSGALG00000021025 8 0.912 - - - - - - - 0.912 - - bactericidal permeability-increasing protein-like, transcript variant X2
18. TRIM13 ENSGALG00000017011 92 0.907 - - - - - - - 0.907 - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
19. SLC16A12 ENSGALG00000006421 4 0.907 - - - - - - - 0.907 - - solute carrier family 16 member 12 [Source:HGNC Symbol;Acc:HGNC:23094]
20. A4GNT ENSGALG00000006600 11 0.907 - - - - - - - 0.907 - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
21. MOGAT1 ENSGALG00000005217 12 0.907 - - - - - - - 0.907 - - monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
22. ATP8A2 ENSGALG00000017106 31 0.907 - - - - - - - 0.907 - - ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]
23. HINFP ENSGALG00000006806 15 0.907 - - - - - - - 0.907 - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
24. PLXNB1 23 0.907 - - - - - - - 0.907 - - plexin B1, transcript variant X2
25. LOC422224 ENSGALG00000005964 204 0.906 - - - - - - - 0.906 - - family with sequence similarity 162, member B, transcript variant X2
26. SPINK2 SPINK2 202 0.905 - - - - - - - 0.905 - -
27. FBLN7 ENSGALG00000046358 27 0.9 - - - - - - - 0.900 - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
28. BDH1B ENSGALG00000006976 9 0.9 - - - - 0.900 - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
29. INHBA ENSGALG00000034616 49 0.899 - - - - - - - 0.899 - - inhibin subunit beta A [Source:NCBI gene;Acc:396361]
30. ZDHHC2 42 0.898 - - - 0.898 - - - - - - zinc finger DHHC-type containing 2
31. FOXP2 ENSGALG00000009424 101 0.896 - - - - - - - 0.896 - - forkhead box P2 [Source:HGNC Symbol;Acc:HGNC:13875]
32. ATP6AP1L ENSGALG00000015618 476 0.895 - - - - - - - 0.895 - - ATPase H+ transporting accessory protein 1 like [Source:HGNC Symbol;Acc:HGNC:28091]
33. HTR1F ENSGALG00000015494 7 0.894 - - - - - - - 0.894 - - 5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]
34. GYS2 ENSGALG00000013265 14 0.894 - - - - - - - 0.894 - - glycogen synthase 2 [Source:HGNC Symbol;Acc:HGNC:4707]
35. NCLN ENSGALG00000013369 37 0.891 - - - - - - - 0.891 - - nicalin [Source:NCBI gene;Acc:426048]
36. TMEM170B ENSGALG00000012744 24 0.89 - - - - - 0.890 - - - - transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
37. TBX2 ENSGALG00000034297 57 0.886 - - - - - - - 0.886 - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
38. ENSGALG00000006389 ENSGALG00000006389 41 0.886 - - - - - - - 0.886 - -
39. CCP110 ENSGALG00000006925 59 0.885 - - - - - - - 0.885 - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
40. OSBP ENSGALG00000030548 439 0.884 - - - - - - 0.884 - - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
41. DINB1 DINB1 113 0.883 - - - - - - - - 0.883 -
42. CFAP206 ENSGALG00000015810 16 0.88 - - - - - - - 0.880 - - cilia and flagella associated protein 206, transcript variant X3
43. PODN ENSGALG00000021869 71 0.88 - - - - - - - 0.880 - - podocan [Source:HGNC Symbol;Acc:HGNC:23174]
44. KLF12 ENSGALG00000016926 197 0.878 - - - - - - - 0.878 - - Kruppel like factor 12 [Source:HGNC Symbol;Acc:HGNC:6346]
45. ATP10B ENSGALG00000001662 15 0.875 - - - - 0.875 - - - - - ATPase phospholipid transporting 10B (putative) [Source:HGNC Symbol;Acc:HGNC:13543]
46. MRAS ENSGALG00000011592 1264 0.874 - - - - - - - 0.874 - - muscle RAS oncogene homolog [Source:NCBI gene;Acc:395149]
47. TMEM117 ENSGALG00000009596 48 0.872 - - - - - - - 0.872 - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
48. CTBS ENSGALG00000008780 26 0.871 - - - - 0.871 - - - - - chitobiase [Source:HGNC Symbol;Acc:HGNC:2496]
49. SBSPONL ENSGALG00000005862 129 0.868 - - - - - - 0.868 - - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
50. ZDHHC18 ENSGALG00000034910 16 0.868 - - - - - - 0.868 - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
51. ENSGALG00000000346 ENSGALG00000000346 130 0.868 - - - - - - 0.868 - - -
52. CTNND1 ENSGALG00000007330 53 0.868 - - - - - - 0.868 - - - catenin delta 1 [Source:HGNC Symbol;Acc:HGNC:2515]
53. CYP2W1 ENSGALG00000021238, ENSGALG00000045037 2 0.868 - - - - - - 0.868 - - - cytochrome P450 family 2 subfamily W member 1, transcript variant X4
54. TGIF2 ENSGALG00000024081 21 0.868 - - - - - - 0.868 - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
55. PCID2 ENSGALG00000016831 57 0.868 - - - - - - 0.868 - - - PCI domain containing 2 [Source:NCBI gene;Acc:418745]
56. C21orf62 ENSGALG00000040059 5 0.868 - - - - - - 0.868 - - - chromosome 21 open reading frame 62 [Source:HGNC Symbol;Acc:HGNC:1305]
57. CYP17A1 ENSGALG00000008121 227 0.868 - - - - - - 0.868 - - - cytochrome P450 family 17 subfamily A member 1 [Source:NCBI gene;Acc:425056]
58. ENSGALG00000019156 ENSGALG00000019156 1 0.868 - - - - - - 0.868 - - -
59. RGR ENSGALG00000002299 17 0.868 - - - - - - 0.868 - - - retinal G protein coupled receptor [Source:NCBI gene;Acc:423619]
60. VSX2 ENSGALG00000033517 30 0.868 - - - - - - 0.868 - - - visual system homeobox 2 [Source:NCBI gene;Acc:395536]
61. TM6SF2 ENSGALG00000029015 109 0.868 - - - - - - 0.868 - - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
62. CEP85 ENSGALG00000042624 59 0.868 - - - - - - 0.868 - - - centrosomal protein 85 [Source:HGNC Symbol;Acc:HGNC:25309]
63. CLDN1 ENSGALG00000026862 28 0.868 - - - - - - 0.868 - - - claudin 1 [Source:NCBI gene;Acc:424910]
64. ENSGALG00000028038 ENSGALG00000028038 9 0.868 - - - - - - 0.868 - - -
65. CD72 ENSGALG00000005194 1 0.868 - - - - - - 0.868 - - - CD72 molecule [Source:NCBI gene;Acc:395923]
66. MPPED2 ENSGALG00000012136 7 0.868 - - - - - - 0.868 - - - metallophosphoesterase domain containing 2 [Source:NCBI gene;Acc:421604]
67. SRD5A2 ENSGALG00000010625 23 0.868 - - - - - - 0.868 - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
68. VSNL1 ENSGALG00000016464 19 0.868 - - - - - - 0.868 - - - visinin like 1 [Source:NCBI gene;Acc:396189]
69. DMP1 ENSGALG00000010927 5 0.868 - - - - - - 0.868 - - - matrix extracellular phosphoglycoprotein [Source:NCBI gene;Acc:395256]
70. SELP 28 0.868 - - - - - - 0.868 - - - selectin P, transcript variant X9
71. CUBN ENSGALG00000008704 21 0.868 - - - - - - 0.868 - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
72. MSL2 ENSGALG00000039294 55 0.868 - - - - - - 0.868 - - - MSL complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:25544]
73. CCDC148 ENSGALG00000012555 22 0.868 - - - - - - 0.868 - - - coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
74. MCMBP ENSGALG00000009455 90 0.868 - - - - - - 0.868 - - - minichromosome maintenance complex binding protein [Source:NCBI gene;Acc:423933]
75. PLCL1 ENSGALG00000008113 23 0.868 - - - - - - 0.868 - - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
76. ENSGALG00000019221 ENSGALG00000019221 9 0.868 - - - - - - 0.868 - - -
77. SMTNL1 12 0.868 - - - - - - 0.868 - - - smoothelin like 1
78. ENSGALG00000001138 ENSGALG00000001138 21 0.868 - - - - - - 0.868 - - -
79. CFAP74 ENSGALG00000001288 54 0.868 - - - - - - 0.868 - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
80. SYPL1 ENSGALG00000029006 126 0.868 - - - - - - 0.868 - - - synaptophysin like 1 [Source:NCBI gene;Acc:417708]
81. gga-mir-6558 ENSGALG00000032123 13 0.868 - - - - - - 0.868 - - - gga-mir-6558 [Source:miRBase;Acc:MI0022376]
82. FAM240B ENSGALG00000021163 6 0.868 - - - - - - 0.868 - - - family with sequence similarity 240 member B [Source:NCBI gene;Acc:427470]
83. BRPF3 8 0.868 - - - - - - 0.868 - - - bromodomain and PHD finger containing, 3, transcript variant X2
84. ENSGALG00000001478 ENSGALG00000001478 23 0.868 - - - - - - 0.868 - - -
85. TAT ENSGALG00000000893 11 0.868 - - - - - - 0.868 - - - tyrosine aminotransferase [Source:HGNC Symbol;Acc:HGNC:11573]
86. CACNG3 ENSGALG00000038087 12 0.868 - - - - - - 0.868 - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
87. TMCC1 ENSGALG00000008487 65 0.868 - - - - - - 0.868 - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
88. PIK3CG ENSGALG00000008081 5 0.868 - - - - - - 0.868 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
89. PACSIN1 ENSGALG00000002802 6 0.868 - - - - - - 0.868 - - - protein kinase C and casein kinase substrate in neurons 1 [Source:HGNC Symbol;Acc:HGNC:8570]
90. CTNNAL1 ENSGALG00000013207 44 0.868 - - - - - - 0.868 - - - catenin alpha like 1 [Source:HGNC Symbol;Acc:HGNC:2512]
91. PDE4DIP 277 0.865 - - - - - - - 0.865 - - phosphodiesterase 4D interacting protein
92. UNC13D ENSGALG00000002234 44 0.864 - - - - - - - 0.864 - - unc-13 homolog D [Source:HGNC Symbol;Acc:HGNC:23147]
93. NADK2 ENSGALG00000003558 79 0.86 - - - - - - - 0.860 - - NAD kinase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26404]
94. NKX1-1 ENSGALG00000035650 187 0.86 - - - - - - - 0.860 - - NK1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:24975]
95. C22orf39 ENSGALG00000044654 1364 0.859 - - - - - - - 0.859 - - chromosome 22 open reading frame 39 [Source:HGNC Symbol;Acc:HGNC:27012]
96. APLNR ENSGALG00000004841 176 0.858 - - - - - - - 0.858 - - apelin receptor [Source:HGNC Symbol;Acc:HGNC:339]
97. C6orf163 ENSGALG00000028653 39 0.856 - - - - 0.856 - - - - - chromosome 6 open reading frame 163 [Source:HGNC Symbol;Acc:HGNC:21403]
98. ENSGALG00000009041 ENSGALG00000009041 27 0.856 - - - - 0.856 - - - - -
99. GHDC ENSGALG00000003333 178 0.853 - - - - 0.853 - - - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
100. GP1BB ENSGALG00000021529 348 0.852 - - - - - - - - 0.852 - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]

There are 231 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA