Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for TLR3

Gene Name Gene ID Reads Annotation
TLR3 ENSGALG00000013468 35 toll like receptor 3 [Source:NCBI gene;Acc:422720]











Genes with expression patterns similar to TLR3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TLR3 ENSGALG00000013468 35 5 - - 1.000 - 1.000 1.000 1.000 1.000 - - toll like receptor 3 [Source:NCBI gene;Acc:422720]
2. LITAF ENSGALG00000003217 7 1.789 - - - - 0.789 - 1.000 - - - lipopolysaccharide induced TNF factor [Source:NCBI gene;Acc:374125]
3. ENSGALG00000015905 ENSGALG00000015905 5 1.673 - - - - 0.789 0.884 - - - -
4. ENSGALG00000028936 ENSGALG00000028936 57 1.658 - - - - - - 0.830 0.828 - -
5. PITPNM2 ENSGALG00000003645 17 1.557 - - - - - - 0.785 0.772 - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
6. SHROOM4 ENSGALG00000033953 3 1 - - - - - 1.000 - - - - shroom family member 4 [Source:HGNC Symbol;Acc:HGNC:29215]
7. ENSGALG00000016572 ENSGALG00000016572 79 1 - - - - - 1.000 - - - -
8. TBXAS1 ENSGALG00000012791 2 1 - - - - - 1.000 - - - - thromboxane A synthase 1 [Source:HGNC Symbol;Acc:HGNC:11609]
9. MTM1 ENSGALG00000009096 22 1 - - - - - 1.000 - - - - myotubularin 1 [Source:HGNC Symbol;Acc:HGNC:7448]
10. MREG ENSGALG00000003758 3 1 - - - - - 1.000 - - - - melanoregulin [Source:HGNC Symbol;Acc:HGNC:25478]
11. AMMECR1 ENSGALG00000008074 5 1 - - - - - 1.000 - - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
12. BLK ENSGALG00000016661 68 1 - - - - - 1.000 - - - - BLK proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1057]
13. ENSGALG00000027385 ENSGALG00000027385 1 1 - - - - - 1.000 - - - -
14. KCNV1 ENSGALG00000031449 64 1 - - - - - 1.000 - - - - potassium voltage-gated channel modifier subfamily V member 1
15. GNIH GNIH 8 1 - - - - - 1.000 - - - -
16. SAMD10 ENSGALG00000006007 15 1 - - - - - 1.000 - - - - sterile alpha motif domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16129]
17. WISP2 ENSGALG00000004154 4 1 - - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:HGNC Symbol;Acc:HGNC:12770]
18. MYOZ1 ENSGALG00000005226 1 1 - - - - - 1.000 - - - - myozenin 1 [Source:HGNC Symbol;Acc:HGNC:13752]
19. GPX2 ENSGALG00000042031 4 1 - - - - - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
20. DMC1 ENSGALG00000012236 1 1 - - - - - 1.000 - - - - DNA meiotic recombinase 1 [Source:HGNC Symbol;Acc:HGNC:2927]
21. ADCYAP1 ENSGALG00000014858 9 1 - - - - - 1.000 - - - - adenylate cyclase activating polypeptide 1 [Source:NCBI gene;Acc:408251]
22. UCP3 ENSGALG00000017316 30 1 - - - - - 1.000 - - - - uncoupling protein 3 [Source:NCBI gene;Acc:373896]
23. UIMC1 ENSGALG00000001158 22 0.995 - - - - - 0.995 - - - - ubiquitin interaction motif containing 1 [Source:HGNC Symbol;Acc:HGNC:30298]
24. BRINP3 ENSGALG00000033407 40 0.984 - - - - - 0.984 - - - - BMP/retinoic acid inducible neural specific 3 [Source:HGNC Symbol;Acc:HGNC:22393]
25. NFAT5 ENSGALG00000039300 29 0.98 - - - - - 0.980 - - - - nuclear factor of activated T-cells 5 [Source:NCBI gene;Acc:415866]
26. ATXN1L ENSGALG00000028253 17 0.951 - - - - - 0.951 - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
27. SIAH3 ENSGALG00000026849 384 0.944 - - - - - 0.944 - - - - siah E3 ubiquitin protein ligase family member 3 [Source:HGNC Symbol;Acc:HGNC:30553]
28. NUMBL ENSGALG00000016508 12 0.94 - - - - - 0.940 - - - - numb homolog (Drosophila)-like, transcript variant X2
29. SOBP ENSGALG00000043047 147 0.933 - - - - - 0.933 - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
30. MAPKAPK3 ENSGALG00000002283 30 0.933 - - - - - 0.933 - - - - Gallus gallus mitogen-activated protein kinase-activated protein kinase 3 (MAPKAPK3), mRNA. [Source:RefSeq mRNA;Acc:NM_001321558]
31. CNGA4 ENSGALG00000022704 4 0.931 - - - - - 0.931 - - - - cyclic nucleotide gated channel alpha 4 [Source:HGNC Symbol;Acc:HGNC:2152]
32. C12ORF32 C12ORF32 768 0.925 - - - - - 0.925 - - - -
33. TRAF3 ENSGALG00000011389 7 0.923 - - - - - 0.923 - - - - TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]
34. TRPA1 ENSGALG00000034751 148 0.92 - - - - - 0.920 - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
35. ENSGALG00000006152 ENSGALG00000006152 2 0.91 - - 0.910 - - - - - - -
36. TNFSF11 ENSGALG00000026163 26 0.91 - - 0.910 - - - - - - - TNF superfamily member 11 [Source:NCBI gene;Acc:428067]
37. EFHC2 ENSGALG00000016221 8 0.906 - - - - - 0.906 - - - - EF-hand domain containing 2 [Source:NCBI gene;Acc:418559]
38. DCHS1 ENSGALG00000017334 12 0.898 - - - - - 0.898 - - - - dachsous cadherin-related 1, transcript variant X1
39. ERC2 ENSGALG00000005419 24 0.898 - - - - - 0.898 - - - - ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]
40. PIFO ENSGALG00000023763 11 0.895 - - - - - - - 0.895 - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
41. CCDC148 ENSGALG00000012555 22 0.893 - - - - - 0.893 - - - - coiled-coil domain containing 148 [Source:HGNC Symbol;Acc:HGNC:25191]
42. TSPAN33 ENSGALG00000013528 832 0.886 - - - - - 0.886 - - - - tetraspanin 33, transcript variant X2
43. IQCH ENSGALG00000007909 128 0.882 - - - - - - - 0.882 - - IQ motif containing H [Source:HGNC Symbol;Acc:HGNC:25721]
44. PCTPL ENSGALG00000028681 1 0.879 - - - - - 0.879 - - - - PCTP-like protein-like
45. RELN ENSGALG00000008193 43 0.876 - - - - - 0.876 - - - - reelin [Source:NCBI gene;Acc:427850]
46. ENSGALG00000023879 ENSGALG00000023879 9 0.874 - - - - - 0.874 - - - -
47. SLC5A1 ENSGALG00000006728 36 0.869 - - - - - 0.869 - - - - solute carrier family 5 member 1 [Source:NCBI gene;Acc:395496]
48. C1S ENSGALG00000014603 80 0.869 - - - - - 0.869 - - - - complement C1s [Source:NCBI gene;Acc:418294]
49. ODZ1 ODZ1 124 0.856 - - - - - 0.856 - - - -
50. CUTA ENSGALG00000001620 76 0.854 - - - - - 0.854 - - - - cutA divalent cation tolerance homolog
51. PIKFYVE ENSGALG00000008842 3 0.854 - - 0.854 - - - - - - - phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
52. BF1 ENSGALG00000033932 18 0.854 - - - - - 0.854 - - - - MHC BF1 class I [Source:NCBI gene;Acc:693260]
53. PPAR PPAR 70 0.846 - - - - - 0.846 - - - -
54. KPNA5 ENSGALG00000014937 28 0.845 - - - - - - - 0.845 - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
55. NEK7 ENSGALG00000002216 4532 0.843 - - - - - 0.843 - - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
56. HINFP ENSGALG00000006806 15 0.842 - - - - - - - 0.842 - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
57. PLXNB1 23 0.842 - - - - - - - 0.842 - - plexin B1, transcript variant X2
58. ATP8A2 ENSGALG00000017106 31 0.842 - - - - - - - 0.842 - - ATPase phospholipid transporting 8A2 [Source:HGNC Symbol;Acc:HGNC:13533]
59. MOGAT1 ENSGALG00000005217 12 0.842 - - - - - - - 0.842 - - monoacylglycerol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:18210]
60. SLC16A12 ENSGALG00000006421 4 0.842 - - - - - - - 0.842 - - solute carrier family 16 member 12 [Source:HGNC Symbol;Acc:HGNC:23094]
61. A4GNT ENSGALG00000006600 11 0.842 - - - - - - - 0.842 - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
62. CERKL ENSGALG00000008910 70 0.84 - - - - - 0.840 - - - - ceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]
63. STOM ENSGALG00000001434 356 0.838 - - - - - 0.838 - - - - stomatin [Source:HGNC Symbol;Acc:HGNC:3383]
64. SLC35B4 ENSGALG00000038187 320 0.837 - - - - - 0.837 - - - - solute carrier family 35 member B4 [Source:HGNC Symbol;Acc:HGNC:20584]
65. CELSR1 ENSGALG00000043355 19 0.836 - - 0.836 - - - - - - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
66. FBLN7 ENSGALG00000046358 27 0.834 - - - - - - - 0.834 - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
67. INHBA ENSGALG00000034616 49 0.834 - - - - - - - 0.834 - - inhibin subunit beta A [Source:NCBI gene;Acc:396361]
68. C8orf34 ENSGALG00000034561 286 0.834 - - - - - - - 0.834 - - chromosome 8 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:30905]
69. BPIL ENSGALG00000021025 8 0.833 - - - - - - - 0.833 - - bactericidal permeability-increasing protein-like, transcript variant X2
70. FOXP2 ENSGALG00000009424 101 0.83 - - - - - - - 0.830 - - forkhead box P2 [Source:HGNC Symbol;Acc:HGNC:13875]
71. ATP13A3 ENSGALG00000007075 202 0.829 - - - - - - - 0.829 - - ATPase 13A3 [Source:HGNC Symbol;Acc:HGNC:24113]
72. HTR1F ENSGALG00000015494 7 0.828 - - - - - - - 0.828 - - 5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]
73. LOC422224 ENSGALG00000005964 204 0.827 - - - - - - - 0.827 - - family with sequence similarity 162, member B, transcript variant X2
74. YES1 ENSGALG00000014860 31 0.826 - - - - - 0.826 - - - - YES proto-oncogene 1, Src family tyrosine kinase [Source:NCBI gene;Acc:396238]
75. ATP6AP1L ENSGALG00000015618 476 0.825 - - - - - - - 0.825 - - ATPase H+ transporting accessory protein 1 like [Source:HGNC Symbol;Acc:HGNC:28091]
76. MIP-3ALPHA MIP-3ALPHA 14 0.82 - - - - - 0.820 - - - -
77. ENSGALG00000006389 ENSGALG00000006389 41 0.819 - - - - - - - 0.819 - -
78. CCP110 ENSGALG00000006925 59 0.818 - - - - - - - 0.818 - - centriolar coiled-coil protein 110 [Source:HGNC Symbol;Acc:HGNC:24342]
79. B4GALT4 ENSGALG00000015069 1315 0.816 - - - - - - - 0.816 - - beta-1,4-galactosyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:927]
80. C19orf44 C19orf44 24 0.815 - - - - - 0.815 - - - -
81. NCLN ENSGALG00000013369 37 0.815 - - - - - - - 0.815 - - nicalin [Source:NCBI gene;Acc:426048]
82. ARHGEF10L ENSGALG00000043128 171 0.815 - - - - - - - 0.815 - - Rho guanine nucleotide exchange factor 10 like [Source:HGNC Symbol;Acc:HGNC:25540]
83. CRAT ENSGALG00000037443 78 0.814 - - - - - 0.814 - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
84. KIAA1211 ENSGALG00000013771 135 0.814 - - - - - 0.814 - - - - KIAA1211 [Source:HGNC Symbol;Acc:HGNC:29219]
85. CFAP206 ENSGALG00000015810 16 0.813 - - - - - - - 0.813 - - cilia and flagella associated protein 206, transcript variant X3
86. CD101 12 0.811 - - - - - 0.811 - - - - CD101 molecule, transcript variant X4
87. FUCA2 ENSGALG00000013773 67 0.811 - - - - - - - 0.811 - - alpha-L-fucosidase 2 [Source:HGNC Symbol;Acc:HGNC:4008]
88. KLF12 ENSGALG00000016926 197 0.811 - - - - - - - 0.811 - - Kruppel like factor 12 [Source:HGNC Symbol;Acc:HGNC:6346]
89. TBX2 ENSGALG00000034297 57 0.81 - - - - - - - 0.810 - - T-box 2 [Source:HGNC Symbol;Acc:HGNC:11597]
90. C1orf109 ENSGALG00000045165 467 0.809 - - - - - 0.809 - - - - chromosome 1 open reading frame 109 [Source:HGNC Symbol;Acc:HGNC:26039]
91. SNORA27 SNORA27 36 0.809 - - - - - 0.809 - - - -
92. CPM ENSGALG00000009945 140 0.808 - - - - - - 0.808 - - - carboxypeptidase M [Source:NCBI gene;Acc:417843]
93. PTPRH PTPRH 66 0.808 - - - - - 0.808 - - - -
94. ZFAND3 ENSGALG00000010134 34 0.808 - - - - - 0.808 - - - - zinc finger AN1-type containing 3 [Source:HGNC Symbol;Acc:HGNC:18019]
95. HAGH ENSGALG00000005398 168 0.807 - - - - - 0.807 - - - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]
96. SS18L1 ENSGALG00000005145 14 0.806 - - - - - 0.806 - - - - SS18L1, nBAF chromatin remodeling complex subunit [Source:HGNC Symbol;Acc:HGNC:15592]
97. TNFSF10 ENSGALG00000009179 226 0.806 - - - - - 0.806 - - - - tumor necrosis factor superfamily member 10 [Source:NCBI gene;Acc:378894]
98. TMEM117 ENSGALG00000009596 48 0.805 - - - - - - - 0.805 - - transmembrane protein 117 [Source:HGNC Symbol;Acc:HGNC:25308]
99. PFN4 ENSGALG00000019866 53 0.803 - - - - - 0.803 - - - - profilin family member 4 [Source:HGNC Symbol;Acc:HGNC:31103]
100. FANCD2 ENSGALG00000003720 634 0.803 - - - - - - - 0.803 - - Fanconi anemia complementation group D2 [Source:NCBI gene;Acc:415935]

There are 191 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA