Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TKT

Gene Name Gene ID Reads Annotation
TKT ENSGALG00000005309 19801 transketolase [Source:HGNC Symbol;Acc:HGNC:11834]











Genes with expression patterns similar to TKT

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TKT ENSGALG00000005309 19801 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
2. KARS ENSGALG00000000907 51247 0.903 - - - - - - 0.903 - - - lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]
3. HNRNPR ENSGALG00000000814 32290 0.879 - - - - - - 0.879 - - - heterogeneous nuclear ribonucleoprotein R [Source:NCBI gene;Acc:419570]
4. PRPS1 ENSGALG00000004908 27994 0.878 - - - - - - 0.878 - - - phosphoribosyl pyrophosphate synthetase 1
5. GABPA ENSGALG00000015763 11567 0.872 - - - - - - 0.872 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
6. UBR7 ENSGALG00000010842 16488 0.868 - - - - - - 0.868 - - - Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
7. PSMA6 ENSGALG00000010060 26517 0.863 - - - - - - 0.863 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
8. CLTA ENSGALG00000015326 26867 0.86 - - - - - - 0.860 - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
9. PTBP1 ENSGALG00000001962 66983 0.859 - - - - - - 0.859 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
10. TP53BP2 ENSGALG00000042816 12368 0.857 - - - - - - 0.857 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
11. TALDO1 ENSGALG00000037195 30673 0.855 - - - - - - 0.855 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
12. ID2 ENSGALG00000035016 22120 0.854 - - - - - - 0.854 - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
13. HADH ENSGALG00000016124 18216 0.848 - - - - - - 0.848 - - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
14. AIRC AIRC 15851 0.845 - - - - - - 0.845 - - -
15. PSMC2 ENSGALG00000008236 25980 0.843 - - - - - - 0.843 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
16. SPTBN1 ENSGALG00000029512 18579 0.841 - - - - - - 0.841 - - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
17. MRPL44 ENSGALG00000003067 15256 0.84 - - - - - - 0.840 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
18. ENSGALG00000007509 ENSGALG00000007509 18441 0.834 - - - - - - 0.834 - - -
19. PRMT3 ENSGALG00000003958 14160 0.83 - - - - - - 0.830 - - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
20. CREPT CREPT 17142 0.829 - - - - - - 0.829 - - -
21. FBXO9 ENSGALG00000016320 9600 0.826 - - - - - - - 0.826 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
22. PEBP1 ENSGALG00000007403 77502 0.825 - - - - - - 0.825 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
23. SNORA72 SNORA72 27695 0.822 - - - - - - 0.822 - - -
24. ATP6V0B ENSGALG00000010091 14901 0.815 - - - - - - - 0.815 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
25. EIF3M ENSGALG00000012109 38661 0.813 - - - - - - 0.813 - - - eukaryotic translation initiation factor 3 subunit M [Source:NCBI gene;Acc:421602]
26. COPS4 ENSGALG00000011130 21515 0.813 - - - - - - 0.813 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
27. MGST1 ENSGALG00000013098 17632 0.812 - - - - - - 0.812 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
28. ACO2 ENSGALG00000011950 30387 0.811 - - - - - - 0.811 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
29. MRPL19 ENSGALG00000016731 22670 0.81 - - - - - - 0.810 - - - mitochondrial ribosomal protein L19, transcript variant X1
30. STX2 ENSGALG00000002536 10438 0.804 - - - - - - 0.804 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
31. COX7A2L ENSGALG00000037996 13646 0.803 - - - - - - 0.803 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
32. TCP1 ENSGALG00000011637 73216 0.802 - - - - - - 0.802 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
33. COPE ENSGALG00000003153 19444 0.802 - - - - - - 0.802 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
34. PEPD ENSGALG00000004899 9785 0.8 - - - - - - 0.800 - - - peptidase D [Source:NCBI gene;Acc:415776]
35. MED6 ENSGALG00000029743 9414 0.8 - - - - - - - 0.800 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
36. MYBL2 ENSGALG00000003503 15875 0.798 - - - - - - - 0.798 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
37. FAM96B 14435 0.797 - - - - - - 0.797 - - - family with sequence similarity 96 member B
38. GPX1 ENSGALG00000028204 62935 0.795 - - - - - - 0.795 - - - glutathione peroxidase 1 [Source:NCBI gene;Acc:100857115]
39. MINOS1 ENSGALG00000004039 37740 0.793 - - - - - - 0.793 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
40. GTF2E1 ENSGALG00000042320 7712 0.786 - - - - - - 0.786 - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
41. PSMB3 ENSGALG00000001597 22588 0.779 - - - - - - 0.779 - - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
42. ZNF367 ENSGALG00000012629 3215 0.779 - - - - - - - 0.779 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
43. FARP1 ENSGALG00000016886 13132 0.777 - - - - - - - 0.777 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
44. MAGOH 28688 0.776 - - - - - - 0.776 - - - mago homolog, exon junction complex core component
45. LAP3 ENSGALG00000006334 21076 0.776 - - - - - - 0.776 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
46. CRMP1B CRMP1B 18633 0.775 - - - - - - 0.775 - - -
47. HN1 HN1 34386 0.774 - - - - - - 0.774 - - -
48. ACAA2 ENSGALG00000031142 29220 0.771 - - - - - - 0.771 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
49. DHCR24 ENSGALG00000010798 3963 0.77 - - - - - - - 0.770 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
50. MAP4K3 ENSGALG00000039720 5124 0.767 - - - - - - - 0.767 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
51. ADH5 ENSGALG00000012245 38217 0.763 - - - - - - 0.763 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
52. RPS3A ENSGALG00000010077 292185 0.763 - - - - - - 0.763 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
53. CNOT7 ENSGALG00000013649 23435 0.761 - - - - - - 0.761 - - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
54. NDUFV2 ENSGALG00000036625 29234 0.756 - - - - - - - 0.756 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
55. RPL36AL ENSGALG00000004952 205590 0.756 - - - - - - 0.756 - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
56. TIMM23B ENSGALG00000002089 8122 0.756 - - - - - - - 0.756 - - translocase of inner mitochondrial membrane 23 homolog B
57. COX7C ENSGALG00000027963 84312 0.755 - - - - - - 0.755 - - - cytochrome c oxidase subunit 7C [Source:HGNC Symbol;Acc:HGNC:2292]
58. MCM6 ENSGALG00000012348 12523 0.754 - - - - - - - 0.754 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
59. KIF15 ENSGALG00000036645 9946 0.753 - - - - - - 0.753 - - - kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]
60. BTAF1 ENSGALG00000030598 3556 0.75 - - - - - - 0.750 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
61. PDE6D ENSGALG00000033062 20177 0.75 - - - - - - 0.750 - - - phosphodiesterase 6D [Source:HGNC Symbol;Acc:HGNC:8788]
62. STK4 ENSGALG00000004098 11366 0.749 - - - - - - 0.749 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
63. LARP1 ENSGALG00000040109 14808 0.749 - - - - - - 0.749 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
64. DYNC1LI1 ENSGALG00000011491 11011 0.749 - - - - - - 0.749 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
65. TRAM1 ENSGALG00000041112 22876 0.746 - - - - - - 0.746 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
66. HSPA12A ENSGALG00000009248 7783 0.744 - - - - - - - 0.744 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
67. RPL12 ENSGALG00000008806 229862 0.738 - - - - - - 0.738 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
68. PRPF8 ENSGALG00000002943 31189 0.736 - - - - - - 0.736 - - - pre-mRNA processing factor 8 [Source:HGNC Symbol;Acc:HGNC:17340]
69. USP42 ENSGALG00000003378 1392 0.735 - - - - - - - 0.735 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
70. GNA12 ENSGALG00000004368 692 0.735 - - - - - - - 0.735 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
71. STAMBP ENSGALG00000042555 1362 0.735 - - - - - - - 0.735 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
72. TMEM69 ENSGALG00000010279 716 0.735 - - - - - - - 0.735 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
73. TDRD1 ENSGALG00000046180 612 0.735 - - - - - - - 0.735 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
74. CREB1 ENSGALG00000008494 2219 0.735 - - - - - - - 0.735 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
75. ENSGALG00000028413 ENSGALG00000028413 551 0.735 - - - - - - - 0.735 - -
76. USP30 ENSGALG00000040265 2000 0.735 - - - - - - - 0.735 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
77. VEGFC ENSGALG00000010847 2197 0.735 - - - - - - - 0.735 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
78. PRRX2 ENSGALG00000028236 1990 0.735 - - - - - - - 0.735 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
79. SIN3A ENSGALG00000001644 1141 0.734 - - - - - - - 0.734 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
80. SLC52A3 ENSGALG00000006194 3952 0.734 - - - - - - - 0.734 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
81. RRBP1 ENSGALG00000008676 5376 0.734 - - - - - - - 0.734 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
82. SLBP ENSGALG00000015712 5586 0.734 - - - - - - - 0.734 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
83. CTU2 4818 0.734 - - - - - - - 0.734 - - cytosolic thiouridylase subunit 2, transcript variant X3
84. TNFRSF21 ENSGALG00000016719 2762 0.734 - - - - - - - 0.734 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
85. C9orf89 C9orf89 3056 0.734 - - - - - - - 0.734 - -
86. ENSGALG00000026041 ENSGALG00000026041 13390 0.734 - - - - - - 0.734 - - -
87. ZNF462 ENSGALG00000015451 12653 0.734 - - - - - - - 0.734 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
88. PHAX ENSGALG00000014691 8114 0.733 - - - - - - - 0.733 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
89. VPS36 ENSGALG00000017026 3658 0.733 - - - - - - - 0.733 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
90. PPAT ENSGALG00000013728 7563 0.733 - - - - - - - 0.733 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
91. PPIB ENSGALG00000002210 46778 0.732 - - - - - - 0.732 - - - peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
92. ADAR ENSGALG00000021475 6004 0.732 - - - - - - - 0.732 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
93. RPL7L1 ENSGALG00000011974 20292 0.731 - - - - - - - 0.731 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
94. PTK7 ENSGALG00000008609 8081 0.731 - - - - - - - 0.731 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
95. CWC22 ENSGALG00000009001 5984 0.731 - - - - - - - 0.731 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
96. SFT2D1 ENSGALG00000020005 10855 0.73 - - - - - - 0.730 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
97. INTS2 ENSGALG00000005269 6966 0.73 - - - - - - - 0.730 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
98. PDCD6 ENSGALG00000013400 7611 0.729 - - - - - - - 0.729 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
99. FAT1 ENSGALG00000013579 6030 0.729 - - - - - - - 0.729 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
100. GCLM ENSGALG00000005782 15789 0.729 - - - - - - 0.729 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]

There are 31 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA