Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TIMP3_1

Gene Name Gene ID Reads Annotation
TIMP3_1 ENSGALG00000028627 24 TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]











Genes with expression patterns similar to TIMP3_1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TIMP3_1 ENSGALG00000028627 24 4 - - 1.000 - 1.000 1.000 - - - 1.000 TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
2. DCAKD ENSGALG00000000870 4 2 - - - - 1.000 - - - - 1.000 dephospho-CoA kinase domain containing [Source:HGNC Symbol;Acc:HGNC:26238]
3. ENSGALG00000000407 ENSGALG00000000407 32 1 - - - - - - - - - 1.000
4. LASP1 ENSGALG00000039299 138 1 - - - - 1.000 - - - - - LIM and SH3 protein 1 [Source:NCBI gene;Acc:420002]
5. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - - - - - - - 1.000
6. COG3 ENSGALG00000016980 15 1 - - - - 1.000 - - - - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
7. ENSGALG00000028778 ENSGALG00000028778 47 1 - - - - - - - - - 1.000
8. GBX2 ENSGALG00000013342 5 1 - - - - - - - - - 1.000 gastrulation brain homeobox 2 [Source:NCBI gene;Acc:395950]
9. MDGA1 ENSGALG00000010145 13 1 - - - - 1.000 - - - - - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:NCBI gene;Acc:421431]
10. DOCK3 ENSGALG00000002335 5 1 - - - - - - - - - 1.000 dedicator of cytokinesis 3 [Source:HGNC Symbol;Acc:HGNC:2989]
11. ATP10B ENSGALG00000001662 15 1 - - - - - - - - - 1.000 ATPase phospholipid transporting 10B (putative) [Source:HGNC Symbol;Acc:HGNC:13543]
12. EVI2A ENSGALG00000039084 13 1 - - - - - - - - - 1.000 ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
13. MYOM1 ENSGALG00000014847 105 1 - - - - 1.000 - - - - - myomesin 1 [Source:NCBI gene;Acc:395805]
14. CCSER1 ENSGALG00000039674 14 1 - - - - 1.000 - - - - - coiled-coil serine rich protein 1, transcript variant X3
15. TMPRSS5 1 1 - - - - 1.000 - - - - - transmembrane protease, serine 5, transcript variant X6
16. ENSGALG00000028479 ENSGALG00000028479 5 1 - - - - - - - - - 1.000
17. NMBR ENSGALG00000013813 15 1 - - - - 1.000 - - - - - neuromedin B receptor [Source:HGNC Symbol;Acc:HGNC:7843]
18. KIAA1217 ENSGALG00000007766 144 1 - - - - 1.000 - - - - - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
19. UTS2RL ENSGALG00000012419 118 1 - - - - 1.000 - - - - - urotensin-2 receptor-like
20. PCGF5 ENSGALG00000006502 2 1 - - - - - - - - - 1.000 polycomb group ring finger 5 [Source:NCBI gene;Acc:423796]
21. RAD21L1 ENSGALG00000006186 2 1 - - - - - - - - - 1.000 RAD21 cohesin complex component like 1 [Source:HGNC Symbol;Acc:HGNC:16271]
22. MGAT5B ENSGALG00000001740 2 1 - - - - - - - - - 1.000 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:24140]
23. DES ENSGALG00000011306 16 1 - - - - 1.000 - - - - - desmin [Source:HGNC Symbol;Acc:HGNC:2770]
24. CNTFR ENSGALG00000028140 2 1 - - - - 1.000 - - - - - ciliary neurotrophic factor receptor [Source:NCBI gene;Acc:395885]
25. FAM198A ENSGALG00000037533 7 1 - - - - - - - - - 1.000 family with sequence similarity 198 member A [Source:HGNC Symbol;Acc:HGNC:24485]
26. ABCC5 ENSGALG00000008369 1 1 - - - - - - - - - 1.000 ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]
27. CSF1R ENSGALG00000005725 5 1 - - - - 1.000 - - - - - Gallus gallus colony stimulating factor 1 receptor (CSF1R), mRNA. [Source:RefSeq mRNA;Acc:NM_001321517]
28. GRIN1 ENSGALG00000008898 18 1 - - - - - - - - - 1.000 glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
29. PRKCZ ENSGALG00000001270 12 1 - - - - 1.000 - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
30. CSGALNACT1 ENSGALG00000010125 5 1 - - - - - - - - - 1.000 chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]
31. CLIC5 ENSGALG00000016707 1 1 - - - - 1.000 - - - - - chloride intracellular channel 5 [Source:HGNC Symbol;Acc:HGNC:13517]
32. SAMD12 ENSGALG00000029664 20 1 - - - - 1.000 - - - - - sterile alpha motif domain containing 12 [Source:HGNC Symbol;Acc:HGNC:31750]
33. SLC1A7 ENSGALG00000010673 1 1 - - - - - - - - - 1.000 solute carrier family 1 member 7 [Source:HGNC Symbol;Acc:HGNC:10945]
34. FOXN4 ENSGALG00000005062 7 1 - - - - - - - - - 1.000 forkhead box N4 [Source:NCBI gene;Acc:416898]
35. ADRA2C ENSGALG00000015608 42 1 - - - - - - - - - 1.000 adrenoceptor alpha 2C [Source:HGNC Symbol;Acc:HGNC:283]
36. SNORA33 SNORA33 11 1 - - - - 1.000 - - - - -
37. AOAH ENSGALG00000035505 6 1 - - - - 1.000 - - - - - acyloxyacyl hydrolase [Source:HGNC Symbol;Acc:HGNC:548]
38. C19orf44 C19orf44 24 1 - - - - - - - - - 1.000
39. CNST ENSGALG00000010649 18 1 - - - - 1.000 - - - - - consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
40. RNF217 ENSGALG00000013651 1 1 - - - - - - - - - 1.000 ring finger protein 217 [Source:HGNC Symbol;Acc:HGNC:21487]
41. SLC24A3 ENSGALG00000008445 8 0.963 - - - - - - - - - 0.963 solute carrier family 24 member 3 [Source:HGNC Symbol;Acc:HGNC:10977]
42. VSX2 ENSGALG00000033517 30 0.956 - - - - - - - - - 0.956 visual system homeobox 2 [Source:NCBI gene;Acc:395536]
43. LOC101747660 ENSGALG00000027822 4 0.94 - - - - - 0.940 - - - - uncharacterized LOC101747660
44. ADORA1 ENSGALG00000000168 43 0.94 - - - - - 0.940 - - - - adenosine A1 receptor [Source:NCBI gene;Acc:374212]
45. ENSGALG00000026756 ENSGALG00000026756 134 0.939 - - - - - - - - - 0.939
46. CLOCK ENSGALG00000013793 9 0.932 - - - - 0.932 - - - - - clock circadian regulator [Source:NCBI gene;Acc:373991]
47. STARD8 ENSGALG00000032419 1 0.93 - - - - - - - - - 0.930 StAR related lipid transfer domain containing 8 [Source:HGNC Symbol;Acc:HGNC:19161]
48. STAB1 21 0.917 - - - - - - - - - 0.917 stabilin 1, transcript variant X2
49. LCOR ENSGALG00000028512 30 0.898 - - - - - 0.898 - - - - ligand dependent nuclear receptor corepressor, transcript variant X16
50. RC3H2 ENSGALG00000001253 18 0.876 - - - - - - - - - 0.876 ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
51. ENSGALG00000004630 ENSGALG00000004630 1 0.876 - - - - - - - - - 0.876
52. NKAIN1 ENSGALG00000000604 4 0.871 - - - - - - - - - 0.871 sodium/potassium transporting ATPase interacting 1, transcript variant X2
53. BPIL ENSGALG00000021025 8 0.866 - - - - - - - - - 0.866 bactericidal permeability-increasing protein-like, transcript variant X2
54. TESK2 ENSGALG00000010230 9 0.866 - - - - - - - - - 0.866 testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
55. PIFO ENSGALG00000023763 11 0.863 - - - - 0.863 - - - - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
56. ATP9B 33 0.853 - - - - - - - - - 0.853 ATPase phospholipid transporting 9B (putative), transcript variant X2
57. PXDNL ENSGALG00000036838 548 0.851 - - - - - - - - - 0.851 peroxidasin like, transcript variant X1
58. UBA2 ENSGALG00000005006 243 0.835 - - - - 0.835 - - - - - ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
59. FSHR ENSGALG00000009100 18 0.831 - - - - - - - - - 0.831 follicle stimulating hormone receptor [Source:NCBI gene;Acc:395962]
60. CHRNA10 ENSGALG00000022702 7 0.819 - - - - - - - - - 0.819 cholinergic receptor, nicotinic, alpha 10 (neuronal) [Source:NCBI gene;Acc:430628]
61. SNCB ENSGALG00000021542 19 0.815 - - - - - - - - - 0.815 synuclein beta [Source:NCBI gene;Acc:395391]
62. VSX1 ENSGALG00000037576 1517 0.808 - - - - - - - - - 0.808 visual system homeobox 1 [Source:NCBI gene;Acc:395537]
63. GJB6 ENSGALG00000017136 500 0.807 - - - - - 0.807 - - - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
64. ABHD3 ENSGALG00000014938 9 0.805 - - - - 0.805 - - - - - abhydrolase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18718]
65. SERPING1 ENSGALG00000007381 144 0.796 - - - - - - - - - 0.796 serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]
66. NUDT2 ENSGALG00000027295 15 0.796 - - - - - - - - - 0.796 nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
67. EAF1 ENSGALG00000033379 3 0.796 - - - - - - - - - 0.796 ELL associated factor 1 [Source:HGNC Symbol;Acc:HGNC:20907]
68. MPV17L2 ENSGALG00000041429 168 0.794 - - - - - - - - - 0.794 MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
69. SLC22A13 ENSGALG00000005934 8 0.794 - - - - 0.794 - - - - - solute carrier family 22 member 13
70. TRAF6 ENSGALG00000007932 12 0.794 - - - - 0.794 - - - - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
71. SNORA65 SNORA65 9 0.791 - - - - - - - - - 0.791
72. TRPC3 ENSGALG00000011875 9 0.789 - - - - 0.789 - - - - - transient receptor potential cation channel subfamily C member 3 [Source:NCBI gene;Acc:374153]
73. GLRA3 ENSGALG00000010781 4 0.789 - - - - 0.789 - - - - - glycine receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4328]
74. FOXP4 ENSGALG00000033497 13 0.789 - - - - - - - - - 0.789 forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
75. IL1RAP ENSGALG00000007253 6 0.784 - - - - 0.784 - - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
76. ARNTL ENSGALG00000005378 19 0.784 - - - - 0.784 - - - - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
77. ALG12 ENSGALG00000008539 20 0.779 - - - - - - - - - 0.779 ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
78. DCLK3 ENSGALG00000034493 50 0.779 - - - - 0.779 - - - - - doublecortin like kinase 3 [Source:HGNC Symbol;Acc:HGNC:19005]
79. ZDHHC18 ENSGALG00000034910 16 0.763 - - - - 0.763 - - - - - zinc finger, DHHC-type containing 18 [Source:NCBI gene;Acc:419575]
80. PROCR ENSGALG00000006547 645 0.753 - - - - 0.753 - - - - - protein C receptor [Source:NCBI gene;Acc:424867]
81. RNF146 ENSGALG00000026820 11 0.751 - - - - - - - - - 0.751 ring finger protein 146 [Source:HGNC Symbol;Acc:HGNC:21336]
82. ENSGALG00000006740 ENSGALG00000006740 30 0.751 - - - - - - - - - 0.751
83. MYRF ENSGALG00000041253 13 0.748 - - - - - - - - - 0.748 myelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]
84. NOS2 ENSGALG00000038096 7 0.741 - - - - - - - - - 0.741 nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
85. ACAN ENSGALG00000006725 184 0.739 - - - - 0.739 - - - - - aggrecan [Source:NCBI gene;Acc:395798]
86. FSTL4 ENSGALG00000031487 529 0.737 - - - - 0.737 - - - - - follistatin like 4 [Source:NCBI gene;Acc:395163]
87. ZBTB21 ENSGALG00000016147 13 0.737 - - - - - - - - - 0.737 zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
88. TERT ENSGALG00000013183 251 0.732 - - - - - - - - - 0.732 telomerase reverse transcriptase [Source:NCBI gene;Acc:420972]
89. FAM240B ENSGALG00000021163 6 0.727 - - - - - - - - - 0.727 family with sequence similarity 240 member B [Source:NCBI gene;Acc:427470]
90. CELF5 ENSGALG00000026716 2 0.725 - - - - - 0.725 - - - - CUGBP Elav-like family member 5 [Source:HGNC Symbol;Acc:HGNC:14058]
91. GPRC6A ENSGALG00000014925 21 0.725 - - - - 0.725 - - - - - G protein-coupled receptor class C group 6 member A [Source:HGNC Symbol;Acc:HGNC:18510]
92. RASA1 ENSGALG00000017706 224 0.722 - - - - - 0.722 - - - - RAS p21 protein activator 1
93. TPCN1 ENSGALG00000008357 28 0.719 - - - - - - - - - 0.719 two pore segment channel 1 [Source:HGNC Symbol;Acc:HGNC:18182]
94. ENSGALG00000014946 ENSGALG00000014946 40 0.712 - - - - 0.712 - - - - -
95. CCDC30 15 0.703 - - - - - - - - - 0.703 coiled-coil domain containing 30, transcript variant X4
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA