Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TGFB3

Gene Name Gene ID Reads Annotation
TGFB3 ENSGALG00000010346 3118 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]











Genes with expression patterns similar to TGFB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TGFB3 ENSGALG00000010346 3118 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
2. WBP1L ENSGALG00000041010 3681 1.474 - - - - - - 0.761 - - 0.713 WW domain binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:23510]
3. TFG ENSGALG00000015299 849 0.959 - - - - - - - - - 0.959 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
4. BCOR ENSGALG00000016245 85 0.959 - - - - - - - - - 0.959 BCL6 corepressor, transcript variant X8
5. GRPEL2 ENSGALG00000002673 105 0.958 - - - - - - - - - 0.958 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
6. SOS2 ENSGALG00000012273 41 0.958 - - - - - - - - - 0.958 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
7. RP9 ENSGALG00000035453 1186 0.958 - - - - - - - - - 0.958 retinitis pigmentosa 9 (autosomal dominant)
8. FOXP1 127 0.957 - - - - - - - - - 0.957 forkhead box P1, transcript variant X14
9. CNKSR3 ENSGALG00000027159 41 0.957 - - - - - - - - - 0.957 CNKSR family member 3, transcript variant X2
10. RPRD2 ENSGALG00000014656 939 0.956 - - - - - - - - - 0.956 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
11. ENSGALG00000008594 ENSGALG00000008594 54 0.956 - - - - - - - - - 0.956
12. TM6SF2 ENSGALG00000029015 109 0.955 - - - - - - - - - 0.955 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
13. ATP2B2 ENSGALG00000030908 584 0.955 - - - - - - - - - 0.955 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
14. UBE3C ENSGALG00000006461 57 0.955 - - - - - - - - - 0.955 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
15. MAP3K8 ENSGALG00000007356 188 0.954 - - - - - - - - - 0.954 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
16. TRIP4 ENSGALG00000030672 1255 0.954 - - - - - - - - - 0.954 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
17. ENSGALG00000027621 ENSGALG00000027621 863 0.953 - - - - - - - - - 0.953
18. SLC38A1 ENSGALG00000009698 566 0.953 - - - - - - - - - 0.953 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
19. PDCD4 ENSGALG00000008700 574 0.953 - - - - - - - - - 0.953 programmed cell death 4 [Source:NCBI gene;Acc:374191]
20. SERPINB6 ENSGALG00000012866 1582 0.953 - - - - - - - - - 0.953 serpin family B member 6 [Source:NCBI gene;Acc:420895]
21. ENSGALG00000018358 ENSGALG00000018358 101 0.953 - - - - - - - - - 0.953
22. AGMO ENSGALG00000010792 76 0.953 - - - - - - - - - 0.953 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
23. ADAMTS12 55 0.953 - - - - - - - - - 0.953 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
24. SUPV3L1 ENSGALG00000004197 4141 0.952 - - - - - - - - - 0.952 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
25. C5orf24 ENSGALG00000006371 1573 0.952 - - - - - - - - - 0.952 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
26. EEA1 ENSGALG00000011280 923 0.952 - - - - - - - - - 0.952 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
27. MAP3K3 ENSGALG00000000525 115 0.951 - - - - - - - - - 0.951 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
28. STX6 3297 0.951 - - - - - - - - - 0.951 syntaxin 6
29. PRICKLE1 ENSGALG00000009556 60 0.951 - - - - - - - - - 0.951 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
30. PTPRE ENSGALG00000009823 250 0.951 - - - - - - - - - 0.951 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
31. DTX2 ENSGALG00000001905 1475 0.951 - - - - - - - - - 0.951 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
32. TYSND1 ENSGALG00000033807 716 0.95 - - - - - - - - - 0.950 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
33. TTI1 ENSGALG00000006791 1218 0.95 - - - - - - - - - 0.950 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
34. ENSGALG00000004772 ENSGALG00000004772 173 0.95 - - - - - - - - - 0.950
35. PROCR ENSGALG00000006547 645 0.95 - - - - - - - - - 0.950 protein C receptor [Source:NCBI gene;Acc:424867]
36. SHPK ENSGALG00000004637 2386 0.95 - - - - - - - - - 0.950 sedoheptulokinase, transcript variant X1
37. GPR114 GPR114 46 0.949 - - - - - - - - - 0.949
38. DUSP23 1663 0.949 - - - - - - - - - 0.949 dual specificity phosphatase 23, transcript variant X1
39. RGP1 ENSGALG00000002394 5937 0.949 - - - - - - - - - 0.949 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
40. IFNAR2 ENSGALG00000041867 1596 0.947 - - - - - - - - - 0.947 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
41. PRR11 2624 0.947 - - - - - - - - - 0.947 proline rich 11, transcript variant X8
42. CTK-1 CTK-1 1618 0.947 - - - - - - - - - 0.947
43. CCBL2 CCBL2 184 0.945 - - - - - - - - - 0.945
44. ELL2 ENSGALG00000014678 1111 0.945 - - - - - - - - - 0.945 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
45. ZFPM2 ENSGALG00000040079 942 0.944 - - - - - - - - - 0.944 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
46. VAV2 ENSGALG00000002699 503 0.943 - - - - - - - - - 0.943 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
47. TRIM24 ENSGALG00000012823 2725 0.942 - - - - - - - - - 0.942 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
48. FBXL2 ENSGALG00000030175 157 0.942 - - - - - - - - - 0.942 F-box and leucine rich repeat protein 2 [Source:HGNC Symbol;Acc:HGNC:13598]
49. CENPJ ENSGALG00000017148 1415 0.942 - - - - - - - - - 0.942 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
50. TRIM3 ENSGALG00000034004 110 0.942 - - - - - - - - - 0.942 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
51. RPGR ENSGALG00000036284 186 0.942 - - - - - - - - - 0.942 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
52. ENSGALG00000004643 ENSGALG00000004643 2297 0.941 - - - - - - - - - 0.941
53. TRMT44 ENSGALG00000015594 1490 0.941 - - - - - - - - - 0.941 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
54. NHLRC2 ENSGALG00000008946 387 0.94 - - - - - - - - - 0.940 NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
55. EP3 EP3 741 0.94 - - - - - - - - - 0.940
56. NBN ENSGALG00000037686 648 0.939 - - - - - - - - - 0.939 nibrin [Source:NCBI gene;Acc:374246]
57. CEP57 ENSGALG00000017201 524 0.938 - - - - - - - - - 0.938 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
58. LUZP1 ENSGALG00000025858 947 0.938 - - - - - - - - - 0.938 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
59. ENSGALG00000001919 ENSGALG00000001919 531 0.937 - - - - - - - - - 0.937
60. CEP55 ENSGALG00000006639 258 0.935 - - - - - - - - - 0.935 centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]
61. ZNF142 ENSGALG00000011393 2078 0.935 - - - - - - - - - 0.935 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
62. SLC15A4 ENSGALG00000002695 2729 0.935 - - - - - - - - - 0.935 solute carrier family 15 member 4 [Source:HGNC Symbol;Acc:HGNC:23090]
63. NFKBIE ENSGALG00000044525 633 0.935 - - - - - - - - - 0.935 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
64. PDCD7 ENSGALG00000021027 3807 0.935 - - - - - - - - - 0.935 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
65. MITF ENSGALG00000039583 865 0.933 - - - - - - - - - 0.933 melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
66. TMEM199 ENSGALG00000023757 10781 0.932 - - - - - - - - - 0.932 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
67. PERP PERP 734 0.931 - - - - - - - - - 0.931
68. CKI CKI 2845 0.931 - - - - - - - - - 0.931
69. MASP1 ENSGALG00000007419 141 0.931 - - - - - - - - - 0.931 mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
70. FN3K ENSGALG00000001531 208 0.93 - - - - - - - - - 0.930 fructosamine 3 kinase [Source:HGNC Symbol;Acc:HGNC:24822]
71. COL12A1 ENSGALG00000015908 1300 0.93 - - - - - - - - - 0.930 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
72. MRPS5 ENSGALG00000008550 1707 0.929 - - - - - - - - - 0.929 mitochondrial ribosomal protein S5 [Source:NCBI gene;Acc:416706]
73. SOSTDC1 ENSGALG00000036836 1081 0.928 - - - - - - - - - 0.928 sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
74. RASSF8 ENSGALG00000014041 850 0.927 - - - - - - - - - 0.927 Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
75. CAPN15 ENSGALG00000002018 3353 0.926 - - - - - - - - - 0.926 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
76. CREG2 ENSGALG00000040947 1279 0.926 - - - - - - - - - 0.926 cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]
77. PIGW ENSGALG00000023554 951 0.925 - - - - - - - - - 0.925 phosphatidylinositol glycan anchor biosynthesis class W [Source:HGNC Symbol;Acc:HGNC:23213]
78. PMVK ENSGALG00000046656 645 0.924 - - - - - - - - - 0.924 phosphomevalonate kinase [Source:HGNC Symbol;Acc:HGNC:9141]
79. ANGEL1 ENSGALG00000010372 1763 0.924 - - - - - - - - - 0.924 angel homolog 1 [Source:NCBI gene;Acc:423370]
80. SRA1 ENSGALG00000040453 266 0.923 - - - - - - - - - 0.923 steroid receptor RNA activator 1 [Source:NCBI gene;Acc:427608]
81. USP36 ENSGALG00000037018 783 0.923 - - - - - - - - - 0.923 ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]
82. INTS8 ENSGALG00000037955 3349 0.923 - - - - - - - - - 0.923 integrator complex subunit 8 [Source:NCBI gene;Acc:420230]
83. FAM83D ENSGALG00000039047, ENSGALG00000044404 297 0.922 - - - - - - - - - 0.922 family with sequence similarity 83, member D
84. RFWD3 2315 0.922 - - - - - - - - - 0.922 ring finger and WD repeat domain 3
85. RAB34 ENSGALG00000026315 1193 0.921 - - - - - - - - - 0.921 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
86. PRKAB2 ENSGALG00000001678 1999 0.921 - - - - - - - - - 0.921 protein kinase AMP-activated non-catalytic subunit beta 2 [Source:NCBI gene;Acc:427017]
87. PLXNA4 ENSGALG00000006473 125 0.92 - - - - - - - - - 0.920 plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
88. DGKB ENSGALG00000033561 170 0.92 - - - - - - - - - 0.920 diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
89. FTSJ3 ENSGALG00000032993 8929 0.92 - - - - - - - - - 0.920 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
90. CTCF 10811 0.919 - - - - - - - - - 0.919 CCCTC-binding factor, transcript variant X2
91. TNFRSF21 ENSGALG00000016719 2762 0.919 - - - - - - - - - 0.919 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
92. AHSA2 1504 0.919 - - - - - - - - - 0.919 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
93. PCMTD2 ENSGALG00000005901 1833 0.918 - - - - - - - - - 0.918 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
94. MCFD2 ENSGALG00000010017 8905 0.918 - - - - - - - - - 0.918 multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
95. OBFC1 OBFC1 1071 0.918 - - - - - - - - - 0.918
96. VOPP1 ENSGALG00000042773 771 0.917 - - - - - - - - - 0.917 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
97. TWF2 ENSGALG00000003977 6597 0.916 - - - - - - - - - 0.916 twinfilin actin binding protein 2 [Source:NCBI gene;Acc:415940]
98. DLX5 ENSGALG00000009129 1395 0.916 - - - - - - - - - 0.916 distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
99. MBD4 ENSGALG00000020747 3644 0.914 - - - - - - - - - 0.914 methyl-CpG binding domain 4, DNA glycosylase [Source:NCBI gene;Acc:395428]
100. STAT5 STAT5 1796 0.913 - - - - - - - - - 0.913

There are 291 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA