Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TGDS

Gene Name Gene ID Reads Annotation
TGDS ENSGALG00000016898 3206 TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]











Genes with expression patterns similar to TGDS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TGDS ENSGALG00000016898 3206 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TDP-glucose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:20324]
2. NUP205 ENSGALG00000011662 4157 1.694 - - - - - - 0.866 0.828 - - nucleoporin 205
3. GGCT ENSGALG00000030552 3446 1.599 - - - - - - 0.855 0.744 - - gamma-glutamylcyclotransferase
4. TNFAIP8 ENSGALG00000027761 2383 1.565 - - - - - - 0.829 0.736 - - TNF alpha induced protein 8 [Source:NCBI gene;Acc:427384]
5. RIT1 ENSGALG00000014647 7174 1.556 - - - - - - 0.787 0.769 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
6. C5H15ORF29 C5H15ORF29 3709 1.519 - - - - - - 0.801 0.718 - -
7. CDR2L ENSGALG00000026295 4142 1.506 - - - - - - 0.774 0.732 - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
8. NCOR1 ENSGALG00000004477 4534 1.474 - - - - - - 0.768 0.706 - - nuclear receptor corepressor 1 [Source:HGNC Symbol;Acc:HGNC:7672]
9. TRAPPC4 ENSGALG00000007707 3568 1.456 - - - - - - 0.706 0.750 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
10. YME1L1 ENSGALG00000007492 8652 1.445 - - - - - - 0.726 0.719 - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
11. HSF2 ENSGALG00000038420 5259 1.445 - - - - - - 0.737 0.708 - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
12. APRT ENSGALG00000031000 7535 1.414 - - - - - - 0.714 0.700 - - adenine phosphoribosyltransferase [Source:NCBI gene;Acc:100857155]
13. UCH-L1 UCH-L1 12697 0.91 - - - - - - 0.910 - - -
14. IK ENSGALG00000037172 12100 0.9 - - - - - - 0.900 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
15. HELLS ENSGALG00000005451 7094 0.895 - - - - - - 0.895 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
16. GPN3 ENSGALG00000003807 6320 0.895 - - - - - - 0.895 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
17. CANX ENSGALG00000032148 11297 0.894 - - - - - - 0.894 - - - calnexin [Source:NCBI gene;Acc:416288]
18. VPS29 ENSGALG00000004529 22509 0.892 - - - - - - 0.892 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
19. NSG1 ENSGALG00000015010 5829 0.886 - - - - - - 0.886 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
20. COPS8 ENSGALG00000033385 10166 0.883 - - - - - - 0.883 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
21. EIF3I ENSGALG00000003337 28832 0.881 - - - - - - 0.881 - - - eukaryotic translation initiation factor 3 subunit I [Source:NCBI gene;Acc:419653]
22. MORC3 ENSGALG00000036556 2976 0.88 - - - - - - 0.880 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
23. LSM10 ENSGALG00000002127 2519 0.878 - - - - - - 0.878 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
24. ATG4B ENSGALG00000006298 2288 0.874 - - - - - - 0.874 - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
25. TLCD1 ENSGALG00000003973 17569 0.873 - - - - - - 0.873 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
26. URM1 ENSGALG00000004971 17880 0.87 - - - - - - 0.870 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
27. RBM19 ENSGALG00000008289 10702 0.869 - - - - - - 0.869 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
28. BRD1 ENSGALG00000029379 6047 0.867 - - - - - - 0.867 - - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
29. ENSGALG00000005870 ENSGALG00000005870 4343 0.863 - - - - - - 0.863 - - -
30. ZFYVE19 ENSGALG00000008460 2750 0.863 - - - - - - 0.863 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
31. WIPI1 ENSGALG00000004215 3359 0.862 - - - - - - 0.862 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
32. CHCHD3 ENSGALG00000006489 18592 0.861 - - - - - - 0.861 - - - coiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
33. OCRL ENSGALG00000003920 1812 0.861 - - - - - - 0.861 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
34. KANK1 ENSGALG00000010158 3780 0.861 - - - - - - 0.861 - - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
35. DIEXF ENSGALG00000009887 4782 0.859 - - - - - - 0.859 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
36. MRPL10 ENSGALG00000014387 12386 0.857 - - - - - - 0.857 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
37. CCDC101 CCDC101 9111 0.857 - - - - - - 0.857 - - -
38. RNASEH1 ENSGALG00000016389 2694 0.857 - - - - - - 0.857 - - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
39. FAM193A ENSGALG00000015667 3075 0.857 - - - - - - 0.857 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
40. SNRNP48 ENSGALG00000013005 1468 0.856 - - - - - - 0.856 - - - small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
41. NPHP4 ENSGALG00000000966 1698 0.856 - - - - - - 0.856 - - - nephrocystin 4, transcript variant X5
42. RFT1 ENSGALG00000001945 2446 0.856 - - - - - - 0.856 - - - RFT1 homolog [Source:NCBI gene;Acc:770487]
43. SQLE ENSGALG00000036915 4172 0.854 - - - - - - 0.854 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
44. SRP72 ENSGALG00000011403 13666 0.854 - - - - - - 0.854 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
45. SCAF4 ENSGALG00000033965 2027 0.853 - - - - - - 0.853 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
46. SUGP1 ENSGALG00000042132 2771 0.852 - - - - - - 0.852 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
47. CSTF3 ENSGALG00000011685 4711 0.85 - - - - - - 0.850 - - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
48. MED16 ENSGALG00000001978 2387 0.85 - - - - - - 0.850 - - - mediator complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:17556]
49. PMPCB ENSGALG00000008280 6357 0.849 - - - - - - 0.849 - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
50. DBNDD2 ENSGALG00000003921 8301 0.848 - - - - - - 0.848 - - - dysbindin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15881]
51. KRIT1 ENSGALG00000042651 4486 0.847 - - - - - - 0.847 - - - KRIT1, ankyrin repeat containing [Source:NCBI gene;Acc:420549]
52. SEC22B ENSGALG00000039704 16080 0.847 - - - - - - 0.847 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
53. ZYX ENSGALG00000014688 8686 0.847 - - - - - - 0.847 - - - zyxin [Source:NCBI gene;Acc:418300]
54. PDHX ENSGALG00000033753 2799 0.846 - - - - - - 0.846 - - - pyruvate dehydrogenase complex component X [Source:NCBI gene;Acc:423154]
55. MBNL2 ENSGALG00000016890 3162 0.846 - - - - - - 0.846 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
56. MAD2L1 ENSGALG00000011967 16125 0.845 - - - - - - 0.845 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
57. TAF8 ENSGALG00000003498 2071 0.845 - - - - - - 0.845 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
58. GGA.8379 GGA.8379 4419 0.845 - - - - - - 0.845 - - -
59. RABL5 RABL5 5264 0.844 - - - - - - 0.844 - - -
60. TMEM39B ENSGALG00000003287 4125 0.844 - - - - - - 0.844 - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
61. ERMP1 ENSGALG00000000438 1136 0.844 - - - - - - 0.844 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
62. CMSS1 ENSGALG00000015267 2954 0.844 - - - - - - 0.844 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
63. RBM34 ENSGALG00000029915 5618 0.844 - - - - - - 0.844 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
64. MCEE ENSGALG00000003913 1527 0.842 - - - - - - 0.842 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
65. RNF20 ENSGALG00000015548 7199 0.842 - - - - - - 0.842 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
66. USP54 ENSGALG00000005232 2749 0.841 - - - - - - 0.841 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
67. TADA1L TADA1L 6659 0.841 - - - - - - 0.841 - - -
68. B4GALT3 ENSGALG00000022891 2825 0.841 - - - - - - 0.841 - - - beta-1,4-galactosyltransferase 3
69. ECHDC3 ENSGALG00000006690 1299 0.841 - - - - - - 0.841 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
70. USP8 ENSGALG00000005894 4499 0.84 - - - - - - 0.840 - - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
71. ABHD17A ENSGALG00000041163 5578 0.84 - - - - - - 0.840 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
72. PARL ENSGALG00000002315 15943 0.84 - - - - - - 0.840 - - - presenilin associated rhomboid like
73. TOP3B ENSGALG00000030051 5953 0.84 - - - - - - 0.840 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
74. SPCS2 ENSGALG00000019036 9496 0.839 - - - - - - 0.839 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
75. PARD3B ENSGALG00000042645 2893 0.838 - - - - - - 0.838 - - - par-3 family cell polarity regulator beta [Source:HGNC Symbol;Acc:HGNC:14446]
76. UCK2 ENSGALG00000003510 2512 0.837 - - - - - - 0.837 - - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
77. ABHD17C ENSGALG00000006420 2220 0.836 - - - - - - 0.836 - - - abhydrolase domain containing 17C [Source:NCBI gene;Acc:415479]
78. NAT9 ENSGALG00000007723 2098 0.836 - - - - - - 0.836 - - - N-acetyltransferase 9 (putative), transcript variant X7
79. UBE3B ENSGALG00000013851 1672 0.836 - - - - - - 0.836 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
80. DNAJC12 ENSGALG00000002769 1418 0.836 - - - - - - 0.836 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
81. SMG1 ENSGALG00000006829 1875 0.835 - - - - - - 0.835 - - - SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]
82. NCAPG2 ENSGALG00000006525 2319 0.835 - - - - - - 0.835 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
83. CDC73 ENSGALG00000002469 4586 0.835 - - - - - - 0.835 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
84. RPIA ENSGALG00000015960 2784 0.835 - - - - - - 0.835 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
85. PAPSS1 ENSGALG00000010542 5631 0.835 - - - - - - - 0.835 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
86. NPB NPB 8056 0.834 - - - - - - 0.834 - - -
87. BPHL ENSGALG00000029659 501 0.833 - - - - - - 0.833 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
88. CACYBP ENSGALG00000004554 7320 0.833 - - - - - - 0.833 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
89. MPST ENSGALG00000040840 2122 0.832 - - - - - - 0.832 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
90. DCLK2 ENSGALG00000032386 2253 0.831 - - - - - - 0.831 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
91. RAB3IP ENSGALG00000009959 1652 0.831 - - - - - - 0.831 - - - RAB3A interacting protein, transcript variant X1
92. RNF10 ENSGALG00000036417 8027 0.83 - - - - - - 0.830 - - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
93. TM2D3 ENSGALG00000026271 2566 0.829 - - - - - - 0.829 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
94. CEP170 ENSGALG00000010733 4177 0.829 - - - - - - 0.829 - - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
95. PAPD7 ENSGALG00000013061 2031 0.829 - - - - - - 0.829 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
96. OMA1 ENSGALG00000010861 3328 0.829 - - - - - - 0.829 - - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
97. CCNK ENSGALG00000011138 6416 0.828 - - - - - - 0.828 - - - cyclin K [Source:NCBI gene;Acc:423446]
98. PRPF40A ENSGALG00000012526 7724 0.828 - - - - - - 0.828 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
99. GPC3 ENSGALG00000006087 3744 0.827 - - - - - - 0.827 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
100. SYNGR2 ENSGALG00000027902 6953 0.826 - - - - - - 0.826 - - - Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]

There are 399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA