Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TFAM

Gene Name Gene ID Reads Annotation
TFAM ENSGALG00000002703 19330 transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]











Genes with expression patterns similar to TFAM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TFAM ENSGALG00000002703 19330 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription factor A, mitochondrial [Source:NCBI gene;Acc:373888]
2. ADARB1 ENSGALG00000007527 2480 1.527 - - - 0.714 - - - 0.813 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
3. HSD17B4 ENSGALG00000002187 9581 0.992 - - - - - - 0.992 - - - hydroxysteroid 17-beta dehydrogenase 4 [Source:NCBI gene;Acc:395785]
4. TMEM18 ENSGALG00000028744 11779 0.953 - - - - - - - 0.953 - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
5. STT3B ENSGALG00000011465 11939 0.943 - - - - - - - 0.943 - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
6. APIP ENSGALG00000031286 6838 0.939 - - - - - - - 0.939 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
7. WBP11 ENSGALG00000011745 11182 0.935 - - - - - - - 0.935 - - WW domain binding protein 11, transcript variant X1
8. MED10 ENSGALG00000028336 9343 0.916 - - - - - - - 0.916 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
9. RBP5 ENSGALG00000014662 31268 0.909 - - - - - - - 0.909 - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
10. MAK16 ENSGALG00000001663 7455 0.89 - - - - - - - 0.890 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
11. KXD1 ENSGALG00000036736 3771 0.879 - - - - - - - 0.879 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
12. KDM4B ENSGALG00000034592 6711 0.877 - - - - - - - 0.877 - - lysine demethylase 4B, transcript variant X8
13. ERLIN1 ENSGALG00000003308 6427 0.876 - - - - - - - 0.876 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
14. C3H2ORF43 C3H2ORF43 5628 0.875 - - - - - - - 0.875 - -
15. DDHD1 ENSGALG00000012426 6068 0.874 - - - - - - - 0.874 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
16. ACADSB ENSGALG00000041417 7710 0.872 - - - - - - - 0.872 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
17. LIN7C ENSGALG00000012170 5043 0.871 - - - - - - - 0.871 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
18. VRK1 ENSGALG00000011116 4524 0.87 - - - - - - - 0.870 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
19. ADD1 ENSGALG00000015664 6828 0.869 - - - - - - - 0.869 - - adducin 1 [Source:NCBI gene;Acc:422882]
20. MGST3 ENSGALG00000003445 50408 0.868 - - - - - - - 0.868 - - microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
21. UFD1L 12964 0.868 - - - - - - - 0.868 - - ubiquitin fusion degradation 1 like (yeast)
22. RIOK1 ENSGALG00000012795 4658 0.865 - - - - - - - 0.865 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
23. RHOT1 ENSGALG00000003397 5149 0.862 - - - - - - - 0.862 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
24. CMC1 ENSGALG00000025811 3939 0.862 - - - - - - - 0.862 - - C-X9-C motif containing 1
25. PRORSD1P ENSGALG00000034854 2924 0.859 - - - - - - - 0.859 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
26. FAM192A ENSGALG00000021473 10213 0.857 - - - - - - - 0.857 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
27. KNOP1 ENSGALG00000002042 6251 0.857 - - - - - - - 0.857 - - lysine-rich nucleolar protein 1, transcript variant X1
28. MTRF1 ENSGALG00000016951 3983 0.855 - - - - - - - 0.855 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
29. OMA1 ENSGALG00000010861 3328 0.854 - - - - - - - 0.854 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
30. PACSIN3 ENSGALG00000008231 5423 0.854 - - - - - - - 0.854 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
31. EED ENSGALG00000014060 6467 0.851 - - - - - - - 0.851 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
32. MRPL48 ENSGALG00000017319 9773 0.851 - - - - - - - 0.851 - - mitochondrial ribosomal protein L48 [Source:NCBI gene;Acc:419062]
33. ACAP2 ENSGALG00000007040 4182 0.85 - - - - - - - 0.850 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
34. KCTD9 ENSGALG00000000275 3455 0.85 - - - - - - - 0.850 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
35. CHN1 ENSGALG00000009293 6415 0.845 - - - - - - - 0.845 - - chimerin 1 [Source:NCBI gene;Acc:429021]
36. H2AFY_1 ENSGALG00000040141 4895 0.843 - - - - - - - 0.843 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
37. RNF10 ENSGALG00000036417 8027 0.84 - - - - - - - 0.840 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
38. MB21D1 2460 0.84 - - - - - - - 0.840 - - Mab-21 domain containing 1
39. RPAP1 ENSGALG00000008624 3522 0.84 - - - - - - - 0.840 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
40. FAS ENSGALG00000006351 461 0.839 - - - - - - - 0.839 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
41. PTPN11 ENSGALG00000004821 2658 0.833 - - - - - - - 0.833 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
42. VPS13B 2293 0.832 - - - - - - - 0.832 - - vacuolar protein sorting 13 homolog B
43. SNAPC5 ENSGALG00000007695 4117 0.831 - - - - - - - 0.831 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
44. DENND5B 4077 0.83 - - - - - - - 0.830 - - DENN domain containing 5B, transcript variant X1
45. PGS1 ENSGALG00000007181 3187 0.829 - - - - - - - 0.829 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
46. PPT1 ENSGALG00000003936 2540 0.826 - - - - - - - 0.826 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
47. NFI1 NFI1 6210 0.826 - - - - - - - 0.826 - -
48. SPCS3 ENSGALG00000010839 19106 0.823 - - - - - - - 0.823 - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
49. ENSGALG00000000508 ENSGALG00000000508 19203 0.822 - - - - - - - 0.822 - -
50. EPS15 ENSGALG00000010543 1598 0.822 - - - - - - - 0.822 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
51. QARS ENSGALG00000029980 4207 0.822 - - - - - - - 0.822 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
52. APITD1 APITD1 11830 0.819 - - - - - - - - - 0.819
53. KIAA1432 KIAA1432 1792 0.817 - - - - - - - 0.817 - -
54. NAA50 ENSGALG00000033889 3551 0.817 - - - - - - - 0.817 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
55. RBM6 ENSGALG00000035578 1690 0.815 - - - - - - - 0.815 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
56. VAPB ENSGALG00000007549 15511 0.811 - - - - - - - 0.811 - - VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
57. TECPR2 ENSGALG00000011373 1063 0.809 - - - - - - - 0.809 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
58. FGFRL1 ENSGALG00000037525 1687 0.809 - - - - - - - 0.809 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
59. SNCAIP ENSGALG00000005330 2425 0.809 - - - - - - - 0.809 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
60. gga-mir-1787 ENSGALG00000025542 1373 0.808 - - - - - - - 0.808 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
61. IPO9 ENSGALG00000000397 9263 0.807 - - - - - - - 0.807 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
62. ANKRD17 ENSGALG00000011642 3192 0.807 - - - - - - - 0.807 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
63. FKBP15 ENSGALG00000008838 3677 0.806 - - - - - - - 0.806 - - FK506 binding protein 15 [Source:HGNC Symbol;Acc:HGNC:23397]
64. FBXW8 ENSGALG00000008207 1639 0.803 - - - - - - - 0.803 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
65. ENSGALG00000026930 ENSGALG00000026930 681 0.802 - - - - - - - 0.802 - -
66. TMEM100 ENSGALG00000026465 1785 0.802 - - - - - - - 0.802 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
67. LMNB2 ENSGALG00000000470 4364 0.801 - - - - - - - 0.801 - - lamin B2 [Source:NCBI gene;Acc:396222]
68. RAB6A ENSGALG00000017320 10569 0.8 - - - - - - - 0.800 - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
69. NFASC ENSGALG00000031776 4264 0.796 - - - - - - - 0.796 - - neurofascin [Source:NCBI gene;Acc:419824]
70. DOCK8 481 0.795 - - - - - - - 0.795 - - dedicator of cytokinesis 8, transcript variant X1
71. ZMYM4 ENSGALG00000002499 435 0.795 - - - - - - - 0.795 - - zinc finger MYM-type containing 4, transcript variant X1
72. PAX-6 PAX-6 2650 0.794 - - - - - - - 0.794 - -
73. PSMD14 ENSGALG00000011128 13335 0.793 - - - 0.793 - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
74. LGALS1 ENSGALG00000012420 13993 0.792 - - - - - - - 0.792 - - galectin 1 [Source:NCBI gene;Acc:396491]
75. SLC25A20 ENSGALG00000028227 7685 0.787 - - - - - - - 0.787 - - solute carrier family 25 member 20 [Source:HGNC Symbol;Acc:HGNC:1421]
76. TTYH2 ENSGALG00000026940 15628 0.786 - - - - - - - 0.786 - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
77. IGF2BP2 ENSGALG00000033195 11421 0.78 - - - - - - - 0.780 - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
78. HDHD2 ENSGALG00000034801 6373 0.774 - - - - - - - 0.774 - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
79. TSSC4 ENSGALG00000006530 10413 0.773 - - - - - - - 0.773 - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
80. XPC ENSGALG00000006357 2484 0.764 - - - 0.764 - - - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
81. PSMA2 ENSGALG00000039387 23620 0.761 - - - - - - - 0.761 - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
82. PPFIA1 ENSGALG00000035774 5258 0.76 - - - 0.760 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
83. CRMP1B CRMP1B 18633 0.76 - - - - - - - 0.760 - -
84. ATP8B1 ENSGALG00000030834 521 0.759 - - - - - - - 0.759 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
85. TPRG1L ENSGALG00000001024 9809 0.751 - - - - - - - 0.751 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
86. LOC407092 ENSGALG00000013809 10706 0.75 - - - - - - - 0.750 - - AD012Z, transcript variant X5
87. ENSGALG00000023608 ENSGALG00000023608 1538 0.749 - - - 0.749 - - - - - -
88. SNRPB2 28675 0.747 - - - - - - - 0.747 - - small nuclear ribonucleoprotein polypeptide B2
89. MRPS30 ENSGALG00000014874 3416 0.745 - - - 0.745 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
90. WASL ENSGALG00000008797 5729 0.744 - - - - - - - 0.744 - - Wiskott-Aldrich syndrome like [Source:NCBI gene;Acc:417750]
91. USB1 ENSGALG00000035604 4003 0.744 - - - 0.744 - - - - - - U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]
92. MFAP3 ENSGALG00000004040 6951 0.742 - - - - - - - 0.742 - - microfibrillar associated protein 3 [Source:NCBI gene;Acc:416261]
93. GATAD2A ENSGALG00000042900 6337 0.74 - - - - - - 0.740 - - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
94. TOPBP1 ENSGALG00000034461 3094 0.739 - - - - - - 0.739 - - - DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]
95. UGCG ENSGALG00000015682 2735 0.739 - - - - - - 0.739 - - - UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:12524]
96. GALT ENSGALG00000026195 2002 0.739 - - - - - - 0.739 - - - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
97. CPSF2 ENSGALG00000010783 5236 0.739 - - - - - - - 0.739 - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
98. IGDCC3 ENSGALG00000007371 2434 0.739 - - - - - - 0.739 - - - immunoglobulin superfamily DCC subclass member 3 [Source:HGNC Symbol;Acc:HGNC:9700]
99. SLBP ENSGALG00000015712 5586 0.738 - - - - - - 0.738 - - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
100. PDE6D ENSGALG00000033062 20177 0.738 - - - - - - - - - 0.738 phosphodiesterase 6D [Source:HGNC Symbol;Acc:HGNC:8788]

There are 75 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA