Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TF

Gene Name Gene ID Reads Annotation
TF ENSGALG00000006453 14007 transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]











Genes with expression patterns similar to TF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TF ENSGALG00000006453 14007 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
2. GAL10 GAL10 33355 2.459 - - - 0.858 - - - - 0.782 0.819
3. CDH1 ENSGALG00000000608 6156 2.345 - - - 0.766 - - - - 0.805 0.774 cadherin 3 [Source:NCBI gene;Acc:414845]
4. DCDC2 ENSGALG00000042454 2306 1.64 - - - - - - - - 0.874 0.766 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
5. C9H2ORF82 ENSGALG00000040264 4201 1.631 - - 0.860 - - 0.771 - - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
6. TAC1 ENSGALG00000009737 2211 1.611 - - 0.852 - - 0.759 - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
7. PAX2 ENSGALG00000005689 351 1.609 - - - - - - - - 0.772 0.837 paired box 2 [Source:NCBI gene;Acc:395574]
8. TTR ENSGALG00000015143 9764 1.599 - - - 0.826 0.773 - - - - - transthyretin [Source:NCBI gene;Acc:396277]
9. COL8A1 ENSGALG00000015253 2505 1.585 - - 0.805 - - 0.780 - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
10. T ENSGALG00000011489 2619 1.583 - - 0.807 - - 0.776 - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
11. VTN ENSGALG00000003589 2873 1.577 - 0.800 - 0.777 - - - - - - vitronectin [Source:NCBI gene;Acc:395935]
12. RAB38 ENSGALG00000028018 1046 1.545 - - 0.795 - - 0.750 - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
13. SCIN ENSGALG00000010770 883 1.539 - - 0.783 - - 0.756 - - - - scinderin [Source:NCBI gene;Acc:420588]
14. COL9A1 ENSGALG00000015970 3788 1.534 - - 0.797 - - 0.737 - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
15. HNF1B ENSGALG00000005504 1146 1.533 - - - - - - - - 0.770 0.763 HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
16. COL9A2 ENSGALG00000027526 4685 1.516 - - 0.796 - - 0.720 - - - - collagen type IX alpha 2 chain [Source:NCBI gene;Acc:396524]
17. FAH ENSGALG00000006482 589 1.501 - - - 0.760 - - - - 0.741 - fumarylacetoacetate hydrolase [Source:NCBI gene;Acc:415482]
18. TIMP3 ENSGALG00000028627 8706 1.495 - - 0.790 - - 0.705 - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
19. GSTA3 ENSGALG00000016325 1254 1.453 - - - 0.738 - - - - - 0.715 glutathione S-transferase alpha 3 [Source:NCBI gene;Acc:414896]
20. ARG2 ENSGALG00000009519 19523 0.995 - - - - - - 0.995 - - - arginase 2 [Source:NCBI gene;Acc:423272]
21. RALGDS ENSGALG00000003412 4478 0.994 - - - - - - 0.994 - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
22. WWP1 ENSGALG00000041795 2291 0.994 - - - - - - 0.994 - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:420212]
23. CAMK2D ENSGALG00000041635 3384 0.994 - - - - - - 0.994 - - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
24. VPS13B 2293 0.994 - - - - - - 0.994 - - - vacuolar protein sorting 13 homolog B
25. LYN ENSGALG00000042321 3539 0.994 - - - - - - 0.994 - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
26. ZNF462 ENSGALG00000015451 12653 0.993 - - - - - - 0.993 - - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
27. SGK1 ENSGALG00000013971 2608 0.993 - - - - - - 0.993 - - - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
28. PRKX ENSGALG00000042759 2418 0.993 - - - - - - 0.993 - - - protein kinase X-linked [Source:HGNC Symbol;Acc:HGNC:9441]
29. C5H15ORF57 C5H15ORF57 4113 0.993 - - - - - - 0.993 - - -
30. KIF23 ENSGALG00000008095 9919 0.993 - - - - - - 0.993 - - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
31. RND3 ENSGALG00000026313 9271 0.993 - - - - - - 0.993 - - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
32. TRAPPC8 ENSGALG00000015157 4308 0.993 - - - - - - 0.993 - - - trafficking protein particle complex 8, transcript variant X5
33. RBM24 ENSGALG00000012712 4138 0.993 - - - - - - 0.993 - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
34. ANO5 ENSGALG00000003748 3959 0.993 - - - - - - 0.993 - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
35. C4H8ORF40 C4H8ORF40 6145 0.993 - - - - - - 0.993 - - -
36. C10orf54 C10orf54 2444 0.993 - - - - - - 0.993 - - -
37. ENSGALG00000027132 ENSGALG00000027132 1704 0.993 - - - - - - 0.993 - - -
38. DIABLO ENSGALG00000004412 9499 0.992 - - - - - - 0.992 - - - diablo IAP-binding mitochondrial protein, transcript variant X3
39. OGT ENSGALG00000005425 31074 0.992 - - - - - - 0.992 - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
40. TMF1 ENSGALG00000013408 3344 0.992 - - - - - - 0.992 - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
41. STRAP ENSGALG00000013092 13100 0.992 - - - - - - 0.992 - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
42. SEPHS1 ENSGALG00000014575 10701 0.991 - - - - - - 0.991 - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
43. CHTOP ENSGALG00000042129 24112 0.989 - - - - - - 0.989 - - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
44. AP1M1 ENSGALG00000003959 31761 0.989 - - - - - - 0.989 - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
45. NDUFA4 ENSGALG00000025999 53323 0.988 - - - - - - 0.988 - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
46. SPPL2A ENSGALG00000031348 16700 0.986 - - - - - - 0.986 - - - signal peptide peptidase like 2A [Source:NCBI gene;Acc:415450]
47. ANXA2 ENSGALG00000003770 18252 0.986 - - - - - - 0.986 - - - annexin A2 [Source:NCBI gene;Acc:396297]
48. UBE2I ENSGALG00000006428 18421 0.986 - - - - - - 0.986 - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
49. CCT8 ENSGALG00000015821 12161 0.984 - - - - - - 0.984 - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
50. SDC3 ENSGALG00000035184 14096 0.982 - - - - - - 0.982 - - - syndecan 3 [Source:NCBI gene;Acc:396343]
51. TBRG4 ENSGALG00000038102 9269 0.982 - - - - - - 0.982 - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
52. SERPINE2 ENSGALG00000005135 16108 0.981 - - - - - - 0.981 - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
53. PCMT1 ENSGALG00000012388 7778 0.978 - - - - - - 0.978 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
54. ARHGDIA ENSGALG00000008443 39103 0.977 - - - - - - 0.977 - - - Rho GDP dissociation inhibitor alpha [Source:NCBI gene;Acc:769231]
55. PUF60 ENSGALG00000039901 26902 0.977 - - - - - - 0.977 - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
56. NCL ENSGALG00000032930 66655 0.971 - - - - - - 0.971 - - - nucleolin [Source:NCBI gene;Acc:396201]
57. UBE2D3 ENSGALG00000012311 39831 0.958 - - - - - - 0.958 - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
58. CENPE ENSGALG00000013208 12337 0.946 - - - - - - 0.946 - - - centromere protein E, transcript variant X4
59. GOLPH3 ENSGALG00000028267 9692 0.946 - - - - - - 0.946 - - - golgi phosphoprotein 3, transcript variant X1
60. ENSGALG00000021397 ENSGALG00000021397 51155 0.944 - - - - - - 0.944 - - -
61. PPDPF ENSGALG00000005849 16711 0.935 - - - - - - - - 0.935 - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
62. PCBD1 ENSGALG00000027835 18019 0.922 - - - - - - - - 0.922 - pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]
63. FGG ENSGALG00000009268 418 0.911 - - - 0.911 - - - - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
64. NPHS2 ENSGALG00000004163 850 0.908 - - - - - - - - 0.908 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
65. PLS3 ENSGALG00000005930 12625 0.904 - - - - - - 0.904 - - - plastin 3 [Source:NCBI gene;Acc:422222]
66. PROX1 ENSGALG00000009791 1184 0.901 - - - 0.901 - - - - - - prospero homeobox 1 [Source:NCBI gene;Acc:395802]
67. FGA ENSGALG00000009266 291 0.897 - - - 0.897 - - - - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
68. LIX1 ENSGALG00000015290 7589 0.897 - - - - - - - - 0.897 - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
69. PTPRQ ENSGALG00000010935 626 0.895 - - - - - - - - 0.895 - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
70. SRMS ENSGALG00000005852 174 0.893 - - - - - - - - 0.893 - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
71. FGB ENSGALG00000009262 1169 0.89 - - - 0.890 - - - - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
72. FAM49A ENSGALG00000016463 6345 0.888 - - - - - - - - 0.888 - family with sequence similarity 49 member A [Source:NCBI gene;Acc:421949]
73. SMARCB1 ENSGALG00000005983 20548 0.883 - - - - - - 0.883 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
74. CIDEA ENSGALG00000034500 405 0.88 - - - - - - - - 0.880 - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
75. NFKBIZ ENSGALG00000015346 770 0.877 - - - - - - - - 0.877 - NFKB inhibitor zeta [Source:NCBI gene;Acc:418404]
76. ZBTB7C ENSGALG00000033408 711 0.873 - - - - - - - - 0.873 - zinc finger and BTB domain containing 7C [Source:HGNC Symbol;Acc:HGNC:31700]
77. TBC1D23 ENSGALG00000015273 4856 0.866 - - - - - - 0.866 - - - TBC1 domain family member 23 [Source:NCBI gene;Acc:418383]
78. HSP90AB1 ENSGALG00000010175 77935 0.863 - - - - - - 0.863 - - - heat shock protein 90 alpha family class B member 1 [Source:NCBI gene;Acc:396188]
79. LCAT ENSGALG00000028928 484 0.861 - - - 0.861 - - - - - - lecithin-cholesterol acyltransferase [Source:NCBI gene;Acc:396136]
80. OTOP1 ENSGALG00000030356 95 0.859 - - - 0.859 - - - - - - otopetrin 1 [Source:HGNC Symbol;Acc:HGNC:19656]
81. MEIS2 ENSGALG00000039118 81591 0.852 - - - - - - 0.852 - - - Meis homeobox 2 [Source:NCBI gene;Acc:395588]
82. SST ENSGALG00000007361 1383 0.85 - - 0.850 - - - - - - - somatostatin [Source:NCBI gene;Acc:396279]
83. FNDC5 ENSGALG00000003567 3328 0.849 - - - - - - - - 0.849 - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
84. ZNF217 ZNF217 14511 0.843 - - - - - - 0.843 - - -
85. OIT3 ENSGALG00000004345 4886 0.836 - - - 0.836 - - - - - - oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
86. OAZ OAZ 45951 0.829 - - - - - - 0.829 - - -
87. SERPINC1 ENSGALG00000004591 68 0.827 - - - 0.827 - - - - - - Gallus gallus serpin family C member 1 (SERPINC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001353945]
88. ENSGALG00000024035 ENSGALG00000024035 544 0.825 - - - - - - - - 0.825 -
89. COL9A3 ENSGALG00000005628 2842 0.824 - - 0.824 - - - - - - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
90. RPLP2 ENSGALG00000034811 152607 0.817 - - - - - - 0.817 - - - ribosomal protein lateral stalk subunit P2 [Source:HGNC Symbol;Acc:HGNC:10377]
91. PGO2 PGO2 589 0.817 - - - - - - - - - 0.817
92. SULT1C SULT1C 118 0.816 - - - 0.816 - - - - - -
93. LCP1 ENSGALG00000016986 801 0.816 - - - - - - - - 0.816 - lymphocyte cytosolic protein 1 [Source:NCBI gene;Acc:418852]
94. HBG1 HBG1 468163 0.813 - - - - - - - - 0.813 -
95. B3GNT7 ENSGALG00000007701 929 0.811 - - - - - 0.811 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
96. LGALS2 ENSGALG00000003213 1089 0.809 - - - 0.809 - - - - - - galectin 2, transcript variant X2
97. SCARA3 ENSGALG00000026651 2559 0.808 - - 0.808 - - - - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
98. ELOVL7 ENSGALG00000014730 1820 0.807 - - - - - - - - 0.807 - ELOVL fatty acid elongase 7 [Source:NCBI gene;Acc:431579]
99. HBE 329974 0.806 - - - - - - - - 0.806 - hemoglobin subunit epsilon
100. ASTL ENSGALG00000037220 2775 0.805 - - - - - - - - - 0.805 astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]

There are 107 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA