Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TDRD3

Gene Name Gene ID Reads Annotation
TDRD3 ENSGALG00000016936 3412 tudor domain containing 3 [Source:NCBI gene;Acc:418823]











Genes with expression patterns similar to TDRD3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TDRD3 ENSGALG00000016936 3412 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tudor domain containing 3 [Source:NCBI gene;Acc:418823]
2. PAXIP1 ENSGALG00000036064 3120 2.708 - - - - 0.989 - 0.742 0.977 - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
3. AEN ENSGALG00000044204 2633 1.964 - - - - 0.992 - - 0.972 - - apoptosis enhancing nuclease, transcript variant X1
4. SH3GLB1 ENSGALG00000006284 12764 1.92 - - - - 0.969 - - 0.951 - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
5. HIBADH ENSGALG00000033207 3540 1.753 - - - - - - 0.779 0.974 - - 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
6. ADSL ENSGALG00000012034 10280 1.719 - - - - 0.986 - 0.733 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
7. WSB2 ENSGALG00000008151 13246 1.714 - - - - 0.981 - 0.733 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
8. RHBDF1 ENSGALG00000007434 2359 1.709 - - - - 0.993 - 0.716 - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
9. TMEM167A ENSGALG00000027332 13862 1.704 - - - - 0.981 - 0.723 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
10. YOD1 ENSGALG00000037597 2989 1.685 - - - - - - 0.710 0.975 - - YOD1 deubiquitinase [Source:NCBI gene;Acc:428266]
11. ZC3H15 ENSGALG00000041857 19808 1.651 - - - - 0.939 - - 0.712 - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
12. DHX38 ENSGALG00000000787 6913 1.646 - - - - - - 0.708 0.938 - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
13. SCML2 ENSGALG00000016537 9348 1.586 - - - - - - 0.721 0.865 - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
14. METTL23 ENSGALG00000001790 7906 1.544 - - - - - - 0.744 0.800 - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
15. BIRC6 ENSGALG00000010541 7999 1.507 - - - - - - 0.736 0.771 - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
16. ALKBH8 ENSGALG00000017170 699 1.447 - - 0.747 - - - - - 0.700 - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
17. PSMB7 ENSGALG00000001103 42683 1.43 - - - - 0.727 - 0.703 - - - proteasome subunit beta 7 [Source:NCBI gene;Acc:378915]
18. CSNK1E ENSGALG00000032257 2165 0.994 - - - - 0.994 - - - - - casein kinase 1 epsilon [Source:NCBI gene;Acc:378891]
19. PCIF1 ENSGALG00000023547 867 0.994 - - - - 0.994 - - - - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
20. DARS ENSGALG00000012355 2887 0.993 - - - - 0.993 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
21. MAP3K13 ENSGALG00000006655 632 0.993 - - - - 0.993 - - - - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
22. TMEM65 ENSGALG00000037371 776 0.992 - - - - 0.992 - - - - - transmembrane protein 65 [Source:NCBI gene;Acc:428387]
23. ENSGALG00000005720 ENSGALG00000005720 1666 0.992 - - - - 0.992 - - - - -
24. C9orf89 C9orf89 3056 0.991 - - - - 0.991 - - - - -
25. MTG1 ENSGALG00000003549 5032 0.991 - - - - 0.991 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
26. CDR2L ENSGALG00000026295 4142 0.991 - - - - 0.991 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
27. KAT6A ENSGALG00000003641 2631 0.991 - - - - 0.991 - - - - - lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
28. MXD4 ENSGALG00000015688 1472 0.991 - - - - 0.991 - - - - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
29. FOCAD ENSGALG00000015071 3677 0.991 - - - - 0.991 - - - - - focadhesin [Source:NCBI gene;Acc:427233]
30. ITPK1 ENSGALG00000034898 4212 0.991 - - - - 0.991 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
31. RBM15B 5416 0.99 - - - - 0.990 - - - - - RNA binding motif protein 15B
32. MAP1LC3A ENSGALG00000038721 2230 0.99 - - - - 0.990 - - - - - microtubule associated protein 1 light chain 3 alpha
33. CRIPT ENSGALG00000010014 4311 0.99 - - - - 0.990 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
34. NOL12 ENSGALG00000012410 5658 0.99 - - - - 0.990 - - - - - nucleolar protein 12
35. CLSPN ENSGALG00000002346 2590 0.99 - - - - 0.990 - - - - - claspin [Source:NCBI gene;Acc:428223]
36. PDXP ENSGALG00000023131 2663 0.989 - - - - 0.989 - - - - - pyridoxal phosphatase [Source:HGNC Symbol;Acc:HGNC:30259]
37. NMT1 ENSGALG00000000857 5770 0.989 - - - - 0.989 - - - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
38. LSMD1 LSMD1 2562 0.989 - - - - 0.989 - - - - -
39. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.988 - - - - - - - 0.988 - -
40. PIK3CD ENSGALG00000002583 1036 0.988 - - - - 0.988 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
41. COPG2 ENSGALG00000008144 4542 0.988 - - - - 0.988 - - - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
42. KDM1A ENSGALG00000033469 20632 0.988 - - - - 0.988 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
43. GLB1L2 ENSGALG00000001604 4057 0.987 - - - - 0.987 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
44. FBXW7 ENSGALG00000010103 5982 0.987 - - - - 0.987 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
45. TIMM21 ENSGALG00000013709 3215 0.987 - - - - 0.987 - - - - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
46. CNOT2 ENSGALG00000010042 7612 0.986 - - - - 0.986 - - - - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
47. HABP4 ENSGALG00000012628 2894 0.986 - - - - 0.986 - - - - - hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
48. GPALPP1 ENSGALG00000031567 4221 0.985 - - - - 0.985 - - - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
49. SRP68 ENSGALG00000002062 7370 0.985 - - - - 0.985 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
50. AIP ENSGALG00000040247 4166 0.984 - - - - 0.984 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
51. BTBD7 4136 0.984 - - - - 0.984 - - - - - BTB domain containing 7, transcript variant X2
52. PALD1 ENSGALG00000004465 3553 0.983 - - - - - - - 0.983 - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
53. FAM18B1 ENSGALG00000001335 5177 0.982 - - - - 0.982 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
54. CTNNBIP1 ENSGALG00000026306 8049 0.982 - - - - - - - 0.982 - - catenin beta interacting protein 1 [Source:NCBI gene;Acc:771460]
55. PRPSAP2 ENSGALG00000005064 5549 0.982 - - - - - - - 0.982 - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
56. BRCC3 ENSGALG00000005383 4844 0.981 - - - - 0.981 - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
57. LRRFIP2 ENSGALG00000033102 8250 0.981 - - - - - - - 0.981 - - LRR binding FLII interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]
58. MANF ENSGALG00000002362 7518 0.981 - - - - 0.981 - - - - - mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
59. ARHGAP32 ENSGALG00000043511 7916 0.981 - - - - - - - 0.981 - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
60. LFNG ENSGALG00000038515 5178 0.981 - - - - 0.981 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
61. MRPL32 ENSGALG00000037258 6861 0.981 - - - - 0.981 - - - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
62. SOD2 ENSGALG00000011661 13178 0.981 - - - - 0.981 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
63. NPB NPB 8056 0.98 - - - - - - - 0.980 - -
64. B4GAL-T7 B4GAL-T7 12356 0.98 - - - - 0.980 - - - - -
65. C6ORF162 C6ORF162 4217 0.98 - - - - - - - 0.980 - -
66. gga-mir-1778 ENSGALG00000025181 8765 0.98 - - - - 0.980 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
67. ZNF326 ENSGALG00000006113 15141 0.979 - - - - 0.979 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
68. SKIV2L2 ENSGALG00000014709 2926 0.979 - - - - - - - 0.979 - - Ski2 like RNA helicase 2 [Source:NCBI gene;Acc:427137]
69. TXNDC9 ENSGALG00000032090 6804 0.978 - - - - 0.978 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
70. GATAD2A ENSGALG00000042900 6337 0.978 - - - - - - - 0.978 - - GATA zinc finger domain containing 2A [Source:NCBI gene;Acc:420109]
71. DNTTIP1 ENSGALG00000003575 4687 0.978 - - - - - - - 0.978 - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
72. SMAD1 ENSGALG00000009977 3540 0.977 - - - - - - - 0.977 - - SMAD family member 1 [Source:NCBI gene;Acc:395680]
73. ATRIP ENSGALG00000004670 3647 0.976 - - - - - - - 0.976 - - ATR interacting protein [Source:NCBI gene;Acc:415949]
74. ANXA11 ENSGALG00000043826 5189 0.976 - - - - 0.976 - - - - - annexin A11 [Source:NCBI gene;Acc:423637]
75. SNX3 ENSGALG00000015304 1631 0.976 - - - - - - - 0.976 - - sorting nexin 3 [Source:NCBI gene;Acc:421772]
76. COPA ENSGALG00000009153 11618 0.976 - - - - 0.976 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
77. MPPED1 ENSGALG00000014186 5726 0.976 - - - - 0.976 - - - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
78. TIA1 ENSGALG00000013879 16330 0.976 - - - - 0.976 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
79. SEC24B ENSGALG00000035482 3430 0.976 - - - - - - - 0.976 - - SEC24 homolog B, COPII coat complex component [Source:NCBI gene;Acc:422523]
80. SYAP1 ENSGALG00000016548 3347 0.976 - - - - - - - 0.976 - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
81. HEATR6 ENSGALG00000005516 3347 0.976 - - - - - - - 0.976 - - HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
82. SMPD4 ENSGALG00000006455 2270 0.975 - - - - - - - 0.975 - - sphingomyelin phosphodiesterase 4, transcript variant X1
83. TPP2 ENSGALG00000016865 7509 0.975 - - - - 0.975 - - - - - tripeptidyl peptidase 2 [Source:HGNC Symbol;Acc:HGNC:12016]
84. DRG1 ENSGALG00000006921 10791 0.975 - - - - 0.975 - - - - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
85. SUGT1 ENSGALG00000016946 22881 0.975 - - - - 0.975 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
86. ARNT ENSGALG00000000751 3495 0.974 - - - - - - - 0.974 - - aryl hydrocarbon receptor nuclear translocator [Source:NCBI gene;Acc:374026]
87. ILKAP ENSGALG00000006253 7388 0.974 - - - - - - - 0.974 - - ILK associated serine/threonine phosphatase [Source:HGNC Symbol;Acc:HGNC:15566]
88. SPRYD7 ENSGALG00000017010 1910 0.973 - - - - - - - 0.973 - - SPRY domain containing 7 [Source:NCBI gene;Acc:418871]
89. B4GALT3 ENSGALG00000022891 2825 0.973 - - - - - - - 0.973 - - beta-1,4-galactosyltransferase 3
90. THBS4 ENSGALG00000014804 4228 0.973 - - - - - - - 0.973 - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
91. ARL1 ENSGALG00000011651 3230 0.973 - - - - - - - 0.973 - - ADP ribosylation factor like GTPase 1 [Source:NCBI gene;Acc:417934]
92. THAP5 ENSGALG00000009494 6540 0.973 - - - - - - - 0.973 - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
93. RIPK1 ENSGALG00000012827 3405 0.973 - - - - - - - 0.973 - - receptor interacting serine/threonine kinase 1 [Source:NCBI gene;Acc:378921]
94. LTN1 ENSGALG00000015804 3784 0.972 - - - - - - - 0.972 - - listerin E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:418482]
95. MAP2K4 ENSGALG00000032178 5982 0.972 - - - - 0.972 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
96. AK1 ENSGALG00000029150 5935 0.972 - - - - - - - 0.972 - - adenylate kinase 1 [Source:NCBI gene;Acc:396002]
97. EIF4G3 ENSGALG00000010084 5881 0.972 - - - - 0.972 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
98. KLHL13 KLHL13 2712 0.972 - - - - - - - 0.972 - -
99. SRFBP1 ENSGALG00000005316 6826 0.972 - - - - - - - 0.972 - - serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]
100. SFRP2 ENSGALG00000009241 4716 0.972 - - - - 0.972 - - - - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]

There are 378 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA