Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TDRD12

Gene Name Gene ID Reads Annotation
TDRD12 ENSGALG00000004704 19 tudor domain containing 12, transcript variant X3











Genes with expression patterns similar to TDRD12

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TDRD12 ENSGALG00000004704 19 6 - - 1.000 1.000 1.000 1.000 1.000 - - 1.000 tudor domain containing 12, transcript variant X3
2. ENSGALG00000019428 ENSGALG00000019428 1 1.902 - - - - - 0.902 1.000 - - -
3. S100A9 ENSGALG00000024272 103 1.731 - - - - - - 0.849 - - 0.882 S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
4. CCDC157 ENSGALG00000007907 10 1.692 - - - - - 0.902 - - - 0.790 coiled-coil domain containing 157 [Source:HGNC Symbol;Acc:HGNC:33854]
5. PDLIM3 ENSGALG00000013414 52 1.643 - - - - - 0.902 - - - 0.741 PDZ and LIM domain 3 [Source:NCBI gene;Acc:414873]
6. ENSGALG00000010883 ENSGALG00000010883 10 1.637 - - - - - 0.902 - - - 0.735
7. KLF13 ENSGALG00000026590 13 1.637 - - - 0.735 - 0.902 - - - - Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]
8. ACVR2A ENSGALG00000012444 324 1.593 - - - 0.731 0.862 - - - - - activin A receptor type 2A [Source:NCBI gene;Acc:396324]
9. SLC22A15 ENSGALG00000015016 12 1.591 - - 0.856 - - - - - - 0.735 solute carrier family 22 member 15 [Source:HGNC Symbol;Acc:HGNC:20301]
10. ENSGALG00000011799 ENSGALG00000011799 37 1.562 - - - - - 0.849 - - - 0.713
11. CLMN ENSGALG00000030719 60 1.51 - - 0.778 - - - - - - 0.732 calmin [Source:HGNC Symbol;Acc:HGNC:19972]
12. SNORA29 SNORA29 8 1 - - - 1.000 - - - - - -
13. PDE3A ENSGALG00000013143 28 1 - - - - - - 1.000 - - - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
14. AVD ENSGALG00000023622 22 1 - - - - - - 1.000 - - - avidin [Source:NCBI gene;Acc:396260]
15. MUSK ENSGALG00000015728 7 1 - - - - - - 1.000 - - - muscle associated receptor tyrosine kinase [Source:NCBI gene;Acc:373897]
16. OTOG ENSGALG00000006208 17 1 - - - - - - 1.000 - - - otogelin [Source:HGNC Symbol;Acc:HGNC:8516]
17. U2_1 U2_1 13 1 - - - - - - 1.000 - - -
18. CBS ENSGALG00000016196 8 1 - - - 1.000 - - - - - - cystathionine-beta-synthase, transcript variant X3
19. TESK2 ENSGALG00000010230 9 1 - - - - - - 1.000 - - - testis associated actin remodelling kinase 2 [Source:HGNC Symbol;Acc:HGNC:11732]
20. TNNI3K ENSGALG00000011353 10 1 - - - - - - 1.000 - - - TNNI3 interacting kinase [Source:NCBI gene;Acc:100533999]
21. ATP2C2 ENSGALG00000035743 1 1 - - - - - - 1.000 - - - ATPase secretory pathway Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:29103]
22. gga-mir-99a ENSGALG00000018242 192 1 - - - - - - 1.000 - - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
23. ZNF654 ENSGALG00000022866 14 1 - - - - - - 1.000 - - - zinc finger protein 654 [Source:HGNC Symbol;Acc:HGNC:25612]
24. SLC16A4 ENSGALG00000000417 168 1 - - - - - - 1.000 - - - solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]
25. PLEKHG4 ENSGALG00000023898 65 1 - - - - - - 1.000 - - - pleckstrin homology and RhoGEF domain containing G4 [Source:HGNC Symbol;Acc:HGNC:24501]
26. LRIG1 ENSGALG00000007483 19 1 - - - - - - 1.000 - - - leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]
27. RANBP3L 19 1 - - - - - - 1.000 - - - RAN binding protein 3 like, transcript variant X2
28. HDAC10 ENSGALG00000041251 57 1 - - - - - - 1.000 - - - histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
29. GNRH1 9 1 - - - - - - 1.000 - - - gonadotropin releasing hormone 1
30. HGD ENSGALG00000014966 6 1 - - - - - - 1.000 - - - homogentisate 1,2-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4892]
31. CACNA1I ENSGALG00000035051 27 1 - - - - - - 1.000 - - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
32. SLC6A5 ENSGALG00000003908 3 1 - - - 1.000 - - - - - - solute carrier family 6 member 5 [Source:HGNC Symbol;Acc:HGNC:11051]
33. MYH1G ENSGALG00000028612 7 1 - - - 1.000 - - - - - - Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
34. TTLL7 ENSGALG00000008850 49 1 - - - - - - 1.000 - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
35. MCAM ENSGALG00000030027 26 0.993 - - - - 0.993 - - - - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
36. ENSGALG00000016601 ENSGALG00000016601 16 0.99 - - - - - 0.990 - - - -
37. CYR61 ENSGALG00000008661 43 0.988 - - - - 0.988 - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
38. GRIN1 ENSGALG00000008898 18 0.983 - - - - 0.983 - - - - - glutamate ionotropic receptor NMDA type subunit 1 [Source:NCBI gene;Acc:404296]
39. C10orf67 15 0.982 - - - - 0.982 - - - - - chromosome 10 open reading frame 67, transcript variant X2
40. IRG1 IRG1 21 0.981 - - - - 0.981 - - - - -
41. TJP3 ENSGALG00000000748 45 0.98 - - - - 0.980 - - - - - tight junction protein 3 [Source:HGNC Symbol;Acc:HGNC:11829]
42. TMCC1 ENSGALG00000008487 65 0.975 - - - - 0.975 - - - - - transmembrane and coiled-coil domain family 1 [Source:HGNC Symbol;Acc:HGNC:29116]
43. ENSGALG00000025953 ENSGALG00000025953 65 0.974 - - - - 0.974 - - - - -
44. PHC2 62 0.97 - - - - 0.970 - - - - - polyhomeotic homolog 2
45. LMTK2 ENSGALG00000003479 46 0.963 - - - - 0.963 - - - - - lemur tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:17880]
46. CCDC39 ENSGALG00000021855 23 0.959 - - - - 0.959 - - - - - coiled-coil domain containing 39
47. RAB3IL1 ENSGALG00000007203 23 0.959 - - 0.959 - - - - - - - RAB3A interacting protein like 1 [Source:NCBI gene;Acc:423123]
48. SDCCAG3 1208 0.958 - - - - 0.958 - - - - - serologically defined colon cancer antigen 3
49. OGCHI OGCHI 3 0.956 - - - - - - 0.956 - - -
50. FAM208B 24 0.955 - - - - 0.955 - - - - - family with sequence similarity 208 member B, transcript variant X3
51. SYT10 ENSGALG00000012911 17 0.954 - - - - 0.954 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
52. RTDR1 RTDR1 104 0.951 - - - - 0.951 - - - - -
53. HOPX ENSGALG00000011404 10 0.951 - - - - - 0.951 - - - - HOP homeobox [Source:NCBI gene;Acc:395241]
54. RNGTT ENSGALG00000015787 12 0.948 - - - - - 0.948 - - - - RNA guanylyltransferase and 5'-phosphatase [Source:HGNC Symbol;Acc:HGNC:10073]
55. KCTD18 ENSGALG00000008155 26 0.948 - - - - - 0.948 - - - - potassium channel tetramerization domain containing 18 [Source:HGNC Symbol;Acc:HGNC:26446]
56. TMEM164 ENSGALG00000008076 734 0.941 - - - - 0.941 - - - - - transmembrane protein 164 [Source:NCBI gene;Acc:422344]
57. LARP4B ENSGALG00000006672 57 0.937 - - - - 0.937 - - - - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
58. ENSGALG00000024018 ENSGALG00000024018 37 0.933 - - - - 0.933 - - - - -
59. MAP3K21 ENSGALG00000011008 54 0.93 - - - - 0.930 - - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
60. OPRL1 ENSGALG00000027965 53 0.929 - - - 0.929 - - - - - - Gallus gallus opioid related nociceptin receptor 1 (OPRL1), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318978]
61. ERN2 ENSGALG00000027592 186 0.928 - - - - 0.928 - - - - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
62. CRAT ENSGALG00000037443 78 0.925 - - - - 0.925 - - - - - carnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]
63. CD109 ENSGALG00000015910 11 0.921 - - - 0.921 - - - - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
64. AANAT ENSGALG00000001955 23 0.92 - - - - 0.920 - - - - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
65. ZHX2 ENSGALG00000043827 13 0.92 - - - - - - - - - 0.920 zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
66. CYBA ENSGALG00000029367 125 0.917 - - - - - - 0.917 - - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
67. MUL1 ENSGALG00000042761 1312 0.917 - - - - 0.917 - - - - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
68. SDR42E1 ENSGALG00000005456 586 0.917 - - - - 0.917 - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
69. TRAF6 ENSGALG00000007932 12 0.916 - - - 0.916 - - - - - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
70. LRP1B ENSGALG00000012407 125 0.916 - - - - 0.916 - - - - - LDL receptor related protein 1B [Source:HGNC Symbol;Acc:HGNC:6693]
71. PIK3AP1 ENSGALG00000005547 71 0.915 - - - - - - 0.915 - - - phosphoinositide-3-kinase adaptor protein 1 [Source:NCBI gene;Acc:374268]
72. RAP2A ENSGALG00000016889 26 0.914 - - - 0.914 - - - - - - RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
73. FRS2 ENSGALG00000009966 63 0.91 - - - - 0.910 - - - - - fibroblast growth factor receptor substrate 2 [Source:NCBI gene;Acc:417845]
74. CCDC180 109 0.909 - - - - 0.909 - - - - - coiled-coil domain containing 180
75. MARVELD3 ENSGALG00000012886 155 0.909 - - - - 0.909 - - - - - MARVEL domain containing 3
76. PARD6B ENSGALG00000007994 15 0.903 - - - 0.903 - - - - - - par-6 family cell polarity regulator beta [Source:NCBI gene;Acc:419352]
77. SS2R SS2R 3 0.902 - - - - - 0.902 - - - -
78. PAPPA2 40 0.902 - - - - - 0.902 - - - - pappalysin 2
79. DYDC1 ENSGALG00000002432 54 0.902 - - - - - 0.902 - - - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
80. SLC28A3 ENSGALG00000012593 131 0.902 - - - - - 0.902 - - - - solute carrier family 28 member 3 [Source:HGNC Symbol;Acc:HGNC:16484]
81. ENSGALG00000016201 ENSGALG00000016201 1 0.902 - - - - - 0.902 - - - -
82. E2F3 ENSGALG00000012680 21 0.902 - - - - - 0.902 - - - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
83. RASGRP1 ENSGALG00000009740 15 0.902 - - - - - 0.902 - - - - RAS guanyl releasing protein 1 [Source:HGNC Symbol;Acc:HGNC:9878]
84. FSD2 ENSGALG00000005996 2 0.902 - - - - - 0.902 - - - - fibronectin type III and SPRY domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18024]
85. GJA3 ENSGALG00000017137 0 0.902 - - - - - 0.902 - - - - gap junction protein alpha 3 [Source:NCBI gene;Acc:428084]
86. DLX6 ENSGALG00000023195 29 0.902 - - - - - 0.902 - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
87. TROJANZ ENSGALG00000027747 37 0.902 - - - - - 0.902 - - - - Gallus gallus phosphotyrosine phosphatase kappa-like-Z (TROJANZ), mRNA. [Source:RefSeq mRNA;Acc:NM_001318459]
88. ICOS ENSGALG00000008656 27 0.902 - - - - - 0.902 - - - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
89. LRIT3 ENSGALG00000026627 6 0.902 - - - - - 0.902 - - - - leucine rich repeat, Ig-like and transmembrane domains 3 [Source:HGNC Symbol;Acc:HGNC:24783]
90. TMEM179 ENSGALG00000011590 0 0.902 - - - - - 0.902 - - - - transmembrane protein 179 [Source:NCBI gene;Acc:423491]
91. ENSGALG00000022812 ENSGALG00000022812 0 0.902 - - - - - 0.902 - - - -
92. KLHL12 ENSGALG00000000518 5 0.902 - - - - - 0.902 - - - - kelch like family member 12 [Source:HGNC Symbol;Acc:HGNC:19360]
93. D2HGDH ENSGALG00000039535 3 0.902 - - - - - 0.902 - - - - D-2-hydroxyglutarate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:28358]
94. TRIM42 ENSGALG00000005286 2 0.902 - - - - - 0.902 - - - - tripartite motif containing 42 [Source:HGNC Symbol;Acc:HGNC:19014]
95. STXBP1 ENSGALG00000040003 157 0.902 - - - - - 0.902 - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
96. TRMT61A ENSGALG00000011522 14 0.902 - - - - - 0.902 - - - - tRNA methyltransferase 61A [Source:HGNC Symbol;Acc:HGNC:23790]
97. THSD7B ENSGALG00000012362 8 0.902 - - - - - 0.902 - - - - thrombospondin type 1 domain containing 7B [Source:HGNC Symbol;Acc:HGNC:29348]
98. LOC100859850 ENSGALG00000000803 3 0.902 - - - - - 0.902 - - - - lisH domain-containing protein C1711.05-like
99. SCN3A ENSGALG00000011040 62 0.902 - - - - - 0.902 - - - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
100. ATG14 ENSGALG00000012148 2 0.902 - - - - - 0.902 - - - - autophagy related 14 [Source:HGNC Symbol;Acc:HGNC:19962]

There are 271 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA