Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TDRD1

Gene Name Gene ID Reads Annotation
TDRD1 ENSGALG00000046180 612 tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]











Genes with expression patterns similar to TDRD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TDRD1 ENSGALG00000046180 612 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
2. FAM65C 36 1.653 - - 0.841 - - 0.812 - - - - family with sequence similarity 65 member C, transcript variant X29
3. ZDHHC8 ENSGALG00000002124 35 1.601 - - - - - 0.769 0.832 - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
4. MAP3K8 ENSGALG00000007356 188 1.58 - - - - - 0.812 0.768 - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
5. ANTXR2 ENSGALG00000043675 52 1.534 - - 0.702 - - - 0.832 - - - ANTXR cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:21732]
6. GNA12 ENSGALG00000004368 692 1 - - - - - - - 1.000 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
7. CHRNA3 ENSGALG00000003014 6 1 - - - - - - - - - 1.000 cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
8. C9orf89 C9orf89 3056 1 - - - - - - - 1.000 - -
9. STAMBP ENSGALG00000042555 1362 1 - - - - - - - 1.000 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
10. TMEM69 ENSGALG00000010279 716 1 - - - - - - - 1.000 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
11. VEGFC ENSGALG00000010847 2197 1 - - - - - - - 1.000 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
12. CREB1 ENSGALG00000008494 2219 1 - - - - - - - 1.000 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
13. USP30 ENSGALG00000040265 2000 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
14. FAM73B FAM73B 2 1 - - - - - - - - - 1.000
15. SIN3A ENSGALG00000001644 1141 1 - - - - - - - 1.000 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
16. USP42 ENSGALG00000003378 1392 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
17. PRRX2 ENSGALG00000028236 1990 1 - - - - - - - 1.000 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
18. ENSGALG00000028413 ENSGALG00000028413 551 1 - - - - - - - 1.000 - -
19. CTU2 4818 0.999 - - - - - - - 0.999 - - cytosolic thiouridylase subunit 2, transcript variant X3
20. RRBP1 ENSGALG00000008676 5376 0.999 - - - - - - - 0.999 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
21. TNFRSF21 ENSGALG00000016719 2762 0.999 - - - - - - - 0.999 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
22. SLBP ENSGALG00000015712 5586 0.999 - - - - - - - 0.999 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
23. SLC52A3 ENSGALG00000006194 3952 0.998 - - - - - - - 0.998 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
24. VPS36 ENSGALG00000017026 3658 0.998 - - - - - - - 0.998 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
25. ZNF462 ENSGALG00000015451 12653 0.998 - - - - - - - 0.998 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
26. ADAR ENSGALG00000021475 6004 0.997 - - - - - - - 0.997 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
27. CWC22 ENSGALG00000009001 5984 0.997 - - - - - - - 0.997 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
28. PPAT ENSGALG00000013728 7563 0.997 - - - - - - - 0.997 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
29. GYG1 ENSGALG00000035535 6311 0.997 - - - - - - - 0.997 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
30. FAT1 ENSGALG00000013579 6030 0.996 - - - - - - - 0.996 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
31. PHAX ENSGALG00000014691 8114 0.996 - - - - - - - 0.996 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
32. INTS2 ENSGALG00000005269 6966 0.995 - - - - - - - 0.995 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
33. PTK7 ENSGALG00000008609 8081 0.994 - - - - - - - 0.994 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
34. LMO7 ENSGALG00000016920 3809 0.994 - - - - - - - 0.994 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
35. KLHDC2 ENSGALG00000012244 12903 0.993 - - - - - - - 0.993 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
36. PDCD6 ENSGALG00000013400 7611 0.991 - - - - - - - 0.991 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
37. MAP4K3 ENSGALG00000039720 5124 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
38. NAA30 ENSGALG00000012098 4681 0.98 - - - - - - - 0.980 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
39. WDFY3 10775 0.979 - - - - - - - 0.979 - - WD repeat and FYVE domain containing 3, transcript variant X7
40. LAMTOR2 ENSGALG00000029881 35356 0.977 - - - - - - - 0.977 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
41. CRYBG3 7 0.971 - - - - - - - - - 0.971 crystallin beta-gamma domain containing 3, transcript variant X2
42. NSUN4 ENSGALG00000010360 3567 0.963 - - - - - - - 0.963 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
43. C11orf57 C11orf57 4971 0.961 - - - - - - - 0.961 - -
44. SPATA20 ENSGALG00000006857 3506 0.961 - - - - - - - 0.961 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
45. CPSF4 ENSGALG00000004714 14353 0.961 - - - - - - - 0.961 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
46. ACTR6 ENSGALG00000040976 31271 0.959 - - - - - - - 0.959 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
47. BMP4 ENSGALG00000012429 4306 0.956 - - - - - - - 0.956 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
48. TIMM23B ENSGALG00000002089 8122 0.953 - - - - - - - 0.953 - - translocase of inner mitochondrial membrane 23 homolog B
49. MCM6 ENSGALG00000012348 12523 0.95 - - - - - - - 0.950 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
50. CSNK2A1 ENSGALG00000006197 41409 0.947 - - - - - - - 0.947 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
51. MYBL2 ENSGALG00000003503 15875 0.942 - - - - - - - 0.942 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
52. MED6 ENSGALG00000029743 9414 0.941 - - - - - - - 0.941 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
53. RPL7L1 ENSGALG00000011974 20292 0.94 - - - - - - - 0.940 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
54. ZNF367 ENSGALG00000012629 3215 0.937 - - - - - - - 0.937 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
55. FARP1 ENSGALG00000016886 13132 0.937 - - - - - - - 0.937 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
56. PDCL3 ENSGALG00000016772 14897 0.937 - - - - - - - 0.937 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
57. DHCR24 ENSGALG00000010798 3963 0.936 - - - - - - - 0.936 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
58. TOPAZ1 18 0.931 - - - - - - - - - 0.931 testis and ovary specific PAZ domain containing 1, transcript variant X6
59. GPR78 ENSGALG00000015595 3 0.931 - - - - - - - - - 0.931 G protein-coupled receptor 78
60. C9orf152 C9orf152 3 0.931 - - - - - - - - - 0.931
61. ENSGALG00000023934 ENSGALG00000023934 3 0.931 - - - - - - - - - 0.931
62. ATP6V1AL ENSGALG00000000048 21 0.931 - - - - - - - - - 0.931 ATPase H+ transporting V1 subunit A-like, transcript variant X2
63. RD3 ENSGALG00000009861 2 0.931 - - - - - - - - - 0.931 retinal degeneration 3, GUCY2D regulator [Source:HGNC Symbol;Acc:HGNC:19689]
64. NEU4 ENSGALG00000006361 1 0.931 - - - - - - - - - 0.931 neuraminidase 4 [Source:HGNC Symbol;Acc:HGNC:21328]
65. SYT10 ENSGALG00000012911 17 0.931 - - - - - - - - - 0.931 synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
66. NOL4_1 ENSGALG00000015198 3 0.931 - - - - - - - - - 0.931 nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]
67. FAM154A FAM154A 1 0.931 - - - - - - - - - 0.931
68. SEMA5A_1 ENSGALG00000028685 4 0.931 - - - - - - - - - 0.931 semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]
69. LRRC52 ENSGALG00000003443 20 0.931 - - - - - - - - - 0.931 leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
70. AQP9 ENSGALG00000004261 4 0.931 - - - - - - - - - 0.931 aquaporin 9 [Source:NCBI gene;Acc:415402]
71. ROBO3 ENSGALG00000045816 1 0.931 - - - - - - - - - 0.931 roundabout guidance receptor 3 [Source:HGNC Symbol;Acc:HGNC:13433]
72. GCNT4 ENSGALG00000014944 1 0.931 - - - - - - - - - 0.931 glucosaminyl (N-acetyl) transferase 4, core 2 [Source:HGNC Symbol;Acc:HGNC:17973]
73. ENSGALG00000021318 ENSGALG00000021318 1 0.931 - - - - - - - - - 0.931
74. C3H6ORF138 C3H6ORF138 2 0.931 - - - - - - - - - 0.931
75. ENSGALG00000009123 ENSGALG00000009123 9 0.931 - - - - - - - - - 0.931
76. HSPA12A ENSGALG00000009248 7783 0.93 - - - - - - - 0.930 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
77. LAPTM4A ENSGALG00000016479 15973 0.925 - - - - - - - 0.925 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
78. MGST1 ENSGALG00000013098 17632 0.924 - - - - - - - 0.924 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
79. THRAP3 ENSGALG00000002144 21958 0.924 - - - - - - - 0.924 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
80. AUTS2 ENSGALG00000001153 24 0.913 - - - - - - - - - 0.913 AUTS2, activator of transcription and developmental regulator [Source:HGNC Symbol;Acc:HGNC:14262]
81. DERL1 ENSGALG00000033950 15074 0.908 - - - - - - - 0.908 - - derlin 1 [Source:NCBI gene;Acc:420350]
82. TAF15 ENSGALG00000002060 12320 0.899 - - - - - - - 0.899 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
83. REM1 ENSGALG00000045602 4 0.898 - - - - - 0.898 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
84. LCT ENSGALG00000012260 21 0.898 - - - - - 0.898 - - - - lactase [Source:NCBI gene;Acc:424294]
85. TRPV6 ENSGALG00000014746 3 0.898 - - - - - 0.898 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
86. ASB15 ENSGALG00000008814 7 0.898 - - - - - 0.898 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
87. C15orf60 C15orf60 16 0.898 - - - - - 0.898 - - - -
88. HSD11B1b ENSGALG00000001369 1 0.898 - - - - - 0.898 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
89. CPSF4L ENSGALG00000004441 4 0.898 - - - - - 0.898 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
90. LOC396365 ENSGALG00000027219 7 0.898 - - - - - 0.898 - - - - preprogastrin
91. SLC51A ENSGALG00000007478 6 0.898 - - - - - 0.898 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
92. ENSGALG00000008309 ENSGALG00000008309 7 0.898 - - - - - 0.898 - - - -
93. MRAP2 ENSGALG00000015838 7 0.898 - - - - - 0.898 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
94. C1QTNF4 ENSGALG00000008080 3 0.898 - - - - - 0.898 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
95. ENSGALG00000016499 ENSGALG00000016499 4 0.898 - - - - - 0.898 - - - -
96. TMEM56 ENSGALG00000005580 10 0.898 - - - - - 0.898 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
97. CHRNB3 ENSGALG00000015384 9 0.898 - - - - - 0.898 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
98. XK ENSGALG00000016262 60 0.894 - - - - - - - - - 0.894 X-linked Kx blood group [Source:NCBI gene;Acc:427991]
99. SGK196 SGK196 83 0.894 - - - - - 0.894 - - - -
100. CAMKK1 ENSGALG00000001617 64 0.893 - - - - - - - - - 0.893 calcium/calmodulin dependent protein kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:1469]

There are 194 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA