Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TDP2

Gene Name Gene ID Reads Annotation
TDP2 ENSGALG00000013637 6595 tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]











Genes with expression patterns similar to TDP2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TDP2 ENSGALG00000013637 6595 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
2. CHMP4B ENSGALG00000002095 17422 2.485 - - 0.705 - - - 0.993 0.787 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
3. ENSGALG00000001861 ENSGALG00000001861 10150 1.81 - - - - - - 0.999 0.811 - -
4. SIAH1 ENSGALG00000003916 6682 1.574 - - - - - - 0.815 0.759 - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
5. SPDL1 ENSGALG00000001942 4403 1.557 - - 0.791 - - - - 0.766 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
6. LCMT1 ENSGALG00000005973 1300 1.548 - - 0.724 - - - - 0.824 - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
7. SHMT1 ENSGALG00000005046 1430 1.531 - - 0.829 - - - - 0.702 - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
8. HINT3 ENSGALG00000044342 5674 1.526 - - 0.738 - - - - 0.788 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
9. BTBD9 ENSGALG00000010131 1870 1.473 - - 0.730 - - - - 0.743 - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
10. CENPO ENSGALG00000016609 1699 1.436 - - 0.723 - - - - 0.713 - - centromere protein O [Source:NCBI gene;Acc:422014]
11. WDYHV1 ENSGALG00000030059 2961 0.999 - - - - - - 0.999 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
12. GBX-1 GBX-1 1430 0.999 - - - - - - 0.999 - - -
13. HSPA14 ENSGALG00000035201 7372 0.999 - - - - - - 0.999 - - - heat shock protein family A (Hsp70) member 14
14. KIAA0922 4430 0.999 - - - - - - 0.999 - - - KIAA0922, transcript variant X4
15. MAPKAPK2 ENSGALG00000000883 6174 0.999 - - - - - - 0.999 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
16. UTP14A ENSGALG00000024039 8532 0.999 - - - - - - 0.999 - - - UTP14A small subunit processome component
17. ECE-1 ECE-1 3057 0.999 - - - - - - 0.999 - - -
18. PRRC2B 1997 0.999 - - - - - - 0.999 - - - proline rich coiled-coil 2B, transcript variant X12
19. THBS4 ENSGALG00000014804 4228 0.999 - - - - - - 0.999 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
20. RAP1GDS1 ENSGALG00000012222 10078 0.999 - - - - - - 0.999 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
21. PRRX1 ENSGALG00000003324 4859 0.999 - - - - - - 0.999 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
22. TUSC3 ENSGALG00000013674 2848 0.999 - - - - - - 0.999 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
23. MRPS27 ENSGALG00000015002 6541 0.999 - - - - - - 0.999 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
24. NAP1L4 ENSGALG00000006446 10868 0.999 - - - - - - 0.999 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
25. PIK3C2B ENSGALG00000037043 4522 0.999 - - - - - - 0.999 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
26. C1H21ORF33 ENSGALG00000019171 8910 0.999 - - - - - - 0.999 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
27. ARCN1 ENSGALG00000007430 21499 0.999 - - - - - - 0.999 - - - archain 1 [Source:NCBI gene;Acc:770561]
28. DNMT3B ENSGALG00000041461 12959 0.998 - - - - - - 0.998 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
29. EEF1E1 ENSGALG00000012781 22615 0.996 - - - - - - 0.996 - - - eukaryotic translation elongation factor 1 epsilon 1
30. DHX36 ENSGALG00000043082 17619 0.996 - - - - - - 0.996 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
31. AURKAIP1 ENSGALG00000001555 14715 0.996 - - - - - - 0.996 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
32. AP2M1 ENSGALG00000008432 16249 0.996 - - - - - - 0.996 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
33. ENSGALG00000021694 ENSGALG00000021694 26011 0.994 - - - - - - 0.994 - - -
34. KIF2A ENSGALG00000014737 16391 0.993 - - - - - - 0.993 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
35. BRT-1 BRT-1 26083 0.992 - - - - - - 0.992 - - -
36. gga-mir-762 ENSGALG00000025437 24823 0.99 - - - - - - 0.990 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
37. UBE2C ENSGALG00000026380 27639 0.986 - - - - - - 0.986 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
38. CWC15 ENSGALG00000017207 30922 0.986 - - - - - - 0.986 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
39. MTX2 ENSGALG00000009264 17304 0.983 - - - - - - 0.983 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
40. RPL39 ENSGALG00000008620 63315 0.983 - - - - - - 0.983 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
41. ATF4 ENSGALG00000012135 53361 0.981 - - - - - - 0.981 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
42. DYNLRB1 ENSGALG00000034509 28361 0.98 - - - - - - 0.980 - - - dynein light chain roadblock-type 1
43. PSMA7 ENSGALG00000030411 42436 0.977 - - - - - - 0.977 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
44. TRA2B ENSGALG00000006531 40566 0.975 - - - - - - 0.975 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
45. CBX3 ENSGALG00000011038 40977 0.97 - - - - - - 0.970 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
46. RPL19 ENSGALG00000001658 277294 0.91 - - - - - - 0.910 - - - ribosomal protein L19 [Source:NCBI gene;Acc:420003]
47. EMC3 ENSGALG00000003738 10363 0.907 - - - - - - - 0.907 - - ER membrane protein complex subunit 3 [Source:NCBI gene;Acc:415936]
48. ERLIN2 ENSGALG00000003092 18251 0.897 - - - - - - - 0.897 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
49. NUDT7 ENSGALG00000034395 7396 0.895 - - - - - - - 0.895 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
50. SREK1 ENSGALG00000014775 13961 0.887 - - - - - - - 0.887 - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
51. PMPCB ENSGALG00000008280 6357 0.883 - - 0.883 - - - - - - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
52. MSMO1 ENSGALG00000009560 6928 0.883 - - - - - - - 0.883 - - methylsterol monooxygenase 1 [Source:NCBI gene;Acc:422423]
53. GFM1 ENSGALG00000009634 7213 0.877 - - - - - - - 0.877 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
54. ATR ENSGALG00000002663 4626 0.876 - - - - - - - 0.876 - - ATR serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:882]
55. ANP32B ENSGALG00000037483 190705 0.876 - - - - - - 0.876 - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:NCBI gene;Acc:420087]
56. RFC1 ENSGALG00000014298 6516 0.874 - - - - - - - 0.874 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
57. STRN3 ENSGALG00000040464 9045 0.873 - - - - - - - 0.873 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
58. HSCB ENSGALG00000005706 12953 0.872 - - - - - - - 0.872 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
59. PTPMT1 ENSGALG00000008091 6160 0.87 - - - - - - - 0.870 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
60. SIPA1L1 ENSGALG00000009381 4019 0.869 - - - - - - - 0.869 - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
61. KIAA1143 ENSGALG00000035952 6735 0.868 - - - - - - - 0.868 - - KIAA1143 [Source:NCBI gene;Acc:420709]
62. SYS1 ENSGALG00000003929 4487 0.867 - - - - - - - 0.867 - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
63. TRAF3IP1 ENSGALG00000004236 7094 0.866 - - - - - - - 0.866 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
64. BPNT1 ENSGALG00000009576 7445 0.866 - - - - - - - 0.866 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
65. NSA2 ENSGALG00000014942 45193 0.865 - - - - - - 0.865 - - - NSA2, ribosome biogenesis homolog [Source:NCBI gene;Acc:427206]
66. AHCY ENSGALG00000033677 35555 0.863 - - - - - - 0.863 - - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
67. FN1 ENSGALG00000003578 37024 0.863 - - - - - - 0.863 - - - fibronectin 1 [Source:NCBI gene;Acc:396133]
68. NUCKS1 ENSGALG00000000708 80882 0.862 - - - - - - 0.862 - - - nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:NCBI gene;Acc:404775]
69. PLK1 ENSGALG00000006110 12892 0.861 - - - - - - - 0.861 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
70. RCN2 ENSGALG00000039284 17848 0.86 - - - - - - - 0.860 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
71. DAD1 ENSGALG00000035626 32604 0.859 - - - - - - - 0.859 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
72. NAA20 ENSGALG00000012587 11349 0.857 - - - - - - - 0.857 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
73. PWP1 ENSGALG00000012631 10536 0.856 - - - - - - - 0.856 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
74. NUP93 ENSGALG00000003010 16504 0.854 - - - - - - - 0.854 - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
75. EIF2B4 ENSGALG00000033575 3801 0.853 - - 0.853 - - - - - - - eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
76. PANK1 ENSGALG00000006431 2910 0.853 - - 0.853 - - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
77. PSMD13 ENSGALG00000043684 14720 0.853 - - - - - - - 0.853 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
78. MRPL47 ENSGALG00000013759 9044 0.852 - - - - - - - 0.852 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
79. MAEA ENSGALG00000013310 13230 0.851 - - - - - - - 0.851 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
80. TM4SF18 4553 0.848 - - - - - - - 0.848 - - transmembrane 4 L six family member 18, transcript variant X2
81. HMGB3 ENSGALG00000009071 12011 0.848 - - - - - - - 0.848 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
82. ENSGALG00000012451 ENSGALG00000012451 7912 0.847 - - - - - - - 0.847 - -
83. FAM18B1 ENSGALG00000001335 5177 0.847 - - - - - - - 0.847 - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
84. CCNC ENSGALG00000015471 6497 0.847 - - - - - - - 0.847 - - cyclin C [Source:NCBI gene;Acc:421791]
85. UHRF2 ENSGALG00000015052 1268 0.847 - - 0.847 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
86. NAA30 ENSGALG00000012098 4681 0.846 - - 0.846 - - - - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
87. PSMB3 ENSGALG00000001597 22588 0.846 - - - - - - - 0.846 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
88. ARFIP1 ENSGALG00000041361 7351 0.846 - - - - - - - 0.846 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
89. MSH2 ENSGALG00000008962 9709 0.845 - - - - - - - 0.845 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
90. SNX7 ENSGALG00000005478 4736 0.844 - - - - - - - 0.844 - - sorting nexin 7 [Source:HGNC Symbol;Acc:HGNC:14971]
91. MSH6 ENSGALG00000008957 6396 0.843 - - - - - - - 0.843 - - mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]
92. ACP1 ENSGALG00000016363 10636 0.843 - - - - - - - 0.843 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
93. ZNF217 ZNF217 14511 0.842 - - - - - - - 0.842 - -
94. C1H11ORF73 C1H11ORF73 10071 0.841 - - - - - - - 0.841 - -
95. AZIN1 ENSGALG00000029295 11085 0.84 - - - - - - - 0.840 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
96. GPN3 ENSGALG00000003807 6320 0.838 - - - - - - - 0.838 - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
97. MRPS22 ENSGALG00000005367 8307 0.838 - - - - - - - 0.838 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
98. MRPL55 5995 0.836 - - - - - - - 0.836 - - mitochondrial ribosomal protein L55
99. DPY30 ENSGALG00000010621 6818 0.835 - - - - - - - 0.835 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
100. ABHD12 ENSGALG00000008525 5763 0.834 - - - - - - - 0.834 - - abhydrolase domain containing 12 [Source:NCBI gene;Acc:421249]

There are 592 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA