Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TCF3

Gene Name Gene ID Reads Annotation
TCF3 ENSGALG00000001093 15624 transcription factor 3 [Source:NCBI gene;Acc:395146]











Genes with expression patterns similar to TCF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TCF3 ENSGALG00000001093 15624 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription factor 3 [Source:NCBI gene;Acc:395146]
2. EZH2 ENSGALG00000043399 15881 1.662 - - - - 0.799 - - 0.863 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
3. ALDH4A1 ENSGALG00000042184 9432 1.63 - - - - 0.830 - 0.800 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
4. ENSGALG00000007509 ENSGALG00000007509 18441 1.595 - - - - 0.763 - 0.832 - - -
5. UTP3 ENSGALG00000011553 8814 1.594 - - - - 0.789 - 0.805 - - - UTP3, small subunit processome component homolog (S. cerevisiae)
6. ADH5 ENSGALG00000012245 38217 1.59 - - - - 0.770 - 0.820 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
7. CREPT CREPT 17142 1.558 - - - - - - 0.787 - - 0.771
8. COPE ENSGALG00000003153 19444 1.552 - - - - 0.808 - 0.744 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
9. CCDC58 ENSGALG00000014413 9022 1.517 - - - - 0.744 - 0.773 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
10. FAM96B 14435 1.504 - - - - - - 0.726 - - 0.778 family with sequence similarity 96 member B
11. H2AFY_1 ENSGALG00000040141 4895 1.477 - - - - 0.771 - 0.706 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
12. ZFPM2 ENSGALG00000040079 942 1.449 - - - - 0.735 - - - - 0.714 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
13. SIAH2 ENSGALG00000010395 2126 1.409 - - - - - - - 0.708 - 0.701 siah E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:10858]
14. TFDP1 ENSGALG00000016823 17019 0.936 - - - - - - - 0.936 - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
15. DNAJC9 ENSGALG00000002701 19249 0.892 - - - - - - - 0.892 - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
16. MAGOH 28688 0.883 - - - - - - 0.883 - - - mago homolog, exon junction complex core component
17. PRRC2C 3925 0.882 - - - - - - - 0.882 - - proline rich coiled-coil 2C, transcript variant X17
18. DDT ENSGALG00000006350 16117 0.881 - - - - - - - 0.881 - - D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
19. ATRX ENSGALG00000007843 34172 0.88 - - - - - - 0.880 - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
20. COL4A1 ENSGALG00000036798 12749 0.876 - - - - - - 0.876 - - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
21. RNF220 ENSGALG00000010109 3114 0.875 - - - - - - - 0.875 - - ring finger protein 220 [Source:NCBI gene;Acc:424580]
22. PTBP1 ENSGALG00000001962 66983 0.868 - - - - - - 0.868 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
23. NARS ENSGALG00000040506 9506 0.861 - - - - - - 0.861 - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
24. BSG ENSGALG00000001328 37947 0.861 - - - - - - - 0.861 - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
25. HMBS ENSGALG00000042939 13360 0.86 - - - - - - - 0.860 - - hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
26. NAA25 ENSGALG00000041821 12729 0.859 - - - - - - 0.859 - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
27. ARF6 ENSGALG00000026944 22014 0.858 - - - - 0.858 - - - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
28. FUNDC1 ENSGALG00000028187 10511 0.855 - - - - - - 0.855 - - - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
29. RCC2 ENSGALG00000031684 28067 0.848 - - - - - - 0.848 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
30. MCM4 ENSGALG00000012915 13151 0.845 - - - - - - 0.845 - - - minichromosome maintenance complex component 4
31. MGST1 ENSGALG00000013098 17632 0.843 - - - - - - 0.843 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
32. UQCR10 ENSGALG00000008066 52968 0.836 - - - - - - - 0.836 - - ubiquinol-cytochrome c reductase, complex III subunit X [Source:NCBI gene;Acc:770937]
33. ACAA2 ENSGALG00000031142 29220 0.834 - - - - - - 0.834 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
34. CLPTM1L ENSGALG00000013187 9733 0.831 - - - - - - 0.831 - - - CLPTM1 like [Source:NCBI gene;Acc:420973]
35. ICT1 ICT1 11725 0.829 - - - - - - 0.829 - - -
36. ARL6IP5 ENSGALG00000038904 12956 0.829 - - - - - - 0.829 - - - ADP ribosylation factor like GTPase 6 interacting protein 5 [Source:NCBI gene;Acc:426074]
37. KIF20A ENSGALG00000035030 10249 0.828 - - - - - - 0.828 - - - kinesin family member 20A [Source:NCBI gene;Acc:416220]
38. PTDSS1 ENSGALG00000030185 5515 0.828 - - - - - - 0.828 - - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
39. METAP2 ENSGALG00000011377 16311 0.826 - - - - 0.826 - - - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
40. PSMC2 ENSGALG00000008236 25980 0.825 - - - - - - 0.825 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
41. GLRX5 ENSGALG00000011079 28943 0.825 - - - - 0.825 - - - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
42. VIMENTIN VIMENTIN 33105 0.819 - - - - 0.819 - - - - -
43. NDUFB5 ENSGALG00000009076 32963 0.819 - - - - 0.819 - - - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:NCBI gene;Acc:424978]
44. PLS3 ENSGALG00000005930 12625 0.815 - - - - 0.815 - - - - - plastin 3 [Source:NCBI gene;Acc:422222]
45. XPA ENSGALG00000028998 8621 0.815 - - - - - - 0.815 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
46. CHD4 ENSGALG00000013565 25695 0.814 - - - - 0.814 - - - - - chromodomain helicase DNA binding protein 4
47. WDR33 ENSGALG00000002043 6340 0.813 - - - - - - - 0.813 - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
48. SCAMP5 ENSGALG00000014116 8877 0.812 - - - - 0.812 - - - - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
49. AIMP1 ENSGALG00000010553 17994 0.811 - - - - 0.811 - - - - - aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
50. GALNTL4 GALNTL4 3548 0.81 - - - - 0.810 - - - - -
51. UBE2E3 ENSGALG00000020793 9517 0.81 - - - - 0.810 - - - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
52. TMEM70 ENSGALG00000033568 10720 0.808 - - - - 0.808 - - - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
53. MSH2 ENSGALG00000008962 9709 0.807 - - - - 0.807 - - - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
54. SEC22B ENSGALG00000039704 16080 0.806 - - - - 0.806 - - - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
55. APPBP2 ENSGALG00000005314 6447 0.806 - - - - 0.806 - - - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
56. PRPS1 ENSGALG00000004908 27994 0.806 - - - - 0.806 - - - - - phosphoribosyl pyrophosphate synthetase 1
57. MYC ENSGALG00000033631 16949 0.805 - - - - 0.805 - - - - - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
58. MKKS ENSGALG00000009013 9301 0.804 - - - - 0.804 - - - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
59. NCBP1 ENSGALG00000002087 8907 0.804 - - - - 0.804 - - - - - nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
60. COPS4 ENSGALG00000011130 21515 0.801 - - - - - - 0.801 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
61. CCNK ENSGALG00000011138 6416 0.801 - - - - 0.801 - - - - - cyclin K [Source:NCBI gene;Acc:423446]
62. TAF13 ENSGALG00000015185 11410 0.8 - - - - 0.800 - - - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
63. AN1ZNF5L ENSGALG00000014589 21148 0.8 - - - - 0.800 - - - - - AN1-type zinc finger protein 5-like, transcript variant X2
64. MRPL19 ENSGALG00000016731 22670 0.799 - - - - - - 0.799 - - - mitochondrial ribosomal protein L19, transcript variant X1
65. PSMG3 ENSGALG00000004203 11240 0.798 - - - - - - 0.798 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
66. TRAPPC6B ENSGALG00000010157 7567 0.798 - - - - 0.798 - - - - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
67. PDHB ENSGALG00000029576 12254 0.797 - - - - 0.797 - - - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
68. DNAJC15 ENSGALG00000016965 9163 0.796 - - - - - - 0.796 - - - DnaJ heat shock protein family (Hsp40) member C15 [Source:NCBI gene;Acc:418838]
69. DCAF12 ENSGALG00000005800 6419 0.795 - - - - 0.795 - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
70. MICALL1 ENSGALG00000012265 3753 0.792 - - - - 0.792 - - - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
71. SLC25A24 ENSGALG00000001938 3671 0.792 - - - - 0.792 - - - - - solute carrier family 25 member 24 [Source:HGNC Symbol;Acc:HGNC:20662]
72. MAPKAPK2 ENSGALG00000000883 6174 0.791 - - - - 0.791 - - - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
73. GLI2 ENSGALG00000011630 3347 0.791 - - - - 0.791 - - - - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
74. MDFIC ENSGALG00000026838 3881 0.79 - - - - 0.790 - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
75. TMEM184C ENSGALG00000010019 7856 0.79 - - - - 0.790 - - - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
76. ALKBH1 ENSGALG00000010485 1828 0.789 - - - - - - - - - 0.789 alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]
77. EXOSC3 ENSGALG00000002426 7255 0.789 - - - - 0.789 - - - - - exosome component 3 [Source:NCBI gene;Acc:423626]
78. LARP1 ENSGALG00000040109 14808 0.788 - - - - - - 0.788 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
79. DGKB ENSGALG00000033561 170 0.788 - - - - - - - - - 0.788 diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
80. SNRPF ENSGALG00000011409 23557 0.787 - - - - - - 0.787 - - - small nuclear ribonucleoprotein polypeptide F [Source:NCBI gene;Acc:417916]
81. TTC37 ENSGALG00000014670 5715 0.787 - - - - 0.787 - - - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
82. NQO2 ENSGALG00000025747 2287 0.787 - - - - 0.787 - - - - - N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
83. PHB ENSGALG00000038604 21632 0.787 - - - - 0.787 - - - - - prohibitin [Source:NCBI gene;Acc:419980]
84. NUPL1 NUPL1 8197 0.786 - - - - 0.786 - - - - -
85. TCEA2 ENSGALG00000005976 9143 0.786 - - - - 0.786 - - - - - transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
86. ITM2A ENSGALG00000004107 29262 0.786 - - - - 0.786 - - - - - integral membrane protein 2A [Source:NCBI gene;Acc:422145]
87. COPG COPG 6949 0.785 - - - - 0.785 - - - - -
88. RPF1 ENSGALG00000008796 9809 0.785 - - - - 0.785 - - - - - ribosome production factor 1 homolog
89. ROMO1 ENSGALG00000027416 9560 0.785 - - - - 0.785 - - - - - reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
90. ENSGALG00000004283 ENSGALG00000004283 4771 0.784 - - - - 0.784 - - - - -
91. PPP1R7 ENSGALG00000031766 22187 0.784 - - - - 0.784 - - - - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
92. TP53BP2 ENSGALG00000042816 12368 0.784 - - - - - - 0.784 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
93. CKAP2 ENSGALG00000017025 25020 0.784 - - - - 0.784 - - - - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
94. ENSGALG00000009771 ENSGALG00000009771 10273 0.784 - - - - 0.784 - - - - -
95. ATAD5 ENSGALG00000003294 4830 0.784 - - - - 0.784 - - - - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
96. FASTKD2 ENSGALG00000008529 7439 0.784 - - - - - - 0.784 - - - FAST kinase domains 2 [Source:HGNC Symbol;Acc:HGNC:29160]
97. GTF2B ENSGALG00000006205 6950 0.784 - - - - 0.784 - - - - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
98. PPIB ENSGALG00000002210 46778 0.783 - - - - - - 0.783 - - - peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
99. ITPA ENSGALG00000003250 7722 0.783 - - - - 0.783 - - - - - inosine triphosphatase [Source:NCBI gene;Acc:424390]
100. SMC6 ENSGALG00000016467 3321 0.783 - - - - 0.783 - - - - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]

There are 308 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA