Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TCEB3

Gene Name Gene ID Reads Annotation
TCEB3 ENSGALG00000034625 184577 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]











Genes with expression patterns similar to TCEB3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TCEB3 ENSGALG00000034625 184577 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
2. KPNA2 ENSGALG00000003584 76058 1.593 0.793 - - - 0.800 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
3. RPL31 ENSGALG00000016775 188657 1.566 0.780 - - - - - 0.786 - - - ribosomal protein L31 [Source:NCBI gene;Acc:418710]
4. POLR2E ENSGALG00000002591 26405 1.524 - - - - 0.736 - 0.788 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
5. RPL23A ENSGALG00000003966 369097 1.474 0.744 0.730 - - - - - - - - ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
6. UQCRH ENSGALG00000017380 55734 1.474 0.718 - - - 0.756 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
7. U2AF1 ENSGALG00000016198 45027 1.45 0.709 - - - 0.741 - - - - - U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:395370]
8. RPL35 ENSGALG00000035677 252113 1.427 0.702 - - - - - - - - 0.725 ribosomal protein L35 [Source:NCBI gene;Acc:374133]
9. HSPE1 ENSGALG00000009070 87567 1.405 0.704 0.701 - - - - - - - - heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
10. MAU2 ENSGALG00000002969 10604 0.856 - - - - - - 0.856 - - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
11. TXN ENSGALG00000015704 170016 0.844 0.844 - - - - - - - - - thioredoxin [Source:NCBI gene;Acc:396437]
12. RPS21 ENSGALG00000005338 293390 0.838 0.838 - - - - - - - - - ribosomal protein S21 [Source:HGNC Symbol;Acc:HGNC:10409]
13. RPS23 ENSGALG00000015617 430299 0.829 0.829 - - - - - - - - - ribosomal protein S23
14. RPL29 ENSGALG00000026978 271790 0.828 0.828 - - - - - - - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
15. TOP2B ENSGALG00000011300 25048 0.809 - - - - 0.809 - - - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
16. RPL23 ENSGALG00000001634 246592 0.807 0.807 - - - - - - - - - Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
17. PRDX1 ENSGALG00000010243 151918 0.806 0.806 - - - - - - - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
18. COX6A1 ENSGALG00000007205 72629 0.806 - - - - 0.806 - - - - - cytochrome c oxidase subunit 6A1 [Source:NCBI gene;Acc:416978]
19. SLC16A1 ENSGALG00000001717 18566 0.803 - - - - 0.803 - - - - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
20. ATP5G3 168626 0.8 0.800 - - - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
21. PSME3 ENSGALG00000002937 41148 0.799 - - - - 0.799 - - - - - proteasome activator subunit 3 [Source:NCBI gene;Acc:420017]
22. CHPKCI CHPKCI 36217 0.798 0.798 - - - - - - - - -
23. CLNS1A ENSGALG00000008574 25675 0.797 0.797 - - - - - - - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
24. MINOS1 ENSGALG00000004039 37740 0.797 - - - - 0.797 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
25. RPS24 ENSGALG00000004871 173117 0.797 0.797 - - - - - - - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
26. RPL36 ENSGALG00000000474 237707 0.795 0.795 - - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
27. G3BP1 ENSGALG00000004160 36795 0.793 - - - - 0.793 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
28. RPL27 ENSGALG00000002837 302752 0.791 0.791 - - - - - - - - - ribosomal protein L27 [Source:NCBI gene;Acc:396280]
29. CHERP ENSGALG00000003824 11489 0.788 - - - - - - 0.788 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
30. UBE2D3 ENSGALG00000012311 39831 0.786 - - - - 0.786 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
31. GPBP1L1 ENSGALG00000010276 10253 0.781 - - - - - - 0.781 - - - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
32. HP1BP3 ENSGALG00000010079 33723 0.779 - - - - 0.779 - - - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
33. DDOST ENSGALG00000010073 18707 0.777 - - - - 0.777 - - - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
34. ATP5MC1 ENSGALG00000001330 37766 0.776 - - - - 0.776 - - - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
35. SRP19 ENSGALG00000000218 14207 0.775 - - - - 0.775 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
36. COMMD2 ENSGALG00000028001 18981 0.773 - - - - 0.773 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
37. SELT SELT 25524 0.773 - - - - 0.773 - - - - -
38. BRIX1 ENSGALG00000003373 27878 0.772 - - - - 0.772 - - - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
39. MRPS26 ENSGALG00000014118 27422 0.767 - - - - 0.767 - - - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
40. RPL7 ENSGALG00000035252 247865 0.765 0.765 - - - - - - - - - ribosomal protein L7 [Source:NCBI gene;Acc:420182]
41. DENR ENSGALG00000003795 30805 0.765 - - - - 0.765 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
42. DDX27 ENSGALG00000006974 18388 0.763 - - - - 0.763 - - - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
43. CDCA4 ENSGALG00000011692 10381 0.763 - - - - 0.763 - - - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
44. CALM CALM 85776 0.759 - - - - 0.759 - - - - -
45. CHMP5 ENSGALG00000013160 13347 0.759 - - - - 0.759 - - - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
46. ZDHHC6 ENSGALG00000008870 16575 0.757 - - - - 0.757 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
47. ELOVL5 ENSGALG00000016314 18163 0.757 - - - - 0.757 - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
48. TBL1X ENSGALG00000040006 28597 0.755 - - - - 0.755 - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
49. BIRC5 ENSGALG00000008713 46856 0.755 - - - - 0.755 - - - - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
50. RPS2 ENSGALG00000005490 293634 0.754 - - - - 0.754 - - - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
51. EIF1 ENSGALG00000028517 124882 0.752 0.752 - - - - - - - - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
52. LGALS1 ENSGALG00000012420 13993 0.751 - - - - 0.751 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
53. STK4 ENSGALG00000004098 11366 0.75 - - - - 0.750 - - - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
54. MRPL21 ENSGALG00000004362 20796 0.747 - - - - 0.747 - - - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
55. GSPT1 15580 0.747 - - - - 0.747 - - - - - G1 to S phase transition 1, transcript variant X1
56. RAD23B ENSGALG00000015540 10828 0.746 - - - - 0.746 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
57. HSPA5 ENSGALG00000001000 40342 0.745 - - - - 0.745 - - - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
58. UPF3B ENSGALG00000008618 12350 0.744 - - - - 0.744 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
59. THOC7 ENSGALG00000007299 38227 0.743 0.743 - - - - - - - - - THO complex 7 [Source:NCBI gene;Acc:416077]
60. VMP1 ENSGALG00000005160 12859 0.742 - - - - 0.742 - - - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
61. LGMN ENSGALG00000010811 7401 0.741 - - - - 0.741 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
62. CCDC132 CCDC132 2632 0.74 - - - - 0.740 - - - - -
63. PSMD3 ENSGALG00000033162 25615 0.739 - - - - 0.739 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
64. PRCC ENSGALG00000040696 9346 0.739 - - - - 0.739 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
65. NDUFA11 ENSGALG00000021692 75804 0.739 0.739 - - - - - - - - - NADH:ubiquinone oxidoreductase subunit A11
66. TUBB2C TUBB2C 44249 0.739 0.739 - - - - - - - - -
67. CENPP ENSGALG00000004687 6707 0.739 - - - - 0.739 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
68. SSR1 ENSGALG00000012798 62626 0.738 0.738 - - - - - - - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
69. ACTG1_1 ENSGALG00000001381 64662 0.738 - - - - 0.738 - - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
70. SRP14 ENSGALG00000009592 17828 0.737 0.737 - - - - - - - - - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
71. SPRED1 ENSGALG00000028203 6520 0.736 - - - - 0.736 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
72. ACAT2 ENSGALG00000011659 12825 0.736 - - - - 0.736 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
73. TM9SF3 ENSGALG00000005534 15290 0.735 - - - - 0.735 - - - - - transmembrane 9 superfamily member 3
74. MYBL2 ENSGALG00000003503 15875 0.735 - - - - 0.735 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
75. RPL22 ENSGALG00000000719 74238 0.735 - - - - 0.735 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
76. SRGAP1 ENSGALG00000009825 6753 0.734 - - - - 0.734 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
77. PARVB ENSGALG00000014201 27559 0.733 - - - - - - 0.733 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
78. DLD ENSGALG00000007931 11011 0.732 - - - - 0.732 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
79. NUP88 ENSGALG00000032280 9847 0.732 - - - - 0.732 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
80. EIF3B ENSGALG00000040999 49971 0.732 - - - - 0.732 - - - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
81. EEF1D 153795 0.732 - - - - 0.732 - - - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
82. SLMO2 SLMO2 9207 0.731 - - - - 0.731 - - - - -
83. YWHAH ENSGALG00000006743 29828 0.731 - - - - 0.731 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
84. Mar-05 Mar-05 6330 0.731 - - - - 0.731 - - - - -
85. RPL36AL ENSGALG00000004952 205590 0.73 0.730 - - - - - - - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
86. PSMG3 ENSGALG00000004203 11240 0.729 - - - - 0.729 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
87. KIF2A ENSGALG00000014737 16391 0.729 - - - - 0.729 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
88. RPS15A ENSGALG00000006771 287037 0.728 0.728 - - - - - - - - - ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
89. USMG5 ENSGALG00000034645 33263 0.728 - - - - 0.728 - - - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
90. PSMA2 ENSGALG00000039387 23620 0.728 0.728 - - - - - - - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
91. NDUFS4 ENSGALG00000028026 25876 0.728 - - - - 0.728 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
92. CSNK2A1 ENSGALG00000006197 41409 0.727 - - - - 0.727 - - - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
93. RBF RBF 49711 0.727 0.727 - - - - - - - - -
94. VMA21 ENSGALG00000009065 6432 0.726 - - - - 0.726 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
95. UTP6 ENSGALG00000003260 4909 0.722 - - - - 0.722 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
96. ARGLU1 ENSGALG00000016855 25633 0.722 - - - - 0.722 - - - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
97. NEK6 ENSGALG00000001118 20333 0.721 - - - - 0.721 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
98. RNF4 ENSGALG00000015668 15780 0.721 - - - - 0.721 - - - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
99. SMARCB1 ENSGALG00000005983 20548 0.721 - - - - 0.721 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
100. MED21 ENSGALG00000027435 5766 0.721 - - - - 0.721 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]

There are 46 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA