Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TBX3

Gene Name Gene ID Reads Annotation
TBX3 ENSGALG00000036043 2888 T-box 3 [Source:NCBI gene;Acc:374202]











Genes with expression patterns similar to TBX3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TBX3 ENSGALG00000036043 2888 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 T-box 3 [Source:NCBI gene;Acc:374202]
2. CHALK5 CHALK5 1351 1.692 - - 0.779 - - - - 0.913 - -
3. SLC41A1 ENSGALG00000000721 1604 1.681 - - 0.776 - - - - 0.905 - - solute carrier family 41 member 1 [Source:HGNC Symbol;Acc:HGNC:19429]
4. CLUH ENSGALG00000005854 2100 1.671 - - - - - - - 0.898 - 0.773 clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
5. CCDC51 ENSGALG00000006465 1845 1.666 - - - - - - - 0.920 - 0.746 coiled-coil domain containing 51, transcript variant X1
6. LAMP2 ENSGALG00000008572 198 1.659 - - - - - - - 0.902 - 0.757 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
7. SALL1 ENSGALG00000039238 3740 1.644 - 0.716 - - - - - 0.928 - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
8. COL5A2 ENSGALG00000031112 18358 1.624 - - - - - - 0.804 - - 0.820 collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
9. DARS2 ENSGALG00000023749 2386 1.616 - - 0.763 - - - - 0.853 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
10. AKR1B1L ENSGALG00000003466 6237 1.615 - - - - - - 0.764 0.851 - - aldo-keto reductase family 1 member E2 [Source:NCBI gene;Acc:418171]
11. PRPSAP1 ENSGALG00000021539 3517 1.588 - - 0.704 - - - - 0.884 - - phosphoribosyl pyrophosphate synthetase associated protein 1 [Source:HGNC Symbol;Acc:HGNC:9466]
12. ELL ENSGALG00000033513 6536 1.58 - - - - - - 0.716 0.864 - - elongation factor for RNA polymerase II [Source:NCBI gene;Acc:420124]
13. TMLHE ENSGALG00000007443 3619 1.567 - - 0.816 - - - - - - 0.751 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
14. SLC35B1 ENSGALG00000035057 10683 1.567 - - - - - - - 0.742 - 0.825 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
15. LGALS3 ENSGALG00000012173 3306 1.561 - 0.755 - - - - - 0.806 - - galectin 3 [Source:NCBI gene;Acc:373917]
16. F2RL2 ENSGALG00000023379 1049 1.557 - - - - - - - 0.753 - 0.804 coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]
17. C6orf211 C6orf211 2644 1.55 - - 0.729 - - - - 0.821 - -
18. ALDH7A1 ENSGALG00000008229 5891 1.538 - - - - - - - 0.827 - 0.711 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
19. WHSC1 1712 1.536 - - 0.758 - - - - - - 0.778 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
20. RBBP8 ENSGALG00000014982 3255 1.534 - - 0.751 - - - - 0.783 - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
21. BTG1L ENSGALG00000004676 2293 1.534 - - 0.768 - - - - - - 0.766 protein BTG1-like
22. CUL5 ENSGALG00000017165 2480 1.534 - - 0.747 - - - - - - 0.787 cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
23. SPCS3 ENSGALG00000010839 19106 1.522 - - 0.740 - - - 0.782 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
24. CNTRL ENSGALG00000001513 1773 1.505 - - 0.723 - - - - - - 0.782 centriolin [Source:NCBI gene;Acc:417121]
25. NRSN1 ENSGALG00000037811 11424 1.5 - - - - - - 0.730 - - 0.770 neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
26. TMED7 ENSGALG00000028484 21008 1.493 - - - - - - 0.713 - - 0.780 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
27. NAA30 ENSGALG00000012098 4681 1.49 - - - - - - 0.750 - - 0.740 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
28. FNBP1L ENSGALG00000005850 9219 1.486 - - - - - - 0.714 - - 0.772 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
29. PTX3 ENSGALG00000028284 2984 1.485 - - - - - - 0.721 - - 0.764 pentraxin 3 [Source:NCBI gene;Acc:548626]
30. TSC22D1 ENSGALG00000016971 6062 1.479 - - 0.715 - - - - 0.764 - - TSC22 domain family member 1 [Source:NCBI gene;Acc:396005]
31. THOP1 ENSGALG00000041934 10122 1.467 - - - - - - 0.702 0.765 - - thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:11793]
32. SOSTDC1 ENSGALG00000036836 1081 1.466 - 0.736 - - - - - - 0.730 - sclerostin domain containing 1 [Source:NCBI gene;Acc:378800]
33. ARPC1B ENSGALG00000032588 2407 1.466 - - - - - - 0.720 - - 0.746 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
34. HDAC2 ENSGALG00000014991 23458 1.466 - - 0.708 - - - - - - 0.758 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
35. GXYLT1 ENSGALG00000009532 5682 1.45 - - - - - - 0.703 - - 0.747 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
36. LYPLA2 ENSGALG00000004002 3939 1.444 - - 0.701 - - - 0.743 - - - lysophospholipase II [Source:NCBI gene;Acc:419685]
37. GID8 ENSGALG00000005700 3992 1.441 - - 0.719 - - - - - - 0.722 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
38. PRPF38B ENSGALG00000001972 2009 1.428 - - 0.701 - - - - - - 0.727 pre-mRNA processing factor 38B
39. PTCD3 ENSGALG00000015773 3059 1.418 - - 0.715 - - - 0.703 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
40. ECI2 ENSGALG00000012809 3692 0.937 - - - - - - - 0.937 - - enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
41. C4BPA ENSGALG00000001175 4278 0.937 - - - - - - - 0.937 - - complement component 4 binding protein, alpha [Source:NCBI gene;Acc:395384]
42. CENPC1 CENPC1 3324 0.934 - - - - - - - 0.934 - -
43. ISCA2 ENSGALG00000020417 1130 0.93 - - - - - - - 0.930 - - iron-sulfur cluster assembly 2 [Source:HGNC Symbol;Acc:HGNC:19857]
44. HOXD12 ENSGALG00000009274 637 0.928 - 0.928 - - - - - - - - homeobox D12 [Source:NCBI gene;Acc:396178]
45. B3GNT7 ENSGALG00000007701 929 0.926 - - - - - - - 0.926 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:18811]
46. HSDL1 ENSGALG00000003273 1108 0.923 - - - - - - - 0.923 - - hydroxysteroid dehydrogenase like 1 [Source:NCBI gene;Acc:415703]
47. SOX5 ENSGALG00000032768 998 0.922 - - - - - - - 0.922 - - SRY-box 5 [Source:NCBI gene;Acc:418195]
48. TMEM214 ENSGALG00000022850 7943 0.921 - - - - - - - 0.921 - - transmembrane protein 214 [Source:HGNC Symbol;Acc:HGNC:25983]
49. PHLPP2 ENSGALG00000000875 561 0.921 - - - - - - - 0.921 - - PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]
50. SLC25A48 ENSGALG00000006341 2606 0.921 - - - - - - - 0.921 - - solute carrier family 25 member 48 [Source:HGNC Symbol;Acc:HGNC:30451]
51. MAPKKK3L ENSGALG00000005884 1011 0.921 - - - - - - - 0.921 - - mitogen-activated protein kinase kinase kinase 3-like [Source:NCBI gene;Acc:420419]
52. HYOU1 ENSGALG00000007659 3555 0.921 - - - - - - - 0.921 - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
53. FAM204A ENSGALG00000009307 3690 0.92 - - - - - - - 0.920 - - family with sequence similarity 204 member A [Source:HGNC Symbol;Acc:HGNC:25794]
54. CHKA ENSGALG00000036754 5077 0.919 - - - - - - - 0.919 - - choline kinase alpha [Source:HGNC Symbol;Acc:HGNC:1937]
55. TES ENSGALG00000031934 5908 0.918 - - - - - - - 0.918 - - testin LIM domain protein [Source:NCBI gene;Acc:395332]
56. LDHA ENSGALG00000006300 4796 0.916 - - - - - - - 0.916 - - lactate dehydrogenase A [Source:NCBI gene;Acc:396221]
57. DNAJC11 ENSGALG00000000627 769 0.915 - - - - - - - 0.915 - - DnaJ heat shock protein family (Hsp40) member C11 [Source:HGNC Symbol;Acc:HGNC:25570]
58. CHUK ENSGALG00000003289 5698 0.914 - - - - - - - 0.914 - - conserved helix-loop-helix ubiquitous kinase [Source:NCBI gene;Acc:423669]
59. PLD1 ENSGALG00000009252 2331 0.913 - - - - - - - 0.913 - - phospholipase D1, transcript variant X5
60. SENP5 ENSGALG00000008545 909 0.913 - - - - - - - 0.913 - - SUMO specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:28407]
61. GPX7 ENSGALG00000010633 7224 0.913 - - - - - - - 0.913 - - glutathione peroxidase 7 [Source:NCBI gene;Acc:424643]
62. TOX ENSGALG00000039102 1434 0.911 - - - - - - - 0.911 - - thymocyte selection associated high mobility group box [Source:NCBI gene;Acc:421138]
63. KIAA0930 ENSGALG00000014226 1243 0.911 - - - - - - - 0.911 - - KIAA0930 [Source:HGNC Symbol;Acc:HGNC:1314]
64. DSG2 ENSGALG00000015142 67 0.911 - - - - - - - 0.911 - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
65. HSPA13 ENSGALG00000019201 712 0.911 - - - - - - - 0.911 - - heat shock protein family A (Hsp70) member 13 [Source:NCBI gene;Acc:418469]
66. TRMT61B ENSGALG00000008979 615 0.91 - - - - - - - 0.910 - - tRNA methyltransferase 61B [Source:HGNC Symbol;Acc:HGNC:26070]
67. ABCB10 ENSGALG00000011096 1407 0.91 - - - - - - - 0.910 - - ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
68. YARS2 503 0.909 - - - - - - - 0.909 - - tyrosyl-tRNA synthetase 2
69. LIPG ENSGALG00000043734 2490 0.909 - - - - - - - 0.909 - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
70. ZBTB26 ENSGALG00000042762 1920 0.909 - - - - - - - 0.909 - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
71. HDAC4 ENSGALG00000004288 2124 0.908 - - - - - - - 0.908 - - histone deacetylase 4 [Source:NCBI gene;Acc:374207]
72. II II 929 0.907 - - - - - - - 0.907 - -
73. MDM4 ENSGALG00000000636 91 0.907 - - - - - - - 0.907 - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
74. ORAI1 ENSGALG00000004240 515 0.907 - - - - - - - 0.907 - - ORAI calcium release-activated calcium modulator 1 [Source:NCBI gene;Acc:416845]
75. SLC30A2 ENSGALG00000010375 44 0.907 - - - - - - - 0.907 - - solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
76. TRIM62 ENSGALG00000028437 5124 0.907 - - - - - - - 0.907 - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
77. TMEM200A ENSGALG00000002282 77 0.906 - - - - - - - 0.906 - - transmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]
78. RIN3 ENSGALG00000010806 729 0.906 - - - - - - - 0.906 - - Ras and Rab interactor 3 [Source:HGNC Symbol;Acc:HGNC:18751]
79. MPZL3 ENSGALG00000021271 1857 0.906 - - - - - - - 0.906 - - myelin protein zero like 3 [Source:NCBI gene;Acc:419778]
80. LPIN1 ENSGALG00000016456 1044 0.906 - - - - - - - 0.906 - - lipin 1 [Source:HGNC Symbol;Acc:HGNC:13345]
81. TCEANC ENSGALG00000016581 948 0.906 - - - - - - - 0.906 - - transcription elongation factor A N-terminal and central domain containing [Source:HGNC Symbol;Acc:HGNC:28277]
82. EX-FABP EX-FABP 516 0.906 - - - - - - - 0.906 - -
83. PYGL ENSGALG00000012365 4691 0.906 - - - - - - - 0.906 - - glycogen phosphorylase L [Source:NCBI gene;Acc:378909]
84. CWH43 ENSGALG00000041921 68 0.905 - - - - - - - 0.905 - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
85. TFG ENSGALG00000015299 849 0.905 - - - - - - - 0.905 - - TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
86. GJB6 ENSGALG00000017136 500 0.905 - - - - - - - 0.905 - - gap junction protein beta 6 [Source:NCBI gene;Acc:395771]
87. SEMA3E ENSGALG00000038225 677 0.905 - - - - - - - 0.905 - - semaphorin 3E [Source:NCBI gene;Acc:374089]
88. VPS37A ENSGALG00000013646 55 0.905 - - - - - - - 0.905 - - VPS37A, ESCRT-I subunit [Source:HGNC Symbol;Acc:HGNC:24928]
89. AMER1 ENSGALG00000007599 994 0.904 - - - - - - - 0.904 - - APC membrane recruitment protein 1 [Source:HGNC Symbol;Acc:HGNC:26837]
90. RASGEF1A ENSGALG00000002525 918 0.904 - - - - - - - 0.904 - - RasGEF domain family member 1A [Source:HGNC Symbol;Acc:HGNC:24246]
91. MSRB1 ENSGALG00000005414 4197 0.904 - - - - - - - 0.904 - - methionine sulfoxide reductase B1 [Source:NCBI gene;Acc:416540]
92. IKZF5 ENSGALG00000032289 993 0.904 - - - - - - - 0.904 - - IKAROS family zinc finger 5 [Source:NCBI gene;Acc:430882]
93. GAA ENSGALG00000038853 158 0.904 - - - - - - - 0.904 - - glucosidase alpha, acid [Source:HGNC Symbol;Acc:HGNC:4065]
94. FUBP1 ENSGALG00000008939 2850 0.903 - - - - - - - 0.903 - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
95. NXT2 ENSGALG00000008092 2477 0.903 - - - - - - - 0.903 - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
96. ENSGALG00000001854 ENSGALG00000001854 965 0.903 - - - - - - - 0.903 - -
97. CASP7 ENSGALG00000008933 506 0.902 - - - - - - - 0.902 - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
98. PAMR1 ENSGALG00000007886 928 0.902 - - - - - - - 0.902 - - peptidase domain containing associated with muscle regeneration 1 [Source:HGNC Symbol;Acc:HGNC:24554]
99. TCIRG1 ENSGALG00000036069 1117 0.902 - - - - - - - 0.902 - - T-cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [Source:NCBI gene;Acc:395472]
100. GSTA GSTA 3130 0.901 - - - - - - - 0.901 - -

There are 755 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA