Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TARDBP

Gene Name Gene ID Reads Annotation
TARDBP ENSGALG00000002906 24748 TAR DNA binding protein [Source:NCBI gene;Acc:419453]











Genes with expression patterns similar to TARDBP

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TARDBP ENSGALG00000002906 24748 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TAR DNA binding protein [Source:NCBI gene;Acc:419453]
2. BAG5 ENSGALG00000031062 4498 1.55 - - 0.729 - - - 0.821 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
3. TAF3 ENSGALG00000006731 15569 1.504 - - - - - - 0.801 0.703 - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
4. NHP2L1 NHP2L1 12124 1.484 - - 0.701 - - - 0.783 - - -
5. SHMT1 ENSGALG00000005046 1430 1.482 - - 0.710 - - - 0.772 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
6. NFI1 NFI1 6210 1.475 - - 0.718 - - - 0.757 - - -
7. SENP6 ENSGALG00000015901 8013 1.45 - - 0.722 - - - 0.728 - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
8. ACTR8 ENSGALG00000005385 3647 1.442 - - 0.721 - - - 0.721 - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
9. AMBRA1 ENSGALG00000008358 2865 1.437 - - 0.721 - - - 0.716 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
10. RFK ENSGALG00000033558 1364 1.434 - - 0.713 - - - 0.721 - - - riboflavin kinase, transcript variant X3
11. DDX19B ENSGALG00000039967 49600 0.887 - - - - - - 0.887 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
12. API5 ENSGALG00000037968 18265 0.884 - - - - - - 0.884 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
13. METAP2 ENSGALG00000011377 16311 0.883 - - - - - - 0.883 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
14. SOX11 ENSGALG00000016397 12144 0.881 - - - - - - 0.881 - - - SRY-box 11 [Source:NCBI gene;Acc:396104]
15. PTGFRN ENSGALG00000015464 14584 0.88 - - - - - - 0.880 - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
16. ATG3 ENSGALG00000015204 11277 0.873 - - - - - - 0.873 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
17. ILF2 ENSGALG00000011570 23050 0.87 - - - - - - 0.870 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
18. PSMB2 ENSGALG00000026421 51885 0.866 - - - - - - 0.866 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
19. CHMP6 ENSGALG00000026428 18026 0.864 - - - - - - 0.864 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
20. NEK6 ENSGALG00000001118 20333 0.863 - - - - - - 0.863 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
21. MPHOSPH10 ENSGALG00000003906 7029 0.861 - - - - - - - 0.861 - - M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]
22. TMEM70 ENSGALG00000033568 10720 0.861 - - - - - - 0.861 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
23. UBE2D1 ENSGALG00000021213 5876 0.859 - - - - - - 0.859 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
24. RUVBL1 ENSGALG00000005931 9379 0.856 - - - - - - 0.856 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
25. GNAI2 ENSGALG00000035645 9535 0.855 - - - - - - 0.855 - - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
26. CSE1L ENSGALG00000004707 20653 0.854 - - - - - - 0.854 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
27. BRP44 BRP44 17093 0.854 - - - - - - 0.854 - - -
28. RAB10 ENSGALG00000016535 5272 0.852 - - - - - - 0.852 - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
29. UBR2 ENSGALG00000009906 7717 0.852 - - - - - - 0.852 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
30. ENSGALG00000017396 ENSGALG00000017396 9028 0.851 - - - - - - 0.851 - - -
31. EPFIP1L ENSGALG00000007683 18050 0.851 - - - - - - 0.851 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
32. CDC40 ENSGALG00000015061 6118 0.849 - - - - - - 0.849 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
33. SPEN ENSGALG00000036932 9688 0.849 - - - - - - 0.849 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
34. RNF7 ENSGALG00000021117 13110 0.848 - - - - - - - 0.848 - - ring finger protein 7 [Source:NCBI gene;Acc:424781]
35. ATP2B1 ENSGALG00000030550 15123 0.847 - - - - - - 0.847 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
36. PPP1R2 ENSGALG00000029789 11594 0.847 - - - - - - 0.847 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
37. YWHAZ ENSGALG00000031387 84985 0.844 - - - - - - 0.844 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
38. PARP1 ENSGALG00000009228 39433 0.842 - - - - - - 0.842 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
39. PABPC1 ENSGALG00000030280 23934 0.841 - - - - - - 0.841 - - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
40. C11H16ORF80 C11H16ORF80 18673 0.84 - - - - - - 0.840 - - -
41. XRN2 ENSGALG00000008372 22164 0.84 - - - - - - 0.840 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
42. TSC22D2 ENSGALG00000027591 6594 0.84 - - - - - - 0.840 - - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
43. TOR1AIP1 ENSGALG00000029238 5843 0.839 - - - - - - 0.839 - - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
44. C1H12ORF23 C1H12ORF23 13234 0.838 - - - - - - 0.838 - - -
45. TET1 ENSGALG00000031604 13002 0.838 - - - - - - 0.838 - - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
46. CTBP1 ENSGALG00000039942 9383 0.837 - - - - - - 0.837 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
47. GLO1 ENSGALG00000010127 31662 0.835 - - - - - - 0.835 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
48. MED17 ENSGALG00000017218 5821 0.835 - - - - - - 0.835 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
49. CZH9ORF80 CZH9ORF80 12760 0.834 - - - - - - 0.834 - - -
50. DKC1 ENSGALG00000005054 30350 0.834 - - - - - - 0.834 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
51. WDR45B ENSGALG00000001563 5870 0.834 - - - - - - 0.834 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
52. SMC4 ENSGALG00000009553 15715 0.833 - - - - - - 0.833 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
53. RABGGTB ENSGALG00000011388 11654 0.833 - - - - - - 0.833 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
54. ACTR2 ENSGALG00000008779 17812 0.833 - - - - - - 0.833 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
55. DGCR2 ENSGALG00000005891 8405 0.833 - - - - - - 0.833 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
56. MED27 ENSGALG00000003683 6808 0.832 - - - - - - 0.832 - - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
57. EBNA1BP2 ENSGALG00000009045 17453 0.832 - - - - - - 0.832 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
58. GLRX3 ENSGALG00000010464 22578 0.832 - - - - - - 0.832 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
59. MRPL20 ENSGALG00000001542 28764 0.832 - - - - - - 0.832 - - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
60. HSPA4 ENSGALG00000040882 20966 0.831 - - - - - - 0.831 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
61. CUL2 ENSGALG00000007095 9493 0.83 - - - - - - 0.830 - - - cullin 2 [Source:NCBI gene;Acc:420467]
62. C1QBP ENSGALG00000001654 34814 0.829 - - - - - - 0.829 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
63. MBD3 ENSGALG00000001101 37265 0.829 - - - - - - 0.829 - - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
64. DERL1 ENSGALG00000033950 15074 0.827 - - - - - - 0.827 - - - derlin 1 [Source:NCBI gene;Acc:420350]
65. HMGB2 ENSGALG00000010745 89235 0.827 - - - - - - 0.827 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
66. RPS28 ENSGALG00000024398 244056 0.827 - - - - - - 0.827 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
67. SSR3 ENSGALG00000028683 24334 0.826 - - - - - - 0.826 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
68. MAP3K7 ENSGALG00000015596 15164 0.826 - - - - - - 0.826 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
69. IGF2BP2 ENSGALG00000033195 11421 0.824 - - - - - - 0.824 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
70. TXNDC17 ENSGALG00000027950 45004 0.823 - - - - - - 0.823 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
71. CMPK CMPK 9569 0.822 - - - - - - 0.822 - - -
72. TMTC2 ENSGALG00000010975 7040 0.822 - - - - - - 0.822 - - - transmembrane and tetratricopeptide repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:25440]
73. GLI3 ENSGALG00000040266 9981 0.822 - - - - - - 0.822 - - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
74. C17H9ORF16 C17H9ORF16 7908 0.822 - - - - - - 0.822 - - -
75. PSMD12 ENSGALG00000026225 17473 0.821 - - - - - - 0.821 - - - proteasome 26S subunit, non-ATPase 12 [Source:NCBI gene;Acc:417425]
76. TMED7 ENSGALG00000028484 21008 0.821 - - - - - - 0.821 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
77. DLGAP4 ENSGALG00000001046 6872 0.821 - - - - - - 0.821 - - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
78. gga-mir-7476 gga-mir-7476 20209 0.821 - - - - - - 0.821 - - -
79. PAXIP1 ENSGALG00000036064 3120 0.82 - - - - - - 0.820 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
80. WDR43 ENSGALG00000032529 12235 0.82 - - - - - - 0.820 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
81. RSL1D1 ENSGALG00000033690 13638 0.819 - - - - - - 0.819 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
82. EGLN1 ENSGALG00000041422 11032 0.818 - - - - - - 0.818 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
83. BET1L ENSGALG00000004172 5305 0.818 - - - - - - 0.818 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
84. MTMR8 ENSGALG00000007590 6022 0.818 - - - - - - 0.818 - - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
85. LSM5 ENSGALG00000041625 22307 0.817 - - - - - - 0.817 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
86. TMEM30A ENSGALG00000015904 8533 0.817 - - - - - - 0.817 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
87. TMEM184C ENSGALG00000010019 7856 0.816 - - - - - - 0.816 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
88. TMX3 ENSGALG00000013757 6387 0.816 - - - - - - 0.816 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
89. PSMC3 ENSGALG00000008108 22922 0.815 - - - - - - 0.815 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
90. POLR1B ENSGALG00000032273 3845 0.815 - - - - - - 0.815 - - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
91. TIA1 ENSGALG00000013879 16330 0.815 - - - - - - 0.815 - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
92. TMEM167A ENSGALG00000027332 13862 0.815 - - - - - - 0.815 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
93. RANGAP1 ENSGALG00000011966 20170 0.815 - - - - - - 0.815 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
94. RAB6A ENSGALG00000017320 10569 0.814 - - - - - - 0.814 - - - RAB6A, member RAS oncogene family [Source:NCBI gene;Acc:419063]
95. CDK5RAP1 ENSGALG00000006738 2628 0.814 - - - - - - 0.814 - - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
96. DPYSL2 ENSGALG00000000227 9668 0.814 - - - - - - 0.814 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
97. EIF4A2 ENSGALG00000008684 58507 0.813 - - - - - - 0.813 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
98. CCNG2 ENSGALG00000010347 9122 0.813 - - - - - - 0.813 - - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
99. BSG ENSGALG00000001328 37947 0.813 - - - - - - 0.813 - - - basigin (Ok blood group) [Source:NCBI gene;Acc:770363]
100. UTP11L UTP11L 11927 0.813 - - - - - - 0.813 - - -

There are 816 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA