Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TAF3

Gene Name Gene ID Reads Annotation
TAF3 ENSGALG00000006731 15569 TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]











Genes with expression patterns similar to TAF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TAF3 ENSGALG00000006731 15569 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
2. LMAN2 ENSGALG00000033232 11740 1.803 - - - - 0.962 - 0.841 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
3. TM9SF3 ENSGALG00000005534 15290 1.774 - - - - 0.933 - - 0.841 - - transmembrane 9 superfamily member 3
4. HARS ENSGALG00000035080 11602 1.758 - - - - 0.959 - 0.799 - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
5. NEK6 ENSGALG00000001118 20333 1.73 - - - - 0.942 - 0.788 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
6. SPEN ENSGALG00000036932 9688 1.73 - - - - 0.948 - 0.782 - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
7. DLD ENSGALG00000007931 11011 1.712 - - - - 0.962 - 0.750 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
8. C4H4ORF52 C4H4ORF52 8116 1.701 - - - - - - 0.788 0.913 - -
9. PSMD3 ENSGALG00000033162 25615 1.7 - - - - 0.961 - 0.739 - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
10. UTP6 ENSGALG00000003260 4909 1.698 - - - - 0.953 - 0.745 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
11. KIF11 ENSGALG00000030597 5528 1.697 - - - - 0.969 - 0.728 - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
12. CHMP5 ENSGALG00000013160 13347 1.695 - - - - 0.934 - 0.761 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
13. FUNDC2 ENSGALG00000029585 9334 1.694 - - - - 0.976 - 0.718 - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
14. SKP2 ENSGALG00000003547 14637 1.687 - - - - - - 0.824 0.863 - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
15. GABARAPL2 ENSGALG00000003208 9195 1.684 - - - - 0.912 - 0.772 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
16. ESF1 ENSGALG00000034768 8610 1.679 - - - - - - 0.757 0.922 - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]
17. CDKN1B ENSGALG00000022980 4606 1.668 - - - - 0.966 - 0.702 - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
18. VMA21 ENSGALG00000009065 6432 1.662 - - - - 0.949 - 0.713 - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
19. EIF2B1 ENSGALG00000003259 9491 1.657 - - - - - - 0.712 0.945 - - eukaryotic translation initiation factor 2B subunit alpha [Source:HGNC Symbol;Acc:HGNC:3257]
20. CENPP ENSGALG00000004687 6707 1.653 - - - - 0.930 - 0.723 - - - centromere protein P [Source:NCBI gene;Acc:415952]
21. CTNND2 ENSGALG00000013001 11217 1.65 - - - - - - 0.758 0.892 - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
22. BAG2 ENSGALG00000026605 3898 1.648 - - - - - - 0.717 0.931 - - BCL2 associated athanogene 2
23. UMPS ENSGALG00000011770 11331 1.63 - - - - 0.882 - 0.748 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
24. TTC4 10377 1.623 - - - - - - 0.747 0.876 - - tetratricopeptide repeat domain 4
25. LSM5 ENSGALG00000041625 22307 1.612 - - - - 0.835 - 0.777 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
26. CEP78 ENSGALG00000015179 5227 1.6 - - - - 0.897 - 0.703 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
27. EIF3B ENSGALG00000040999 49971 1.594 - - - - 0.833 - 0.761 - - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
28. ASUN ASUN 17129 1.568 - - - - - - 0.808 0.760 - -
29. DDX27 ENSGALG00000006974 18388 1.565 - - - - 0.848 - 0.717 - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
30. ACTR2 ENSGALG00000008779 17812 1.553 - - - - - - 0.794 - - 0.759 ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
31. GOLGA7 ENSGALG00000003483 26525 1.534 - - - - - - 0.789 0.745 - - golgin A7 [Source:NCBI gene;Acc:426787]
32. GMPPA ENSGALG00000002417 10383 1.514 - - - - - - 0.733 0.781 - - GDP-mannose pyrophosphorylase A, transcript variant X2
33. TARDBP ENSGALG00000002906 24748 1.504 - - - - - - 0.801 0.703 - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
34. TRIP13 ENSGALG00000033834 6590 1.502 - - - - - - 0.733 0.769 - - thyroid hormone receptor interactor 13 [Source:NCBI gene;Acc:420798]
35. TRAPPC2 ENSGALG00000016578 8749 1.45 - - - - - - 0.716 0.734 - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
36. C9orf85 ENSGALG00000026001 4110 0.977 - - - - 0.977 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
37. PSMG3 ENSGALG00000004203 11240 0.975 - - - - 0.975 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
38. PHTF1 ENSGALG00000001845 3276 0.973 - - - - 0.973 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
39. LZIC ENSGALG00000002616 9052 0.972 - - - - 0.972 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
40. TIMMDC1 ENSGALG00000024480 9337 0.971 - - - - 0.971 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
41. DLL1 ENSGALG00000011182 1613 0.97 - - - - 0.970 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
42. PRDM4 ENSGALG00000012619 876 0.97 - - - - 0.970 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
43. BAHD1 ENSGALG00000033675 1779 0.97 - - - - 0.970 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
44. BRF1 ENSGALG00000011705 3406 0.969 - - - - 0.969 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
45. ANKRD9 ENSGALG00000011376 525 0.969 - - - - 0.969 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
46. PBRM1 ENSGALG00000037455 6450 0.968 - - - - 0.968 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
47. SMG7 ENSGALG00000004667 707 0.968 - - - - 0.968 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
48. PTK2B ENSGALG00000016564 406 0.968 - - - - 0.968 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
49. RALGDS ENSGALG00000003412 4478 0.968 - - - - 0.968 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
50. SYNE1 ENSGALG00000013505 2324 0.968 - - - - 0.968 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
51. RAMP3 ENSGALG00000037246 1187 0.967 - - - - 0.967 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
52. ETS1 ENSGALG00000001143 7284 0.967 - - - - 0.967 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
53. PREP2 PREP2 238 0.967 - - - - 0.967 - - - - -
54. SDCBP ENSGALG00000015436 1228 0.966 - - - - 0.966 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
55. MED8 ENSGALG00000009993 3095 0.966 - - - - 0.966 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
56. SAP30 ENSGALG00000036252 2032 0.966 - - - - 0.966 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
57. TMF1 ENSGALG00000013408 3344 0.966 - - - - 0.966 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
58. IARS2 ENSGALG00000009566 4599 0.966 - - - - 0.966 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
59. ASAP2 ENSGALG00000016419 1393 0.966 - - - - 0.966 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
60. ZC3H6 ENSGALG00000008269 10353 0.965 - - - - 0.965 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
61. RAD54B ENSGALG00000043597 1699 0.965 - - - - 0.965 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
62. YARS ENSGALG00000003563 11093 0.965 - - - - 0.965 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
63. MYBL2 ENSGALG00000003503 15875 0.965 - - - - 0.965 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
64. NDUFV1 ENSGALG00000042809 6222 0.965 - - - - 0.965 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
65. MRPL16 ENSGALG00000029419 8033 0.965 - - - - 0.965 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
66. MED21 ENSGALG00000027435 5766 0.965 - - - - 0.965 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
67. ENSGALG00000006569 ENSGALG00000006569 2169 0.965 - - - - 0.965 - - - - -
68. LGMN ENSGALG00000010811 7401 0.965 - - - - 0.965 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
69. RBM6 ENSGALG00000035578 1690 0.964 - - - - 0.964 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
70. RBM34 ENSGALG00000029915 5618 0.964 - - - - 0.964 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
71. SPRED1 ENSGALG00000028203 6520 0.964 - - - - 0.964 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
72. GTF2H1 ENSGALG00000042340 1553 0.964 - - - - 0.964 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
73. FNDC5 ENSGALG00000003567 3328 0.964 - - - - 0.964 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
74. PITHD1 ENSGALG00000003986 11470 0.964 - - - - 0.964 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
75. UPF3B ENSGALG00000008618 12350 0.964 - - - - 0.964 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
76. STARD3NL ENSGALG00000033038 4851 0.962 - - - - 0.962 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
77. SFXN5 ENSGALG00000016094 2678 0.962 - - - - 0.962 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
78. HSF2 ENSGALG00000038420 5259 0.962 - - - - 0.962 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
79. SNX14 ENSGALG00000015831 2554 0.962 - - - - 0.962 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
80. WDR92 ENSGALG00000008760 3934 0.962 - - - - 0.962 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
81. SRGAP1 ENSGALG00000009825 6753 0.961 - - - - 0.961 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
82. DGKZ ENSGALG00000008380 5389 0.961 - - - - 0.961 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
83. CDH3 5050 0.961 - - - - 0.961 - - - - - cadherin 3
84. LOC426385 ENSGALG00000026301 2703 0.96 - - - - 0.960 - - - - - serine/threonine kinase 35-like, transcript variant X2
85. ENSGALG00000027854 ENSGALG00000027854 5007 0.96 - - - - 0.960 - - - - -
86. COQ5 ENSGALG00000007185 5614 0.959 - - - - 0.959 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
87. EDNRA ENSGALG00000010013 2472 0.959 - - - - 0.959 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
88. TSPO2 ENSGALG00000003212 5141 0.958 - - - - 0.958 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
89. PRCC ENSGALG00000040696 9346 0.958 - - - - 0.958 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
90. WNK2 ENSGALG00000038850 4712 0.958 - - - - 0.958 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
91. MARC1 ENSGALG00000009453 5675 0.956 - - - - 0.956 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
92. DENR ENSGALG00000003795 30805 0.955 - - - - 0.955 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
93. SLC30A4 ENSGALG00000005703 5696 0.955 - - - - 0.955 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
94. CCDC132 CCDC132 2632 0.954 - - - - 0.954 - - - - -
95. ZYX ENSGALG00000014688 8686 0.951 - - - - 0.951 - - - - - zyxin [Source:NCBI gene;Acc:418300]
96. SLMO2 SLMO2 9207 0.951 - - - - 0.951 - - - - -
97. GATC ENSGALG00000007195 8610 0.951 - - - - 0.951 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
98. SREK1 ENSGALG00000014775 13961 0.951 - - - - 0.951 - - - - - splicing regulatory glutamic acid and lysine rich protein 1, transcript variant X3
99. ACAT2 ENSGALG00000011659 12825 0.951 - - - - 0.951 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
100. NUP88 ENSGALG00000032280 9847 0.95 - - - - 0.950 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]

There are 743 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA