Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Syncrip

Gene Name Gene ID Reads Annotation
Syncrip ENSMUSG00000032423 12993 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]







Genes with expression patterns similar to Syncrip

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Syncrip ENSMUSG00000032423 12993 6 1.000 1.000 1.000 1.000 1.000 1.000 synaptotagmin binding, cytoplasmic RNA interacting protein [Source:MGI Symbol;Acc:MGI:1891690]
2. Mta2 ENSMUSG00000071646 5360 1.529 0.710 0.819 - - - - metastasis-associated gene family, member 2 [Source:MGI Symbol;Acc:MGI:1346340]
3. Smad4 ENSMUSG00000024515 3795 1.51 0.716 0.794 - - - - SMAD family member 4 [Source:MGI Symbol;Acc:MGI:894293]
4. Knop1 ENSMUSG00000030980 2926 1.499 0.790 0.709 - - - - lysine rich nucleolar protein 1 [Source:MGI Symbol;Acc:MGI:1913606]
5. Phb ENSMUSG00000038845 3385 1.415 0.705 0.710 - - - - prohibitin [Source:MGI Symbol;Acc:MGI:97572]
6. Sf3b5 ENSMUSG00000078348 4648 0.854 0.854 - - - - - splicing factor 3b, subunit 5 [Source:MGI Symbol;Acc:MGI:1913375]
7. Ccdc47 ENSMUSG00000078622 3526 0.847 0.847 - - - - - coiled-coil domain containing 47 [Source:MGI Symbol;Acc:MGI:1914413]
8. Rps2 ENSMUSG00000044533 13115 0.845 0.845 - - - - - ribosomal protein S2 [Source:MGI Symbol;Acc:MGI:105110]
9. Psma5 ENSMUSG00000068749 4310 0.84 0.840 - - - - - proteasome (prosome, macropain) subunit, alpha type 5 [Source:MGI Symbol;Acc:MGI:1347009]
10. Rfc1 ENSMUSG00000029191 4343 0.837 0.837 - - - - - replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]
11. Tmem258 ENSMUSG00000036372 5133 0.833 0.833 - - - - - transmembrane protein 258 [Source:MGI Symbol;Acc:MGI:1916288]
12. Hadhb ENSMUSG00000059447 4287 0.831 0.831 - - - - - hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit [Source:MGI Symbol;Acc:MGI:2136381]
13. Hat1 ENSMUSG00000027018 4642 0.83 - 0.830 - - - - histone aminotransferase 1 [Source:MGI Symbol;Acc:MGI:96013]
14. Cwc15 ENSMUSG00000004096 5974 0.83 0.830 - - - - - CWC15 spliceosome-associated protein [Source:MGI Symbol;Acc:MGI:1913320]
15. Manf ENSMUSG00000032575 6450 0.829 0.829 - - - - - mesencephalic astrocyte-derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:1922090]
16. Cd63 ENSMUSG00000025351 3771 0.827 0.827 - - - - - CD63 antigen [Source:MGI Symbol;Acc:MGI:99529]
17. Abcf2 ENSMUSG00000028953 2070 0.826 0.826 - - - - - ATP-binding cassette, sub-family F (GCN20), member 2 [Source:MGI Symbol;Acc:MGI:1351657]
18. Rnf185 ENSMUSG00000020448 2485 0.825 - 0.825 - - - - ring finger protein 185 [Source:MGI Symbol;Acc:MGI:1922078]
19. Mrpl20 ENSMUSG00000029066 1337 0.824 0.824 - - - - - mitochondrial ribosomal protein L20 [Source:MGI Symbol;Acc:MGI:2137221]
20. Ilkap ENSMUSG00000026309 2636 0.824 0.824 - - - - - integrin-linked kinase-associated serine/threonine phosphatase 2C [Source:MGI Symbol;Acc:MGI:1914694]
21. Vezf1 ENSMUSG00000018377, ENSMUSG00000098546 6251 0.824 - 0.824 - - - - vascular endothelial zinc finger 1 [Source:MGI Symbol;Acc:MGI:1313291]
22. Ckap2 ENSMUSG00000037725 3722 0.823 0.823 - - - - - cytoskeleton associated protein 2 [Source:MGI Symbol;Acc:MGI:1931797]
23. Rnf4 ENSMUSG00000029110 3314 0.818 0.818 - - - - - ring finger protein 4 [Source:MGI Symbol;Acc:MGI:1201691]
24. Seh1l ENSMUSG00000079614 7707 0.817 - 0.817 - - - - SEH1-like (S. cerevisiae [Source:MGI Symbol;Acc:MGI:1919374]
25. Rfc2 ENSMUSG00000023104 3987 0.817 0.817 - - - - - replication factor C (activator 1) 2 [Source:MGI Symbol;Acc:MGI:1341868]
26. Slc39a10 ENSMUSG00000025986 4445 0.817 0.817 - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:MGI Symbol;Acc:MGI:1914515]
27. Sar1a ENSMUSG00000020088 3553 0.817 0.817 - - - - - secretion associated Ras related GTPase 1A [Source:MGI Symbol;Acc:MGI:98230]
28. Pih1d1 ENSMUSG00000003423 2278 0.817 0.817 - - - - - PIH1 domain containing 1 [Source:MGI Symbol;Acc:MGI:1916095]
29. Tmem30a ENSMUSG00000032328 4977 0.813 - 0.813 - - - - transmembrane protein 30A [Source:MGI Symbol;Acc:MGI:106402]
30. Trim59 ENSMUSG00000034317 2969 0.813 0.813 - - - - - tripartite motif-containing 59 [Source:MGI Symbol;Acc:MGI:1914199]
31. Emc8 ENSMUSG00000031819 1988 0.811 0.811 - - - - - ER membrane protein complex subunit 8 [Source:MGI Symbol;Acc:MGI:1343095]
32. Ipo9 ENSMUSG00000041879 7282 0.809 0.809 - - - - - importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
33. Helz ENSMUSG00000020721 3743 0.809 0.809 - - - - - helicase with zinc finger domain [Source:MGI Symbol;Acc:MGI:1925705]
34. Sox4 ENSMUSG00000076431 8757 0.808 - 0.808 - - - - SRY (sex determining region Y)-box 4 [Source:MGI Symbol;Acc:MGI:98366]
35. Zfp771 ENSMUSG00000054716 5576 0.805 0.805 - - - - - zinc finger protein 771 [Source:MGI Symbol;Acc:MGI:2442050]
36. Kctd3 ENSMUSG00000026608 1856 0.802 0.802 - - - - - potassium channel tetramerisation domain containing 3 [Source:MGI Symbol;Acc:MGI:2444629]
37. Pigp ENSMUSG00000022940 3394 0.802 0.802 - - - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:MGI Symbol;Acc:MGI:1860433]
38. Hnrnph2 ENSMUSG00000045427 6648 0.802 0.802 - - - - - heterogeneous nuclear ribonucleoprotein H2 [Source:MGI Symbol;Acc:MGI:1201779]
39. Rnf7 ENSMUSG00000051234 6537 0.801 0.801 - - - - - ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
40. Fam98a ENSMUSG00000002017 2299 0.8 0.800 - - - - - family with sequence similarity 98, member A [Source:MGI Symbol;Acc:MGI:1919972]
41. Uchl3 ENSMUSG00000022111 1835 0.8 0.800 - - - - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:MGI Symbol;Acc:MGI:1355274]
42. Rbm28 ENSMUSG00000029701 4147 0.797 0.797 - - - - - RNA binding motif protein 28 [Source:MGI Symbol;Acc:MGI:2655711]
43. Dhx9 ENSMUSG00000042699 8779 0.795 0.795 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:MGI Symbol;Acc:MGI:108177]
44. Gm15148 ENSMUSG00000082423 4827 0.794 - 0.794 - - - - predicted gene 15148 [Source:MGI Symbol;Acc:MGI:3705350]
45. Zc3hc1 ENSMUSG00000039130 2638 0.794 0.794 - - - - - zinc finger, C3HC type 1 [Source:MGI Symbol;Acc:MGI:1916023]
46. Gle1 ENSMUSG00000019715 2053 0.793 - 0.793 - - - - GLE1 RNA export mediator (yeast) [Source:MGI Symbol;Acc:MGI:1921662]
47. Chd6 ENSMUSG00000057133 4383 0.793 0.793 - - - - - chromodomain helicase DNA binding protein 6 [Source:MGI Symbol;Acc:MGI:1918639]
48. Tlk1 ENSMUSG00000041997 1778 0.792 0.792 - - - - - tousled-like kinase 1 [Source:MGI Symbol;Acc:MGI:2441683]
49. Faf1 ENSMUSG00000010517 1671 0.79 0.790 - - - - - Fas-associated factor 1 [Source:MGI Symbol;Acc:MGI:109419]
50. Kif5c ENSMUSG00000026764 1283 0.79 0.790 - - - - - kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
51. Smek2 3288 0.789 0.789 - - - - - SMEK homolog 2, suppressor of mek1 (Dictyostelium), transcript variant X2
52. Bod1 ENSMUSG00000044502 5647 0.788 0.788 - - - - - biorientation of chromosomes in cell division 1 [Source:MGI Symbol;Acc:MGI:1916806]
53. Xrcc5 ENSMUSG00000026187 1592 0.788 0.788 - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:MGI Symbol;Acc:MGI:104517]
54. Fdps ENSMUSG00000059743 2077 0.788 0.788 - - - - - farnesyl diphosphate synthetase [Source:MGI Symbol;Acc:MGI:104888]
55. Trpc4ap ENSMUSG00000038324 3417 0.788 - 0.788 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein [Source:MGI Symbol;Acc:MGI:1930751]
56. Dlst ENSMUSG00000004789 1541 0.787 0.787 - - - - - dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) [Source:MGI Symbol;Acc:MGI:1926170]
57. Mrpl50 ENSMUSG00000044018 1643 0.785 0.785 - - - - - mitochondrial ribosomal protein L50 [Source:MGI Symbol;Acc:MGI:107329]
58. Etfb ENSMUSG00000004610 1827 0.785 0.785 - - - - - electron transferring flavoprotein, beta polypeptide [Source:MGI Symbol;Acc:MGI:106098]
59. Actr2 ENSMUSG00000020152 3552 0.784 0.784 - - - - - ARP2 actin-related protein 2 [Source:MGI Symbol;Acc:MGI:1913963]
60. Prkcsh ENSMUSG00000003402 3565 0.784 0.784 - - - - - protein kinase C substrate 80K-H [Source:MGI Symbol;Acc:MGI:107877]
61. Sec11a ENSMUSG00000025724 5429 0.783 0.783 - - - - - SEC11 homolog A, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1929464]
62. Usp33 ENSMUSG00000025437 1184 0.783 0.783 - - - - - ubiquitin specific peptidase 33 [Source:MGI Symbol;Acc:MGI:2159711]
63. Nol7 ENSMUSG00000063200 2511 0.782 0.782 - - - - - nucleolar protein 7 [Source:MGI Symbol;Acc:MGI:1917328]
64. Neo1 ENSMUSG00000032340 4225 0.781 0.781 - - - - - neogenin [Source:MGI Symbol;Acc:MGI:1097159]
65. Sfmbt1 ENSMUSG00000006527 1043 0.78 0.780 - - - - - Scm-like with four mbt domains 1 [Source:MGI Symbol;Acc:MGI:1859609]
66. Fgfr1op ENSMUSG00000069135 1508 0.78 0.780 - - - - - Fgfr1 oncogene partner [Source:MGI Symbol;Acc:MGI:1922546]
67. Gm9892 ENSMUSG00000052825 6048 0.779 0.779 - - - - - predicted gene 9892 [Source:MGI Symbol;Acc:MGI:3701610]
68. Hras ENSMUSG00000025499 4044 0.779 0.779 - - - - - Harvey rat sarcoma virus oncogene [Source:MGI Symbol;Acc:MGI:96224]
69. Prim2 ENSMUSG00000026134 5806 0.779 0.779 - - - - - DNA primase, p58 subunit [Source:MGI Symbol;Acc:MGI:97758]
70. Srek1ip1 ENSMUSG00000021716 2652 0.778 0.778 - - - - - splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 [Source:MGI Symbol;Acc:MGI:1914538]
71. Nr2f6 ENSMUSG00000002393 812 0.778 0.778 - - - - - nuclear receptor subfamily 2, group F, member 6 [Source:MGI Symbol;Acc:MGI:1352453]
72. Fyn ENSMUSG00000019843 2176 0.778 0.778 - - - - - Fyn proto-oncogene [Source:MGI Symbol;Acc:MGI:95602]
73. Uhmk1 ENSMUSG00000026667 3184 0.777 - 0.777 - - - - U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
74. Gm12751 ENSMUSG00000062554 1377 0.777 - 0.777 - - - - predicted gene 12751 [Source:MGI Symbol;Acc:MGI:3651049]
75. Dctn6 ENSMUSG00000031516 4647 0.777 0.777 - - - - - dynactin 6 [Source:MGI Symbol;Acc:MGI:1343154]
76. Acap2 ENSMUSG00000049076 1853 0.776 0.776 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:MGI Symbol;Acc:MGI:1925868]
77. Fastkd3 ENSMUSG00000021532 1330 0.776 0.776 - - - - - FAST kinase domains 3 [Source:MGI Symbol;Acc:MGI:1916827]
78. Ube2f ENSMUSG00000034343 2535 0.775 0.775 - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:MGI Symbol;Acc:MGI:1915171]
79. Tmf1 ENSMUSG00000030059 432 0.774 0.774 - - - - - TATA element modulatory factor 1 [Source:MGI Symbol;Acc:MGI:2684999]
80. Ccp110 ENSMUSG00000033904 1564 0.773 0.773 - - - - - centriolar coiled coil protein 110 [Source:MGI Symbol;Acc:MGI:2141942]
81. Tead1 ENSMUSG00000055320 9676 0.773 - 0.773 - - - - TEA domain family member 1 [Source:MGI Symbol;Acc:MGI:101876]
82. Nup214 ENSMUSG00000001855 1695 0.773 0.773 - - - - - nucleoporin 214 [Source:MGI Symbol;Acc:MGI:1095411]
83. Snx5 ENSMUSG00000027423 3464 0.772 0.772 - - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
84. Kin ENSMUSG00000037262 2063 0.771 0.771 - - - - - Kin17 DNA and RNA binding protein [Source:MGI Symbol;Acc:MGI:96676]
85. Cers2 ENSMUSG00000015714 979 0.771 0.771 - - - - - ceramide synthase 2 [Source:MGI Symbol;Acc:MGI:1924143]
86. Srsf2 ENSMUSG00000034120 1325 0.77 - 0.770 - - - - serine/arginine-rich splicing factor 2 [Source:MGI Symbol;Acc:MGI:98284]
87. Hsd17b12 ENSMUSG00000027195 1176 0.77 0.770 - - - - - hydroxysteroid (17-beta) dehydrogenase 12 [Source:MGI Symbol;Acc:MGI:1926967]
88. Polr3f ENSMUSG00000027427 1574 0.769 0.769 - - - - - polymerase (RNA) III (DNA directed) polypeptide F [Source:MGI Symbol;Acc:MGI:1924086]
89. Scrib ENSMUSG00000022568 2622 0.769 0.769 - - - - - scribbled planar cell polarity [Source:MGI Symbol;Acc:MGI:2145950]
90. Pspc1 ENSMUSG00000021938 2171 0.769 0.769 - - - - - paraspeckle protein 1 [Source:MGI Symbol;Acc:MGI:1913895]
91. Setd1a ENSMUSG00000042308 2472 0.769 0.769 - - - - - SET domain containing 1A [Source:MGI Symbol;Acc:MGI:2446244]
92. Zfp236 ENSMUSG00000041258 968 0.769 0.769 - - - - - zinc finger protein 236 [Source:MGI Symbol;Acc:MGI:1926950]
93. Pten ENSMUSG00000013663 1937 0.768 0.768 - - - - - phosphatase and tensin homolog [Source:MGI Symbol;Acc:MGI:109583]
94. Nus1 ENSMUSG00000023068 4291 0.768 0.768 - - - - - NUS1 dehydrodolichyl diphosphate synthase subunit [Source:MGI Symbol;Acc:MGI:1196365]
95. Znrf2 ENSMUSG00000058446 742 0.768 0.768 - - - - - zinc and ring finger 2 [Source:MGI Symbol;Acc:MGI:1196246]
96. Mcfd2 ENSMUSG00000024150 1376 0.767 0.767 - - - - - multiple coagulation factor deficiency 2 [Source:MGI Symbol;Acc:MGI:2183439]
97. Usp36 ENSMUSG00000033909 2464 0.767 0.767 - - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
98. Gm3550 ENSMUSG00000078240 469 0.767 - 0.767 - - - - predicted gene 3550 [Source:MGI Symbol;Acc:MGI:3781727]
99. Fam102b ENSMUSG00000040339 1195 0.766 0.766 - - - - - family with sequence similarity 102, member B [Source:MGI Symbol;Acc:MGI:3036259]
100. Sipa1 ENSMUSG00000056917 2263 0.766 0.766 - - - - - signal-induced proliferation associated gene 1 [Source:MGI Symbol;Acc:MGI:107576]

There are 270 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA