Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Stradb

Gene Name Gene ID Reads Annotation
Stradb ENSMUSG00000026027 581 STE20-related kinase adaptor beta [Source:MGI Symbol;Acc:MGI:2144047]







Genes with expression patterns similar to Stradb

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Stradb ENSMUSG00000026027 581 6 1.000 1.000 1.000 1.000 1.000 1.000 STE20-related kinase adaptor beta [Source:MGI Symbol;Acc:MGI:2144047]
2. Polr3a ENSMUSG00000025280 489 1.766 0.790 - - - 0.976 - polymerase (RNA) III (DNA directed) polypeptide A [Source:MGI Symbol;Acc:MGI:2681836]
3. Slc25a22 ENSMUSG00000019082 749 1.664 0.788 - - - 0.876 - solute carrier family 25 (mitochondrial carrier, glutamate), member 22 [Source:MGI Symbol;Acc:MGI:1915517]
4. Ttc27 ENSMUSG00000024078 781 1.66 0.752 - - - 0.908 - tetratricopeptide repeat domain 27 [Source:MGI Symbol;Acc:MGI:1921446]
5. Ephb2 ENSMUSG00000028664 1793 1.584 0.817 - - - 0.767 - Eph receptor B2 [Source:MGI Symbol;Acc:MGI:99611]
6. Pan3 ENSMUSG00000029647 1662 1.573 0.755 - - - 0.818 - PAN3 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1919837]
7. Decr2 ENSMUSG00000036775 1047 1.543 0.734 - - - 0.809 - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
8. Scamp1 ENSMUSG00000021687 1701 1.538 0.747 - - - 0.791 - secretory carrier membrane protein 1 [Source:MGI Symbol;Acc:MGI:1349480]
9. Trip4 ENSMUSG00000032386 1218 1.49 0.702 - - - 0.788 - thyroid hormone receptor interactor 4 [Source:MGI Symbol;Acc:MGI:1928469]
10. Bend3 ENSMUSG00000038214 258 0.971 - - - - 0.971 - BEN domain containing 3 [Source:MGI Symbol;Acc:MGI:2677212]
11. Gm2199 ENSMUSG00000083829 455 0.958 - - - - 0.958 - predicted gene 2199 [Source:MGI Symbol;Acc:MGI:3780369]
12. Gm9083 ENSMUSG00000083033 141 0.953 - - - - 0.953 - predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
13. Gzmc ENSMUSG00000079186 38 0.95 - - - - 0.950 - granzyme C [Source:MGI Symbol;Acc:MGI:109256]
14. Vmn1r132 ENSMUSG00000074322 39 0.95 - - - - 0.950 - vomeronasal 1 receptor 132 [Source:MGI Symbol;Acc:MGI:3647009]
15. Med28 ENSMUSG00000015804 2949 0.95 - - - - 0.950 - mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
16. Pla2g3 ENSMUSG00000034579 79 0.949 - - - - 0.949 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
17. Jazf1 ENSMUSG00000063568 47 0.949 - - - - 0.949 - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
18. Kctd10 ENSMUSG00000001098 136 0.949 - - - - 0.949 - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
19. Ttc37 ENSMUSG00000033991 159 0.948 - - - - 0.948 - tetratricopeptide repeat domain 37 [Source:MGI Symbol;Acc:MGI:2679923]
20. E030013I19Rik ENSMUSG00000086843 118 0.948 - - - - 0.948 - RIKEN cDNA E030013I19 gene [Source:MGI Symbol;Acc:MGI:2443735]
21. Gm11989 ENSMUSG00000083553 73 0.948 - - - - 0.948 - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
22. Ampd3 ENSMUSG00000005686 113 0.948 - - - - 0.948 - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
23. Gm5644 ENSMUSG00000100104 76 0.948 - - - - 0.948 - predicted gene 5644 [Source:MGI Symbol;Acc:MGI:3646381]
24. Tmem25 ENSMUSG00000002032 100 0.948 - - - - 0.948 - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
25. Acer3 ENSMUSG00000030760 598 0.947 - - - - 0.947 - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
26. Tbc1d2 ENSMUSG00000039813 51 0.947 - - - - 0.947 - TBC1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:2652885]
27. Tfpt ENSMUSG00000006335 157 0.947 - - - - 0.947 - TCF3 (E2A) fusion partner [Source:MGI Symbol;Acc:MGI:1916964]
28. Ccdc126 ENSMUSG00000050786 121 0.946 - - - - 0.946 - coiled-coil domain containing 126 [Source:MGI Symbol;Acc:MGI:1889376]
29. Pmel ENSMUSG00000025359 54 0.946 - - - - 0.946 - premelanosome protein [Source:MGI Symbol;Acc:MGI:98301]
30. Gm14813 ENSMUSG00000082549 69 0.946 - - - - 0.946 - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
31. Wnk4 ENSMUSG00000035112 162 0.945 - - - - 0.945 - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
32. Ddx47 ENSMUSG00000030204 1576 0.945 - - - - 0.945 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]
33. 1500026H17Rik ENSMUSG00000097383 939 0.945 - - - - 0.945 - RIKEN cDNA 1500026H17 gene [Source:MGI Symbol;Acc:MGI:1916252]
34. Snph ENSMUSG00000027457 95 0.945 - - - - 0.945 - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
35. Srxn1 ENSMUSG00000032802 244 0.944 - - - - 0.944 - sulfiredoxin 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:104971]
36. Rhag ENSMUSG00000023926 119 0.944 - - - - 0.944 - Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]
37. Zc3h6 ENSMUSG00000042851 135 0.943 - - - - 0.943 - zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]
38. Surf2 ENSMUSG00000014873 372 0.942 - - - - 0.942 - surfeit gene 2 [Source:MGI Symbol;Acc:MGI:98444]
39. Fbxo8 ENSMUSG00000038206 1079 0.942 - - - - 0.942 - F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
40. Slc25a46 ENSMUSG00000024259 2222 0.941 - - - - 0.941 - solute carrier family 25, member 46 [Source:MGI Symbol;Acc:MGI:1914703]
41. Grid2 ENSMUSG00000071424 180 0.941 - - - - 0.941 - glutamate receptor, ionotropic, delta 2 [Source:MGI Symbol;Acc:MGI:95813]
42. Kcnab2 ENSMUSG00000028931 291 0.94 - - - - 0.940 - potassium voltage-gated channel, shaker-related subfamily, beta member 2 [Source:MGI Symbol;Acc:MGI:109239]
43. Ap4b1 ENSMUSG00000032952 448 0.94 - - - - 0.940 - adaptor-related protein complex AP-4, beta 1 [Source:MGI Symbol;Acc:MGI:1337130]
44. Mnt ENSMUSG00000000282 715 0.94 - - - - 0.940 - max binding protein [Source:MGI Symbol;Acc:MGI:109150]
45. Ccdc177 ENSMUSG00000062961 159 0.939 - - - - 0.939 - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
46. Lpin1 ENSMUSG00000020593 407 0.939 - - - - 0.939 - lipin 1 [Source:MGI Symbol;Acc:MGI:1891340]
47. Snord47 ENSMUSG00000064968 286 0.938 - - - - 0.938 - small nucleolar RNA, C/D box 47 [Source:MGI Symbol;Acc:MGI:3819537]
48. 4930480K23Rik ENSMUSG00000097284 105 0.938 - - - - 0.938 - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
49. Sec14l2 ENSMUSG00000003585 109 0.937 - - - - 0.937 - SEC14-like lipid binding 2 [Source:MGI Symbol;Acc:MGI:1915065]
50. 2610307P16Rik ENSMUSG00000085936 253 0.937 - - - - 0.937 - RIKEN cDNA 2610307P16 gene [Source:MGI Symbol;Acc:MGI:1919768]
51. Pacsin1 ENSMUSG00000040276 185 0.937 - - - - 0.937 - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
52. Gm23913 Gm23913 84 0.937 - - - - 0.937 -
53. Hivep3 ENSMUSG00000028634 196 0.937 - - - - 0.937 - human immunodeficiency virus type I enhancer binding protein 3 [Source:MGI Symbol;Acc:MGI:106589]
54. Apitd1 412 0.937 - - - - 0.937 - apoptosis-inducing, TAF9-like domain 1
55. Crem ENSMUSG00000063889 328 0.936 - - - - 0.936 - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
56. Fgf10 ENSMUSG00000021732 520 0.935 - - - - 0.935 - fibroblast growth factor 10 [Source:MGI Symbol;Acc:MGI:1099809]
57. Acsl5 ENSMUSG00000024981 381 0.932 - - - - 0.932 - acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
58. Hnrnpm ENSMUSG00000059208 4638 0.932 - - - - 0.932 - heterogeneous nuclear ribonucleoprotein M [Source:MGI Symbol;Acc:MGI:1926465]
59. Cmpk2 ENSMUSG00000020638 304 0.931 - - - - 0.931 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:99830]
60. Plxnc1 ENSMUSG00000074785 183 0.931 - - - - 0.931 - plexin C1 [Source:MGI Symbol;Acc:MGI:1890127]
61. Bok ENSMUSG00000026278 242 0.931 - - - - 0.931 - BCL2-related ovarian killer [Source:MGI Symbol;Acc:MGI:1858494]
62. Oscp1 ENSMUSG00000042616 527 0.931 - - - - 0.931 - organic solute carrier partner 1 [Source:MGI Symbol;Acc:MGI:1916308]
63. Zfp866 ENSMUSG00000043090 1114 0.93 - - - - 0.930 - zinc finger protein 866 [Source:MGI Symbol;Acc:MGI:3584369]
64. Nuak2 ENSMUSG00000009772 426 0.928 - - - - 0.928 - NUAK family, SNF1-like kinase, 2 [Source:MGI Symbol;Acc:MGI:1921387]
65. Ldb3 ENSMUSG00000021798 170 0.928 - - - - 0.928 - LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]
66. H2-D1 ENSMUSG00000073411 344 0.927 - - - - 0.927 - histocompatibility 2, D region locus 1 [Source:MGI Symbol;Acc:MGI:95896]
67. Cnpy3 ENSMUSG00000023973 1134 0.926 - - - - 0.926 - canopy FGF signaling regulator 3 [Source:MGI Symbol;Acc:MGI:1919279]
68. Krt20 ENSMUSG00000035775 230 0.926 - - - - 0.926 - keratin 20 [Source:MGI Symbol;Acc:MGI:1914059]
69. Lmbr1 ENSMUSG00000010721 572 0.925 - - - - 0.925 - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
70. Txnrd3 ENSMUSG00000000811 405 0.925 - - - - 0.925 - thioredoxin reductase 3 [Source:MGI Symbol;Acc:MGI:2386711]
71. Atr ENSMUSG00000032409 420 0.924 - - - - 0.924 - ataxia telangiectasia and Rad3 related [Source:MGI Symbol;Acc:MGI:108028]
72. Slc22a23 ENSMUSG00000038267 407 0.923 - - - - 0.923 - solute carrier family 22, member 23 [Source:MGI Symbol;Acc:MGI:1920352]
73. Fnip2 ENSMUSG00000061175 532 0.923 - - - - 0.923 - folliculin interacting protein 2 [Source:MGI Symbol;Acc:MGI:2683054]
74. 2310039H08Rik ENSMUSG00000062619 996 0.923 - - - - 0.923 - RIKEN cDNA 2310039H08 gene [Source:MGI Symbol;Acc:MGI:1914351]
75. Gm26648 ENSMUSG00000097275 484 0.922 - - - - 0.922 - predicted gene, 26648 [Source:MGI Symbol;Acc:MGI:5477142]
76. Ets2 ENSMUSG00000022895 1363 0.922 - - - - 0.922 - E26 avian leukemia oncogene 2, 3' domain [Source:MGI Symbol;Acc:MGI:95456]
77. Lrrc28 ENSMUSG00000030556 515 0.92 - - - - 0.920 - leucine rich repeat containing 28 [Source:MGI Symbol;Acc:MGI:1915689]
78. Frat2 ENSMUSG00000047604 478 0.919 - - - - 0.919 - frequently rearranged in advanced T cell lymphomas 2 [Source:MGI Symbol;Acc:MGI:2673967]
79. Tarbp2 ENSMUSG00000023051 2059 0.918 - - - - 0.918 - TARBP2, RISC loading complex RNA binding subunit [Source:MGI Symbol;Acc:MGI:103027]
80. Mapk4 ENSMUSG00000024558 228 0.918 - - - - 0.918 - mitogen-activated protein kinase 4 [Source:MGI Symbol;Acc:MGI:2444559]
81. Notch1 ENSMUSG00000026923 540 0.918 - - - - 0.918 - notch 1 [Source:MGI Symbol;Acc:MGI:97363]
82. 5730455P16Rik ENSMUSG00000057181 986 0.918 - - - - 0.918 - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
83. Prps2 ENSMUSG00000025742 1294 0.917 - - - - 0.917 - phosphoribosyl pyrophosphate synthetase 2 [Source:MGI Symbol;Acc:MGI:97776]
84. Gm26624 ENSMUSG00000097122 753 0.917 - - - - 0.917 - predicted gene, 26624 [Source:MGI Symbol;Acc:MGI:5477118]
85. Ddx27 ENSMUSG00000017999 1798 0.917 - - - - 0.917 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:MGI Symbol;Acc:MGI:2385884]
86. Mcoln1 ENSMUSG00000004567 281 0.916 - - - - 0.916 - mucolipin 1 [Source:MGI Symbol;Acc:MGI:1890498]
87. Ppm1f ENSMUSG00000026181 531 0.916 - - - - 0.916 - protein phosphatase 1F (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:1918464]
88. Sgsm3 ENSMUSG00000042303 608 0.915 - - - - 0.915 - small G protein signaling modulator 3 [Source:MGI Symbol;Acc:MGI:1916329]
89. Loh12cr1 Loh12cr1 321 0.914 - - - - 0.914 -
90. Piga ENSMUSG00000031381 638 0.913 - - - - 0.913 - phosphatidylinositol glycan anchor biosynthesis, class A [Source:MGI Symbol;Acc:MGI:99461]
91. BC026585 1005 0.913 - - - - 0.913 - cDNA sequence BC026585, transcript variant X1
92. Katnb1 ENSMUSG00000031787 333 0.913 - - - - 0.913 - katanin p80 (WD40-containing) subunit B 1 [Source:MGI Symbol;Acc:MGI:1921437]
93. H2-T23 ENSMUSG00000067212 1037 0.913 - - - - 0.913 - histocompatibility 2, T region locus 23 [Source:MGI Symbol;Acc:MGI:95957]
94. Fggy ENSMUSG00000028573 140 0.912 - - - - 0.912 - FGGY carbohydrate kinase domain containing [Source:MGI Symbol;Acc:MGI:1922828]
95. Acss2 ENSMUSG00000027605 588 0.912 - - - - 0.912 - acyl-CoA synthetase short-chain family member 2 [Source:MGI Symbol;Acc:MGI:1890410]
96. Fkbp11 ENSMUSG00000003355 578 0.912 - - - - 0.912 - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
97. Klc2 ENSMUSG00000024862 582 0.911 - - - - 0.911 - kinesin light chain 2 [Source:MGI Symbol;Acc:MGI:107953]
98. Ptges2 ENSMUSG00000026820 419 0.911 - - - - 0.911 - prostaglandin E synthase 2 [Source:MGI Symbol;Acc:MGI:1917592]
99. Ifi30 ENSMUSG00000031838, ENSMUSG00000110777 708 0.911 - - - - 0.911 - interferon gamma inducible protein 30 [Source:NCBI gene;Acc:65972]
100. Icmt ENSMUSG00000039662 569 0.91 - - - - 0.910 - isoprenylcysteine carboxyl methyltransferase [Source:MGI Symbol;Acc:MGI:1888594]

There are 552 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA