Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Stra13

Gene Name Gene ID Reads Annotation
Stra13 3678 stimulated by retinoic acid 13, transcript variant X8







Genes with expression patterns similar to Stra13

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Stra13 3678 6 1.000 1.000 1.000 1.000 1.000 1.000 stimulated by retinoic acid 13, transcript variant X8
2. Zbtb8os ENSMUSG00000057572 1389 1.749 0.824 0.925 - - - - zinc finger and BTB domain containing 8 opposite strand [Source:MGI Symbol;Acc:MGI:1914356]
3. Slc30a7 ENSMUSG00000054414 1863 1.7 0.787 0.913 - - - - solute carrier family 30 (zinc transporter), member 7 [Source:MGI Symbol;Acc:MGI:1913750]
4. Vps33a ENSMUSG00000029434 711 1.684 0.785 0.899 - - - - VPS33A CORVET/HOPS core subunit [Source:MGI Symbol;Acc:MGI:1924823]
5. Foxo1 ENSMUSG00000044167 1926 1.659 - 0.907 - - 0.752 - forkhead box O1 [Source:MGI Symbol;Acc:MGI:1890077]
6. Gars ENSMUSG00000029777 5691 1.646 - 0.866 - - 0.780 - glycyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2449057]
7. Gng12 ENSMUSG00000036402 3017 1.646 - 0.895 - - 0.751 - guanine nucleotide binding protein (G protein), gamma 12 [Source:MGI Symbol;Acc:MGI:1336171]
8. Ndufa9 ENSMUSG00000000399 1650 1.638 - 0.902 - - 0.736 - NADH:ubiquinone oxidoreductase subunit A9 [Source:MGI Symbol;Acc:MGI:1913358]
9. Aif1l ENSMUSG00000001864 1602 1.623 0.731 0.892 - - - - allograft inflammatory factor 1-like [Source:MGI Symbol;Acc:MGI:1919598]
10. Dnajc10 ENSMUSG00000027006 3973 1.609 0.738 0.871 - - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:MGI Symbol;Acc:MGI:1914111]
11. Akr1b10 ENSMUSG00000061758 586 1.578 0.809 - - - - 0.769 aldo-keto reductase family 1, member B10 (aldose reductase) [Source:MGI Symbol;Acc:MGI:1915111]
12. Arrb2 ENSMUSG00000060216 1401 1.567 - 0.832 - - 0.735 - arrestin, beta 2 [Source:MGI Symbol;Acc:MGI:99474]
13. Zic2 ENSMUSG00000061524 472 1.547 - - - - 0.737 0.810 zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
14. Eps8l2 ENSMUSG00000025504 185 1.546 0.809 - - - - 0.737 EPS8-like 2 [Source:MGI Symbol;Acc:MGI:2138828]
15. Rbpms2 ENSMUSG00000032387 1488 1.52 - 0.794 - - - 0.726 RNA binding protein with multiple splicing 2 [Source:MGI Symbol;Acc:MGI:1919223]
16. Bcl9 ENSMUSG00000038256 4966 1.507 - 0.792 - - 0.715 - B cell CLL/lymphoma 9 [Source:MGI Symbol;Acc:MGI:1924828]
17. Tmem248 ENSMUSG00000053094 2906 1.507 0.803 - - - - 0.704 transmembrane protein 248 [Source:MGI Symbol;Acc:MGI:1918917]
18. Nudt11 ENSMUSG00000073295 757 1.485 - - - - 0.753 0.732 nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
19. Ppib ENSMUSG00000032383 722 1.484 - - - - 0.769 0.715 peptidylprolyl isomerase B [Source:MGI Symbol;Acc:MGI:97750]
20. Zfp799 ENSMUSG00000095253 1352 1.466 0.744 - - - - 0.722 zinc finger protein 799 [Source:MGI Symbol;Acc:MGI:2443934]
21. Fam105b Fam105b 1241 1.464 - - 0.711 - - 0.753
22. Mvb12b ENSMUSG00000038740 1329 1.442 - - - - 0.703 0.739 multivesicular body subunit 12B [Source:MGI Symbol;Acc:MGI:1919793]
23. Kif23 ENSMUSG00000032254 3411 0.939 - 0.939 - - - - kinesin family member 23 [Source:MGI Symbol;Acc:MGI:1919069]
24. Iscu ENSMUSG00000025825 1949 0.93 - 0.930 - - - - iron-sulfur cluster assembly enzyme [Source:MGI Symbol;Acc:MGI:1913633]
25. Ylpm1 ENSMUSG00000021244 4313 0.929 - 0.929 - - - - YLP motif containing 1 [Source:MGI Symbol;Acc:MGI:1926195]
26. Msl2 ENSMUSG00000066415 3356 0.925 - 0.925 - - - - MSL complex subunit 2 [Source:MGI Symbol;Acc:MGI:1925103]
27. Rbmxl1 ENSMUSG00000037070 8147 0.925 - 0.925 - - - - RNA binding motif protein, X-linked like-1 [Source:MGI Symbol;Acc:MGI:1343045]
28. Zfp266 ENSMUSG00000060510 4296 0.923 - 0.923 - - - - zinc finger protein 266 [Source:MGI Symbol;Acc:MGI:1924769]
29. Atf2 ENSMUSG00000027104 8295 0.921 - 0.921 - - - - activating transcription factor 2 [Source:MGI Symbol;Acc:MGI:109349]
30. Kxd1 ENSMUSG00000055553 1368 0.919 - 0.919 - - - - KxDL motif containing 1 [Source:MGI Symbol;Acc:MGI:1922870]
31. Mtch2 ENSMUSG00000027282, ENSMUSG00000111714 3441 0.919 - 0.919 - - - - mitochondrial carrier 2 [Source:MGI Symbol;Acc:MGI:1929260]
32. Xpot ENSMUSG00000034667 3527 0.918 - 0.918 - - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:MGI Symbol;Acc:MGI:1920442]
33. Acly ENSMUSG00000020917 6035 0.916 - 0.916 - - - - ATP citrate lyase [Source:MGI Symbol;Acc:MGI:103251]
34. Llph ENSMUSG00000020224 3242 0.916 - 0.916 - - - - LLP homolog, long-term synaptic facilitation (Aplysia) [Source:MGI Symbol;Acc:MGI:1913475]
35. Denr ENSMUSG00000023106 3840 0.915 - 0.915 - - - - density-regulated protein [Source:MGI Symbol;Acc:MGI:1915434]
36. Akt3 ENSMUSG00000019699 1570 0.915 - 0.915 - - - - thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
37. Trim24 ENSMUSG00000029833 5331 0.914 - 0.914 - - - - tripartite motif-containing 24 [Source:MGI Symbol;Acc:MGI:109275]
38. Pdcd10 ENSMUSG00000027835 1549 0.914 - 0.914 - - - - programmed cell death 10 [Source:MGI Symbol;Acc:MGI:1928396]
39. Ift46 ENSMUSG00000002031 2247 0.913 - 0.913 - - - - intraflagellar transport 46 [Source:MGI Symbol;Acc:MGI:1923818]
40. Birc6 ENSMUSG00000024073 6489 0.913 - 0.913 - - - - baculoviral IAP repeat-containing 6 [Source:MGI Symbol;Acc:MGI:1276108]
41. Pcsk7 ENSMUSG00000035382 1328 0.911 - 0.911 - - - - proprotein convertase subtilisin/kexin type 7 [Source:MGI Symbol;Acc:MGI:107421]
42. Nlrc3 ENSMUSG00000049871 675 0.911 - 0.911 - - - - NLR family, CARD domain containing 3 [Source:MGI Symbol;Acc:MGI:2444070]
43. Polb ENSMUSG00000031536 1200 0.911 - 0.911 - - - - polymerase (DNA directed), beta [Source:MGI Symbol;Acc:MGI:97740]
44. Endov ENSMUSG00000039850 3015 0.909 - 0.909 - - - - endonuclease V [Source:MGI Symbol;Acc:MGI:2444688]
45. Lztr1 ENSMUSG00000022761 1984 0.909 - 0.909 - - - - leucine-zipper-like transcriptional regulator, 1 [Source:MGI Symbol;Acc:MGI:1914113]
46. Ccdc14 ENSMUSG00000022833 847 0.909 - 0.909 - - - - coiled-coil domain containing 14 [Source:MGI Symbol;Acc:MGI:2443448]
47. Pdia5 ENSMUSG00000022844 1610 0.909 - 0.909 - - - - protein disulfide isomerase associated 5 [Source:MGI Symbol;Acc:MGI:1919849]
48. Dlg3 ENSMUSG00000000881 1078 0.908 - 0.908 - - - - discs large MAGUK scaffold protein 3 [Source:MGI Symbol;Acc:MGI:1888986]
49. Eral1 ENSMUSG00000020832 1059 0.907 - 0.907 - - - - Era (G-protein)-like 1 (E. coli) [Source:MGI Symbol;Acc:MGI:1889295]
50. Fam172a ENSMUSG00000064138 1125 0.907 - 0.907 - - - - family with sequence similarity 172, member A [Source:MGI Symbol;Acc:MGI:1915925]
51. Psap ENSMUSG00000004207 3964 0.907 - 0.907 - - - - prosaposin [Source:MGI Symbol;Acc:MGI:97783]
52. Rad18 ENSMUSG00000030254 1472 0.907 - 0.907 - - - - RAD18 E3 ubiquitin protein ligase [Source:MGI Symbol;Acc:MGI:1890476]
53. Psmc5 ENSMUSG00000020708 2865 0.907 - 0.907 - - - - protease (prosome, macropain) 26S subunit, ATPase 5 [Source:MGI Symbol;Acc:MGI:105047]
54. Ap4s1 ENSMUSG00000020955 1726 0.907 - 0.907 - - - - adaptor-related protein complex AP-4, sigma 1 [Source:MGI Symbol;Acc:MGI:1337065]
55. Mlxip ENSMUSG00000038342 1323 0.907 - 0.907 - - - - MLX interacting protein [Source:MGI Symbol;Acc:MGI:2141183]
56. Sft2d3 ENSMUSG00000044982 847 0.906 - 0.906 - - - - SFT2 domain containing 3 [Source:MGI Symbol;Acc:MGI:1914408]
57. Mospd3 ENSMUSG00000037221 1127 0.906 - 0.906 - - - - motile sperm domain containing 3 [Source:MGI Symbol;Acc:MGI:1916179]
58. Tmem107 ENSMUSG00000020895 490 0.906 - 0.906 - - - - transmembrane protein 107 [Source:MGI Symbol;Acc:MGI:1914160]
59. Otud4 ENSMUSG00000036990 3016 0.905 - 0.905 - - - - OTU domain containing 4 [Source:MGI Symbol;Acc:MGI:1098801]
60. Aftph ENSMUSG00000049659 672 0.905 - 0.905 - - - - aftiphilin [Source:MGI Symbol;Acc:MGI:1923012]
61. Tmem230 ENSMUSG00000027341 995 0.904 - 0.904 - - - - transmembrane protein 230 [Source:MGI Symbol;Acc:MGI:1917862]
62. Ptpra ENSMUSG00000027303 1976 0.904 - 0.904 - - - - protein tyrosine phosphatase, receptor type, A [Source:MGI Symbol;Acc:MGI:97808]
63. Dus3l ENSMUSG00000007603 1071 0.904 - 0.904 - - - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2147092]
64. Fdx1l ENSMUSG00000079677 1163 0.903 - 0.903 - - - - ferredoxin 1-like [Source:MGI Symbol;Acc:MGI:1915415]
65. Gne ENSMUSG00000028479 439 0.903 - 0.903 - - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:MGI Symbol;Acc:MGI:1354951]
66. Zfp202 ENSMUSG00000025602 368 0.902 - 0.902 - - - - zinc finger protein 202 [Source:MGI Symbol;Acc:MGI:1933401]
67. Fam98b ENSMUSG00000027349 5757 0.902 - 0.902 - - - - family with sequence similarity 98, member B [Source:MGI Symbol;Acc:MGI:1915465]
68. Gm25190 ENSMUSG00000093404 417 0.901 - 0.901 - - - - predicted gene, 25190 [Source:MGI Symbol;Acc:MGI:5454967]
69. Cacna1h ENSMUSG00000024112 564 0.901 - 0.901 - - - - calcium channel, voltage-dependent, T type, alpha 1H subunit [Source:MGI Symbol;Acc:MGI:1928842]
70. Fbxl3 ENSMUSG00000022124 1375 0.9 - 0.900 - - - - F-box and leucine-rich repeat protein 3 [Source:MGI Symbol;Acc:MGI:1354702]
71. Scn8a ENSMUSG00000023033 445 0.9 - 0.900 - - - - sodium channel, voltage-gated, type VIII, alpha [Source:MGI Symbol;Acc:MGI:103169]
72. Osbpl1a ENSMUSG00000044252 1204 0.899 - 0.899 - - - - oxysterol binding protein-like 1A [Source:MGI Symbol;Acc:MGI:1927551]
73. Gm15800 4388 0.899 - 0.899 - - - - predicted gene 15800, transcript variant X9
74. Stra6 ENSMUSG00000032327 3061 0.899 - 0.899 - - - - stimulated by retinoic acid gene 6 [Source:MGI Symbol;Acc:MGI:107742]
75. Foxj2 ENSMUSG00000003154 307 0.899 - 0.899 - - - - forkhead box J2 [Source:MGI Symbol;Acc:MGI:1926805]
76. Trim56 ENSMUSG00000043279 682 0.899 - 0.899 - - - - tripartite motif-containing 56 [Source:MGI Symbol;Acc:MGI:2685298]
77. Dhx29 ENSMUSG00000042426 5404 0.899 - 0.899 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 29 [Source:MGI Symbol;Acc:MGI:2145374]
78. Supv3l1 ENSMUSG00000020079 1194 0.899 - 0.899 - - - - suppressor of var1, 3-like 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2441711]
79. Brms1l ENSMUSG00000012076 1022 0.898 - 0.898 - - - - breast cancer metastasis-suppressor 1-like [Source:MGI Symbol;Acc:MGI:1196337]
80. Itprip 468 0.898 - 0.898 - - - - inositol 1,4,5-triphosphate receptor interacting protein, transcript variant X2
81. Katnal2 ENSMUSG00000025420 261 0.898 - 0.898 - - - - katanin p60 subunit A-like 2 [Source:MGI Symbol;Acc:MGI:1924234]
82. Cbx5 ENSMUSG00000009575 10784 0.898 - 0.898 - - - - chromobox 5 [Source:MGI Symbol;Acc:MGI:109372]
83. Zfp511 ENSMUSG00000025470 527 0.898 - 0.898 - - - - zinc finger protein 511 [Source:MGI Symbol;Acc:MGI:1917002]
84. Lpar6 ENSMUSG00000033446 911 0.898 - 0.898 - - - - lysophosphatidic acid receptor 6 [Source:MGI Symbol;Acc:MGI:1914418]
85. Dgcr2 ENSMUSG00000003166 2815 0.897 - 0.897 - - - - DiGeorge syndrome critical region gene 2 [Source:MGI Symbol;Acc:MGI:892866]
86. Tlr3 ENSMUSG00000031639 152 0.897 - 0.897 - - - - toll-like receptor 3 [Source:MGI Symbol;Acc:MGI:2156367]
87. Cfp ENSMUSG00000001128 267 0.897 - 0.897 - - - - complement factor properdin [Source:MGI Symbol;Acc:MGI:97545]
88. Ikbip ENSMUSG00000019975 1144 0.896 - 0.896 - - - - IKBKB interacting protein [Source:MGI Symbol;Acc:MGI:1914704]
89. Tanc2 ENSMUSG00000053580 1154 0.896 - 0.896 - - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 [Source:MGI Symbol;Acc:MGI:2444121]
90. Ppapdc1b Ppapdc1b 807 0.895 - 0.895 - - - -
91. Snca ENSMUSG00000025889 420 0.894 - 0.894 - - - - synuclein, alpha [Source:MGI Symbol;Acc:MGI:1277151]
92. Pms2 ENSMUSG00000079109 883 0.894 - 0.894 - - - - PMS1 homolog2, mismatch repair system component [Source:MGI Symbol;Acc:MGI:104288]
93. Sec24b ENSMUSG00000001052 1508 0.893 - 0.893 - - - - Sec24 related gene family, member B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2139764]
94. Ppp1r9b ENSMUSG00000038976 4099 0.893 - 0.893 - - - - protein phosphatase 1, regulatory subunit 9B [Source:MGI Symbol;Acc:MGI:2387581]
95. Bcar3 ENSMUSG00000028121 1174 0.893 - 0.893 - - - - breast cancer anti-estrogen resistance 3 [Source:MGI Symbol;Acc:MGI:1352501]
96. Kcnq5 ENSMUSG00000028033 573 0.889 - 0.889 - - - - potassium voltage-gated channel, subfamily Q, member 5 [Source:MGI Symbol;Acc:MGI:1924937]
97. Col11a1 ENSMUSG00000027966 2373 0.889 - 0.889 - - - - collagen, type XI, alpha 1 [Source:MGI Symbol;Acc:MGI:88446]
98. Dync1i2 ENSMUSG00000027012 17607 0.888 - 0.888 - - - - dynein cytoplasmic 1 intermediate chain 2 [Source:MGI Symbol;Acc:MGI:107750]
99. Ccdc114 ENSMUSG00000040189 1200 0.887 - 0.887 - - - - coiled-coil domain containing 114 [Source:MGI Symbol;Acc:MGI:2446120]
100. Pnp ENSMUSG00000115338 3740 0.887 - 0.887 - - - - purine-nucleoside phosphorylase [Source:MGI Symbol;Acc:MGI:97365]

There are 867 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA