Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Sst

Gene Name Gene ID Reads Annotation
Sst ENSMUSG00000004366 517 somatostatin [Source:MGI Symbol;Acc:MGI:98326]







Genes with expression patterns similar to Sst

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Sst ENSMUSG00000004366 517 6 1.000 1.000 1.000 1.000 1.000 1.000 somatostatin [Source:MGI Symbol;Acc:MGI:98326]
2. RP24-312G4.2 RP24-312G4.2 350 4.033 - 0.703 0.773 0.903 0.743 0.911
3. Ntrk1 ENSMUSG00000028072 70 3.289 - - 0.752 0.842 0.877 0.818 neurotrophic tyrosine kinase, receptor, type 1 [Source:MGI Symbol;Acc:MGI:97383]
4. Rgs4 ENSMUSG00000038530 539 3.232 - - 0.701 0.915 0.858 0.758 regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
5. Hmx1 ENSMUSG00000067438 72 3.222 - - 0.906 0.723 0.753 0.840 H6 homeobox 1 [Source:MGI Symbol;Acc:MGI:107178]
6. Npr2 ENSMUSG00000028469 946 3.12 - - 0.794 0.816 0.785 0.725 natriuretic peptide receptor 2 [Source:MGI Symbol;Acc:MGI:97372]
7. Lbx1 ENSMUSG00000025216 160 3.072 0.802 - 0.734 - 0.799 0.737 ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867]
8. Thsd7b ENSMUSG00000042581 91 3.036 - - 0.727 0.781 0.802 0.726 thrombospondin, type I, domain containing 7B [Source:MGI Symbol;Acc:MGI:2443925]
9. Neurod1 ENSMUSG00000034701 1390 2.718 - - - 0.916 0.888 0.914 neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
10. Ppp1r1c ENSMUSG00000034683 286 2.714 - - - 0.941 0.926 0.847 protein phosphatase 1, regulatory inhibitor subunit 1C [Source:MGI Symbol;Acc:MGI:1923185]
11. Grm2 ENSMUSG00000023192 147 2.606 - - - 0.890 0.825 0.891 glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
12. D930028M14Rik ENSMUSG00000074274 452 2.454 - - - 0.833 0.743 0.878 RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
13. Ppp1r17 ENSMUSG00000002930 374 2.441 - - - 0.904 0.718 0.819 protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
14. Tlx3 ENSMUSG00000040610 161 2.425 - - - 0.816 0.722 0.887 T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209]
15. Scube2 ENSMUSG00000007279 406 2.186 0.746 0.719 - 0.721 - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
16. Pou4f3 ENSMUSG00000024497 58 1.729 - - - 0.883 0.846 - POU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523]
17. Gbx1 ENSMUSG00000067724 16 1.707 - - 0.911 - - 0.796 gastrulation brain homeobox 1 [Source:MGI Symbol;Acc:MGI:95667]
18. Mreg ENSMUSG00000039395 397 1.685 - - - - 0.888 0.797 melanoregulin [Source:MGI Symbol;Acc:MGI:2151839]
19. Robo3 ENSMUSG00000032128 389 1.624 - 0.767 0.857 - - - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
20. Cdhr1 ENSMUSG00000021803 79 1.565 - - - - 0.859 0.706 cadherin-related family member 1 [Source:MGI Symbol;Acc:MGI:2157782]
21. Wnt7b ENSMUSG00000022382 367 1.557 - - - 0.793 0.764 - wingless-type MMTV integration site family, member 7B [Source:MGI Symbol;Acc:MGI:98962]
22. Pax6 ENSMUSG00000027168 2751 1.554 0.735 - - 0.819 - - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
23. Skor1 ENSMUSG00000022245 61 1.547 0.840 - 0.707 - - - SKI family transcriptional corepressor 1 [Source:MGI Symbol;Acc:MGI:2443473]
24. Kcnmb2 ENSMUSG00000037610 111 1.543 - - - 0.743 0.800 - potassium large conductance calcium-activated channel, subfamily M, beta member 2 [Source:MGI Symbol;Acc:MGI:1919663]
25. Frzb ENSMUSG00000027004 1088 1.536 - - - 0.810 0.726 - frizzled-related protein [Source:MGI Symbol;Acc:MGI:892032]
26. Nhlh1 ENSMUSG00000051251 2017 1.532 - - - 0.797 - 0.735 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
27. Bhlhe22 ENSMUSG00000025128 194 1.529 0.718 - - 0.811 - - basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]
28. Ppp1r14a ENSMUSG00000037166 745 1.524 - - 0.743 0.781 - - protein phosphatase 1, regulatory inhibitor subunit 14A [Source:MGI Symbol;Acc:MGI:1931139]
29. Syt13 ENSMUSG00000027220 679 1.519 - - - 0.806 0.713 - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
30. Cadm1 ENSMUSG00000032076 15203 1.515 - - - 0.780 0.735 - cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
31. Lect1 122 1.514 - - 0.743 0.771 - - leukocyte cell derived chemotaxin 1, transcript variant X3
32. Sox10 ENSMUSG00000033006 4908 1.49 0.787 0.703 - - - - SRY (sex determining region Y)-box 10 [Source:MGI Symbol;Acc:MGI:98358]
33. Arc ENSMUSG00000022602 25 0.957 - - 0.957 - - - activity regulated cytoskeletal-associated protein [Source:MGI Symbol;Acc:MGI:88067]
34. Klhl1 ENSMUSG00000022076 8 0.923 - - 0.923 - - - kelch-like 1 [Source:MGI Symbol;Acc:MGI:2136335]
35. Hes3 ENSMUSG00000028946 73 0.911 - - 0.911 - - - hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
36. Gm15457 ENSMUSG00000087374 23 0.9 - - 0.900 - - - predicted gene 15457 [Source:MGI Symbol;Acc:MGI:3705190]
37. Sox21 ENSMUSG00000061517 464 0.887 0.887 - - - - - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
38. Slc32a1 ENSMUSG00000037771 59 0.875 - - 0.875 - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:MGI Symbol;Acc:MGI:1194488]
39. Pou4f1 ENSMUSG00000048349 61 0.874 - - 0.874 - - - POU domain, class 4, transcription factor 1 [Source:MGI Symbol;Acc:MGI:102525]
40. Gm17678 Gm17678 2 0.864 - - 0.864 - - -
41. Shox2 ENSMUSG00000027833 200 0.862 - - - 0.862 - - short stature homeobox 2 [Source:MGI Symbol;Acc:MGI:1201673]
42. Lamp5 ENSMUSG00000027270 112 0.859 - - 0.859 - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
43. Slc22a6 ENSMUSG00000024650 8 0.856 - - - - - 0.856 solute carrier family 22 (organic anion transporter), member 6 [Source:MGI Symbol;Acc:MGI:892001]
44. RP24-351J24.2 RP24-351J24.2 8 0.855 - - 0.855 - - -
45. Gm4258 ENSMUSG00000098243 99 0.835 - - 0.835 - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
46. Zic3 ENSMUSG00000067860 549 0.83 - 0.830 - - - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
47. 4933427I04Rik ENSMUSG00000073761 19 0.828 - - 0.828 - - - Riken cDNA 4933427I04 gene [Source:MGI Symbol;Acc:MGI:3613760]
48. Chadl ENSMUSG00000063765 4 0.825 - - - - - 0.825 chondroadherin-like [Source:MGI Symbol;Acc:MGI:3036284]
49. Ttll7 ENSMUSG00000036745 254 0.818 - - - - - 0.818 tubulin tyrosine ligase-like family, member 7 [Source:MGI Symbol;Acc:MGI:1918142]
50. Sp8 ENSMUSG00000048562 219 0.817 - - - 0.817 - - trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
51. 2610034M16Rik 2610034M16Rik 71 0.814 0.814 - - - - -
52. Gm12328 ENSMUSG00000081552 8 0.809 - - - - - 0.809 predicted gene 12328 [Source:MGI Symbol;Acc:MGI:3651322]
53. Ptprr ENSMUSG00000020151 26 0.806 - - 0.806 - - - protein tyrosine phosphatase, receptor type, R [Source:MGI Symbol;Acc:MGI:109559]
54. Rab39 ENSMUSG00000055069 26 0.805 - - 0.805 - - - RAB39, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:2442855]
55. Dmrt3 ENSMUSG00000042372 26 0.8 - - 0.800 - - - doublesex and mab-3 related transcription factor 3 [Source:MGI Symbol;Acc:MGI:2449470]
56. Elavl4 ENSMUSG00000028546 6084 0.78 - - - 0.780 - - ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
57. Fstl5 ENSMUSG00000034098 64 0.773 - - - - - 0.773 follistatin-like 5 [Source:MGI Symbol;Acc:MGI:2442179]
58. Evx1 ENSMUSG00000005503 33 0.767 - - 0.767 - - - even-skipped homeobox 1 [Source:MGI Symbol;Acc:MGI:95461]
59. Sox3 ENSMUSG00000045179 1137 0.765 0.765 - - - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
60. Gm26638 ENSMUSG00000097563 57 0.764 - - - 0.764 - - predicted gene, 26638 [Source:MGI Symbol;Acc:MGI:5477132]
61. Gm16551 ENSMUSG00000066477 147 0.762 - - - - - 0.762 predicted gene 16551 [Source:MGI Symbol;Acc:MGI:4414971]
62. Fhdc1 ENSMUSG00000041842 46 0.76 - 0.760 - - - - FH2 domain containing 1 [Source:MGI Symbol;Acc:MGI:2684972]
63. Dbx1 ENSMUSG00000030507 205 0.753 - - - 0.753 - - developing brain homeobox 1 [Source:MGI Symbol;Acc:MGI:94867]
64. Nrn1 ENSMUSG00000039114 123 0.752 - - - - - 0.752 neuritin 1 [Source:MGI Symbol;Acc:MGI:1915654]
65. Ccdc177 ENSMUSG00000062961 159 0.75 - - 0.750 - - - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
66. Sox1 ENSMUSG00000096014 349 0.748 0.748 - - - - - SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]
67. Atl1 ENSMUSG00000021066 485 0.748 - - - 0.748 - - atlastin GTPase 1 [Source:MGI Symbol;Acc:MGI:1921241]
68. Eya2 ENSMUSG00000017897 263 0.748 - - 0.748 - - - EYA transcriptional coactivator and phosphatase 2 [Source:MGI Symbol;Acc:MGI:109341]
69. 2310065F04Rik ENSMUSG00000087410 10 0.745 - - 0.745 - - - RIKEN cDNA 2310065F04 gene [Source:MGI Symbol;Acc:MGI:1921434]
70. Fam181a ENSMUSG00000096753 73 0.744 - - 0.744 - - - family with sequence similarity 181, member A [Source:MGI Symbol;Acc:MGI:3647570]
71. Lamc3 ENSMUSG00000026840 198 0.743 - 0.743 - - - - laminin gamma 3 [Source:MGI Symbol;Acc:MGI:1344394]
72. Slc25a48 ENSMUSG00000021509 9 0.741 - 0.741 - - - - solute carrier family 25, member 48 [Source:MGI Symbol;Acc:MGI:2145373]
73. Otp ENSMUSG00000021685 170 0.74 - - 0.740 - - - orthopedia homeobox [Source:MGI Symbol;Acc:MGI:99835]
74. Rad51ap2 ENSMUSG00000086022 8 0.74 0.740 - - - - - RAD51 associated protein 2 [Source:MGI Symbol;Acc:MGI:3644580]
75. Jakmip3 ENSMUSG00000056856, ENSMUSG00000111614 37 0.739 0.739 - - - - - janus kinase and microtubule interacting protein 3 [Source:MGI Symbol;Acc:MGI:1921254]
76. Pcdh8 ENSMUSG00000036422 452 0.738 - - 0.738 - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
77. Lhx5 ENSMUSG00000029595 102 0.738 - - 0.738 - - - LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
78. Syt2 ENSMUSG00000026452 261 0.737 - - - - - 0.737 synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666]
79. Foxb1 ENSMUSG00000059246 293 0.737 0.737 - - - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
80. Tmsb4x ENSMUSG00000049775 61014 0.734 - - - 0.734 - - thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
81. Fgf14 ENSMUSG00000025551 29 0.734 0.734 - - - - - fibroblast growth factor 14 [Source:MGI Symbol;Acc:MGI:109189]
82. 2610035F20Rik ENSMUSG00000085555 139 0.734 - - 0.734 - - - RIKEN cDNA 2610035F20 gene [Source:MGI Symbol;Acc:MGI:1916498]
83. Chrna3 ENSMUSG00000032303 294 0.734 0.734 - - - - - cholinergic receptor, nicotinic, alpha polypeptide 3 [Source:MGI Symbol;Acc:MGI:87887]
84. Insm1 ENSMUSG00000068154 480 0.733 - - - 0.733 - - insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
85. Lyzl4 ENSMUSG00000032530 5 0.731 - - 0.731 - - - lysozyme-like 4 [Source:MGI Symbol;Acc:MGI:1916282]
86. Gm13935 ENSMUSG00000083320 6 0.731 - - 0.731 - - - predicted gene 13935 [Source:MGI Symbol;Acc:MGI:3651886]
87. Gng3 ENSMUSG00000071658 2104 0.731 - - - 0.731 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
88. Fam171b ENSMUSG00000048388 2388 0.727 - - - 0.727 - - family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]
89. Gsx1 ENSMUSG00000053129 137 0.724 - 0.724 - - - - GS homeobox 1 [Source:MGI Symbol;Acc:MGI:95842]
90. Tlx2 ENSMUSG00000068327 216 0.724 - - - 0.724 - - T cell leukemia, homeobox 2 [Source:MGI Symbol;Acc:MGI:1350935]
91. Prdm12 ENSMUSG00000079466 202 0.721 0.721 - - - - - PR domain containing 12 [Source:MGI Symbol;Acc:MGI:2685844]
92. Foxd3 ENSMUSG00000067261, ENSMUSG00000116152 168 0.719 0.719 - - - - - forkhead box D3 [Source:MGI Symbol;Acc:MGI:1347473]
93. Ednrb ENSMUSG00000022122 1909 0.714 - - - 0.714 - - endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
94. Neurog1 ENSMUSG00000048904 327 0.713 - - - 0.713 - - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
95. Cdk5r2 ENSMUSG00000090071 67 0.713 - 0.713 - - - - cyclin-dependent kinase 5, regulatory subunit 2 (p39) [Source:MGI Symbol;Acc:MGI:1330828]
96. Avil ENSMUSG00000025432 14 0.71 - 0.710 - - - - advillin [Source:MGI Symbol;Acc:MGI:1333798]
97. Pcsk1 ENSMUSG00000021587 20 0.709 - - - - - 0.709 proprotein convertase subtilisin/kexin type 1 [Source:MGI Symbol;Acc:MGI:97511]
98. Phyhipl ENSMUSG00000037747 636 0.709 - - 0.709 - - - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
99. Coro2a ENSMUSG00000028337 208 0.709 - - - 0.709 - - coronin, actin binding protein 2A [Source:MGI Symbol;Acc:MGI:1345966]
100. Sh3rf3 ENSMUSG00000037990 48 0.708 - - - 0.708 - - SH3 domain containing ring finger 3 [Source:MGI Symbol;Acc:MGI:2444637]

There are 10 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA