Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ssr1

Gene Name Gene ID Reads Annotation
Ssr1 ENSMUSG00000021427 10103 signal sequence receptor, alpha [Source:MGI Symbol;Acc:MGI:105082]







Genes with expression patterns similar to Ssr1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ssr1 ENSMUSG00000021427 10103 5 1.000 1.000 - 1.000 1.000 1.000 signal sequence receptor, alpha [Source:MGI Symbol;Acc:MGI:105082]
2. Cnnm3 ENSMUSG00000001138 1820 1.665 0.827 0.838 - - - - cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
3. Snrpa1 ENSMUSG00000030512 3270 1.655 0.833 0.822 - - - - small nuclear ribonucleoprotein polypeptide A' [Source:MGI Symbol;Acc:MGI:1916231]
4. Vps28 ENSMUSG00000115987 3187 1.627 0.811 0.816 - - - - vacuolar protein sorting 28 [Source:MGI Symbol;Acc:MGI:1914164]
5. Tmed10 ENSMUSG00000021248 13770 1.587 0.793 0.794 - - - - transmembrane p24 trafficking protein 10 [Source:MGI Symbol;Acc:MGI:1915831]
6. Plekha1 ENSMUSG00000040268 3807 1.538 0.831 0.707 - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:MGI Symbol;Acc:MGI:2442213]
7. Srsf6 ENSMUSG00000016921 23712 0.944 0.944 - - - - - serine/arginine-rich splicing factor 6 [Source:MGI Symbol;Acc:MGI:1915246]
8. Nhp2 ENSMUSG00000001056 4557 0.927 - 0.927 - - - - NHP2 ribonucleoprotein [Source:MGI Symbol;Acc:MGI:1098547]
9. Chd7 ENSMUSG00000041235 7625 0.924 0.924 - - - - - chromodomain helicase DNA binding protein 7 [Source:MGI Symbol;Acc:MGI:2444748]
10. Canx ENSMUSG00000020368 14412 0.922 0.922 - - - - - calnexin [Source:MGI Symbol;Acc:MGI:88261]
11. Ssbp2 ENSMUSG00000003992 5516 0.913 0.913 - - - - - single-stranded DNA binding protein 2 [Source:MGI Symbol;Acc:MGI:1914220]
12. Mapk1 ENSMUSG00000063358 8354 0.894 - 0.894 - - - - mitogen-activated protein kinase 1 [Source:MGI Symbol;Acc:MGI:1346858]
13. Camta1 ENSMUSG00000014592 3380 0.892 - 0.892 - - - - calmodulin binding transcription activator 1 [Source:MGI Symbol;Acc:MGI:2140230]
14. Tmbim6 ENSMUSG00000023010 7081 0.891 0.891 - - - - - transmembrane BAX inhibitor motif containing 6 [Source:MGI Symbol;Acc:MGI:99682]
15. Cdc73 ENSMUSG00000026361 2326 0.888 - 0.888 - - - - cell division cycle 73, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2384876]
16. Rabl6 ENSMUSG00000015087 1555 0.884 - 0.884 - - - - RAB, member RAS oncogene family-like 6 [Source:MGI Symbol;Acc:MGI:2442633]
17. Amer1 ENSMUSG00000050332 1954 0.879 - 0.879 - - - - APC membrane recruitment 1 [Source:MGI Symbol;Acc:MGI:1919595]
18. Fam115a Fam115a 5095 0.876 - 0.876 - - - -
19. Nsmce1 ENSMUSG00000030750 3511 0.874 - 0.874 - - - - NSE1 homolog, SMC5-SMC6 complex component [Source:MGI Symbol;Acc:MGI:1914961]
20. Rdx ENSMUSG00000032050 8812 0.873 - 0.873 - - - - radixin [Source:MGI Symbol;Acc:MGI:97887]
21. Zfp518a ENSMUSG00000049164 1198 0.873 - 0.873 - - - - zinc finger protein 518A [Source:MGI Symbol;Acc:MGI:1919922]
22. Mrps14 ENSMUSG00000058267 4994 0.872 0.872 - - - - - mitochondrial ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:1928141]
23. Zfp639 ENSMUSG00000027667 1604 0.871 - 0.871 - - - - zinc finger protein 639 [Source:MGI Symbol;Acc:MGI:1915028]
24. Ict1 1397 0.87 - 0.870 - - - - immature colon carcinoma transcript 1, transcript variant X1
25. Gm9385 ENSMUSG00000080848 4881 0.868 0.868 - - - - - predicted pseudogene 9385 [Source:MGI Symbol;Acc:MGI:3646182]
26. Bet1l ENSMUSG00000025484 4660 0.868 - 0.868 - - - - Bet1 golgi vesicular membrane trafficking protein like [Source:MGI Symbol;Acc:MGI:1913128]
27. Kidins220 ENSMUSG00000036333 1925 0.866 - 0.866 - - - - kinase D-interacting substrate 220 [Source:MGI Symbol;Acc:MGI:1924730]
28. Rras2 ENSMUSG00000055723 3015 0.866 - 0.866 - - - - related RAS viral (r-ras) oncogene 2 [Source:MGI Symbol;Acc:MGI:1914172]
29. Skiv2l ENSMUSG00000040356 1057 0.863 - 0.863 - - - - superkiller viralicidic activity 2-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1099835]
30. Rufy2 ENSMUSG00000020070 1150 0.862 - 0.862 - - - - RUN and FYVE domain-containing 2 [Source:MGI Symbol;Acc:MGI:1917682]
31. Ube3c ENSMUSG00000039000 1417 0.862 - 0.862 - - - - ubiquitin protein ligase E3C [Source:MGI Symbol;Acc:MGI:2140998]
32. Bola3 ENSMUSG00000045160 1800 0.862 - 0.862 - - - - bolA-like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:1925903]
33. Tpr ENSMUSG00000006005 4170 0.861 - 0.861 - - - - translocated promoter region, nuclear basket protein [Source:MGI Symbol;Acc:MGI:1922066]
34. Pank2 ENSMUSG00000037514 1182 0.86 - 0.860 - - - - pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
35. Rian ENSMUSG00000097451, ENSMUSG00000107391 6847 0.86 0.860 - - - - - RNA imprinted and accumulated in nucleus [Source:MGI Symbol;Acc:MGI:1922995]
36. Phf17 Phf17 2938 0.858 - 0.858 - - - -
37. Bud31 ENSMUSG00000038722 1038 0.857 - 0.857 - - - - BUD31 homolog [Source:MGI Symbol;Acc:MGI:2141291]
38. Lphn2 Lphn2 6084 0.857 - 0.857 - - - -
39. Gtpbp2 ENSMUSG00000023952 1585 0.856 - 0.856 - - - - GTP binding protein 2 [Source:MGI Symbol;Acc:MGI:1860138]
40. Cstf2t ENSMUSG00000053536 5496 0.854 - 0.854 - - - - cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Source:MGI Symbol;Acc:MGI:1932622]
41. Nup37 ENSMUSG00000035351 2174 0.853 - 0.853 - - - - nucleoporin 37 [Source:MGI Symbol;Acc:MGI:1919964]
42. Fmr1 ENSMUSG00000000838 3241 0.853 - 0.853 - - - - fragile X mental retardation 1 [Source:MGI Symbol;Acc:MGI:95564]
43. H2afj ENSMUSG00000060032 2159 0.853 - 0.853 - - - - H2A histone family, member J [Source:MGI Symbol;Acc:MGI:3606192]
44. Bag2 ENSMUSG00000042215 801 0.852 - 0.852 - - - - BCL2-associated athanogene 2 [Source:MGI Symbol;Acc:MGI:1891254]
45. Sgsm2 ENSMUSG00000038351 512 0.852 - 0.852 - - - - small G protein signaling modulator 2 [Source:MGI Symbol;Acc:MGI:2144695]
46. Galk2 ENSMUSG00000027207 1017 0.851 - 0.851 - - - - galactokinase 2 [Source:MGI Symbol;Acc:MGI:1917226]
47. Hoxc6 ENSMUSG00000001661 9818 0.851 0.851 - - - - - homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
48. Mbnl3 ENSMUSG00000036109 298 0.851 - 0.851 - - - - muscleblind like splicing factor 3 [Source:MGI Symbol;Acc:MGI:2444912]
49. Ankrd29 ENSMUSG00000057766 352 0.851 - 0.851 - - - - ankyrin repeat domain 29 [Source:MGI Symbol;Acc:MGI:2687055]
50. Fopnl ENSMUSG00000022677 1745 0.849 - 0.849 - - - - Fgfr1op N-terminal like [Source:MGI Symbol;Acc:MGI:1913336]
51. Peg12 ENSMUSG00000070526 1724 0.849 - 0.849 - - - - paternally expressed 12 [Source:MGI Symbol;Acc:MGI:1351637]
52. Nudt11 ENSMUSG00000073295 757 0.849 - 0.849 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
53. Rgl1 ENSMUSG00000026482 938 0.849 - 0.849 - - - - ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
54. Nsun5 ENSMUSG00000000916 534 0.848 - 0.848 - - - - NOL1/NOP2/Sun domain family, member 5 [Source:MGI Symbol;Acc:MGI:2140844]
55. Uspl1 ENSMUSG00000041264 1822 0.848 - 0.848 - - - - ubiquitin specific peptidase like 1 [Source:MGI Symbol;Acc:MGI:2442342]
56. Gm12088 ENSMUSG00000086707 296 0.847 - 0.847 - - - - predicted gene 12088 [Source:MGI Symbol;Acc:MGI:3650337]
57. Snrpc ENSMUSG00000024217 5601 0.846 0.846 - - - - - U1 small nuclear ribonucleoprotein C [Source:MGI Symbol;Acc:MGI:109489]
58. Zfp120 ENSMUSG00000068134 814 0.846 - 0.846 - - - - zinc finger protein 120 [Source:MGI Symbol;Acc:MGI:1345179]
59. Gskip ENSMUSG00000044715 985 0.846 - 0.846 - - - - GSK3B interacting protein [Source:MGI Symbol;Acc:MGI:1914037]
60. Vamp4 ENSMUSG00000026696 4077 0.845 - 0.845 - - - - vesicle-associated membrane protein 4 [Source:MGI Symbol;Acc:MGI:1858730]
61. Tead2 ENSMUSG00000030796 19439 0.845 0.845 - - - - - TEA domain family member 2 [Source:MGI Symbol;Acc:MGI:104904]
62. Zfc3h1 ENSMUSG00000034163 1104 0.845 - 0.845 - - - - zinc finger, C3H1-type containing [Source:MGI Symbol;Acc:MGI:2446143]
63. Gak ENSMUSG00000062234 3150 0.844 - 0.844 - - - - cyclin G associated kinase [Source:MGI Symbol;Acc:MGI:2442153]
64. Cacfd1 ENSMUSG00000015488 2060 0.844 - 0.844 - - - - calcium channel flower domain containing 1 [Source:MGI Symbol;Acc:MGI:1924317]
65. Coq10b ENSMUSG00000025981 471 0.844 - 0.844 - - - - coenzyme Q10B [Source:MGI Symbol;Acc:MGI:1915126]
66. Tex10 ENSMUSG00000028345 705 0.844 - 0.844 - - - - testis expressed gene 10 [Source:MGI Symbol;Acc:MGI:1344413]
67. Slc9a8 ENSMUSG00000039463 761 0.844 - 0.844 - - - - solute carrier family 9 (sodium/hydrogen exchanger), member 8 [Source:MGI Symbol;Acc:MGI:1924281]
68. Cenpn ENSMUSG00000031756 2208 0.844 - 0.844 - - - - centromere protein N [Source:MGI Symbol;Acc:MGI:1919405]
69. Nid2 ENSMUSG00000021806 452 0.843 - 0.843 - - - - nidogen 2 [Source:MGI Symbol;Acc:MGI:1298229]
70. Plxna3 ENSMUSG00000031398 910 0.843 - 0.843 - - - - plexin A3 [Source:MGI Symbol;Acc:MGI:107683]
71. Leprel2 Leprel2 1004 0.843 - 0.843 - - - -
72. Hspa8 ENSMUSG00000015656 1860 0.843 - 0.843 - - - - heat shock protein 8 [Source:MGI Symbol;Acc:MGI:105384]
73. Prdx1 ENSMUSG00000028691 28315 0.842 0.842 - - - - - peroxiredoxin 1 [Source:MGI Symbol;Acc:MGI:99523]
74. Trim39 ENSMUSG00000045409 968 0.841 - 0.841 - - - - tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]
75. Tmem203 ENSMUSG00000078201 356 0.841 - 0.841 - - - - transmembrane protein 203 [Source:MGI Symbol;Acc:MGI:2443597]
76. Sirpa ENSMUSG00000037902 940 0.841 - 0.841 - - - - signal-regulatory protein alpha [Source:MGI Symbol;Acc:MGI:108563]
77. Pde4dip ENSMUSG00000038170 727 0.84 - 0.840 - - - - phosphodiesterase 4D interacting protein (myomegalin) [Source:MGI Symbol;Acc:MGI:1891434]
78. H3f3a ENSMUSG00000060743 1794 0.84 - 0.840 - - - - H3 histone, family 3A [Source:MGI Symbol;Acc:MGI:1097686]
79. 2310047M10Rik 2310047M10Rik 249 0.84 - 0.840 - - - -
80. Naa16 ENSMUSG00000022020 1204 0.84 - 0.840 - - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:MGI Symbol;Acc:MGI:1914147]
81. Bbs2 ENSMUSG00000031755 976 0.839 - 0.839 - - - - Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
82. 9630033F20Rik 9630033F20Rik 937 0.839 - 0.839 - - - -
83. Mettl2 ENSMUSG00000020691 572 0.838 - 0.838 - - - - methyltransferase like 2 [Source:MGI Symbol;Acc:MGI:1289171]
84. Acy1 ENSMUSG00000023262 490 0.838 - 0.838 - - - - aminoacylase 1 [Source:MGI Symbol;Acc:MGI:87913]
85. Ppp1r9b ENSMUSG00000038976 4099 0.838 0.838 - - - - - protein phosphatase 1, regulatory subunit 9B [Source:MGI Symbol;Acc:MGI:2387581]
86. 5830462I19Rik ENSMUSG00000091102 512 0.838 - 0.838 - - - - RIKEN cDNA 5830462I19 gene [Source:MGI Symbol;Acc:MGI:3642105]
87. Ppm1d ENSMUSG00000020525 1303 0.837 - 0.837 - - - - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
88. Anks1 ENSMUSG00000024219 2498 0.837 - 0.837 - - - - ankyrin repeat and SAM domain containing 1 [Source:MGI Symbol;Acc:MGI:2446180]
89. Mrps25 ENSMUSG00000014551 1972 0.837 0.837 - - - - - mitochondrial ribosomal protein S25 [Source:MGI Symbol;Acc:MGI:1928140]
90. Gramd1a ENSMUSG00000001248 2162 0.837 - 0.837 - - - - GRAM domain containing 1A [Source:MGI Symbol;Acc:MGI:105490]
91. Efemp2 ENSMUSG00000024909 777 0.836 - 0.836 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]
92. Scyl2 ENSMUSG00000069539 1275 0.836 - 0.836 - - - - SCY1-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1289172]
93. Nfatc2ip ENSMUSG00000030722 920 0.835 - 0.835 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
94. Dvl3 ENSMUSG00000003233 353 0.835 - 0.835 - - - - dishevelled segment polarity protein 3 [Source:MGI Symbol;Acc:MGI:108100]
95. Efs ENSMUSG00000022203 645 0.835 - 0.835 - - - - embryonal Fyn-associated substrate [Source:MGI Symbol;Acc:MGI:105311]
96. Dtwd2 ENSMUSG00000024505 830 0.834 0.834 - - - - - DTW domain containing 2 [Source:MGI Symbol;Acc:MGI:1916107]
97. Gm14843 ENSMUSG00000083897 219 0.834 - 0.834 - - - - predicted gene 14843 [Source:MGI Symbol;Acc:MGI:3802062]
98. Zfp354c ENSMUSG00000044807 1644 0.834 - 0.834 - - - - zinc finger protein 354C [Source:MGI Symbol;Acc:MGI:1353621]
99. Ccni ENSMUSG00000063015 12922 0.834 0.834 - - - - - cyclin I [Source:MGI Symbol;Acc:MGI:1341077]
100. Npc1 ENSMUSG00000024413 973 0.834 - 0.834 - - - - NPC intracellular cholesterol transporter 1 [Source:MGI Symbol;Acc:MGI:1097712]

There are 363 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA