Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ssna1

Gene Name Gene ID Reads Annotation
Ssna1 ENSMUSG00000026966 1568 SS nuclear autoantigen 1 [Source:MGI Symbol;Acc:MGI:1915725]







Genes with expression patterns similar to Ssna1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ssna1 ENSMUSG00000026966 1568 6 1.000 1.000 1.000 1.000 1.000 1.000 SS nuclear autoantigen 1 [Source:MGI Symbol;Acc:MGI:1915725]
2. Ralbp1 ENSMUSG00000024096 4172 1.519 - 0.817 0.702 - - - ralA binding protein 1 [Source:MGI Symbol;Acc:MGI:108466]
3. Ccdc12 ENSMUSG00000019659 1494 0.912 - 0.912 - - - - coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
4. Tmem55b 935 0.904 - 0.904 - - - - transmembrane protein 55b, transcript variant X3
5. Flt3 ENSMUSG00000042817 515 0.901 - 0.901 - - - - FMS-like tyrosine kinase 3 [Source:MGI Symbol;Acc:MGI:95559]
6. Corin ENSMUSG00000005220 269 0.897 - 0.897 - - - - corin [Source:MGI Symbol;Acc:MGI:1349451]
7. Hoxc5 ENSMUSG00000022485 1958 0.896 - 0.896 - - - - homeobox C5 [Source:MGI Symbol;Acc:MGI:96196]
8. Tmcc1 ENSMUSG00000030126 2753 0.894 - 0.894 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
9. Ercc4 ENSMUSG00000022545 1268 0.892 - 0.892 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:MGI Symbol;Acc:MGI:1354163]
10. Emc2 ENSMUSG00000022337 2066 0.888 - 0.888 - - - - ER membrane protein complex subunit 2 [Source:MGI Symbol;Acc:MGI:1913986]
11. Fxr2 ENSMUSG00000018765 1650 0.888 - 0.888 - - - - fragile X mental retardation, autosomal homolog 2 [Source:MGI Symbol;Acc:MGI:1346074]
12. Wdr46 ENSMUSG00000024312 449 0.888 - 0.888 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
13. Aldh6a1 ENSMUSG00000021238 522 0.887 - 0.887 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]
14. Larp7 ENSMUSG00000027968 2270 0.886 - 0.886 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
15. Tbl3 ENSMUSG00000040688 1374 0.885 - 0.885 - - - - transducin (beta)-like 3 [Source:MGI Symbol;Acc:MGI:2384863]
16. Uvrag ENSMUSG00000035354 908 0.885 - 0.885 - - - - UV radiation resistance associated gene [Source:MGI Symbol;Acc:MGI:1925860]
17. 9930021J03Rik ENSMUSG00000046138 2964 0.882 - 0.882 - - - - RIKEN cDNA 9930021J03 gene [Source:MGI Symbol;Acc:MGI:2444398]
18. Cars2 ENSMUSG00000056228 492 0.881 - 0.881 - - - - cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
19. Gpbp1 ENSMUSG00000032745 5491 0.881 - 0.881 - - - - GC-rich promoter binding protein 1 [Source:MGI Symbol;Acc:MGI:1920524]
20. Cep55 ENSMUSG00000024989 1620 0.881 - 0.881 - - - - centrosomal protein 55 [Source:MGI Symbol;Acc:MGI:1921357]
21. Dera ENSMUSG00000030225 1240 0.88 - 0.880 - - - - deoxyribose-phosphate aldolase (putative) [Source:MGI Symbol;Acc:MGI:1913762]
22. Gm12942 332 0.88 - 0.880 - - - - predicted gene 12942
23. Wdr74 ENSMUSG00000042729 669 0.878 - 0.878 - - - - WD repeat domain 74 [Source:MGI Symbol;Acc:MGI:2147427]
24. Apoo ENSMUSG00000079508 815 0.878 - 0.878 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
25. Pabpc4l ENSMUSG00000090919 1259 0.878 - 0.878 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
26. Taf5l ENSMUSG00000038697 1439 0.877 - 0.877 - - - - TATA-box binding protein associated factor 5 like [Source:MGI Symbol;Acc:MGI:1919039]
27. Harbi1 ENSMUSG00000027243 348 0.877 - 0.877 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
28. Sccpdh ENSMUSG00000038936 1772 0.877 - 0.877 - - - - saccharopine dehydrogenase (putative) [Source:MGI Symbol;Acc:MGI:1924486]
29. Stk40 ENSMUSG00000042608 1035 0.876 - 0.876 - - - - serine/threonine kinase 40 [Source:MGI Symbol;Acc:MGI:1921428]
30. Atg3 ENSMUSG00000022663 1323 0.876 - 0.876 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
31. Tmem126b ENSMUSG00000030614 743 0.875 - 0.875 - - - - transmembrane protein 126B [Source:MGI Symbol;Acc:MGI:1915722]
32. Osbpl2 ENSMUSG00000039050 960 0.875 - 0.875 - - - - oxysterol binding protein-like 2 [Source:MGI Symbol;Acc:MGI:2442832]
33. Sass6 ENSMUSG00000027959 1229 0.875 - 0.875 - - - - SAS-6 centriolar assembly protein [Source:MGI Symbol;Acc:MGI:1920026]
34. Klhl6 ENSMUSG00000043008 952 0.875 - 0.875 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
35. Ubp1 ENSMUSG00000009741 708 0.873 - 0.873 - - - - upstream binding protein 1 [Source:MGI Symbol;Acc:MGI:104889]
36. Gm25735 ENSMUSG00000092905 617 0.873 - 0.873 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
37. 2610035D17Rik ENSMUSG00000087259 651 0.873 - 0.873 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
38. Suclg2 ENSMUSG00000061838 465 0.872 - 0.872 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
39. Cops8 ENSMUSG00000034432 3968 0.872 - 0.872 - - - - COP9 signalosome subunit 8 [Source:MGI Symbol;Acc:MGI:1915363]
40. Sh3glb2 ENSMUSG00000026860 1046 0.872 - 0.872 - - - - SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
41. Tmem246 ENSMUSG00000039611 866 0.871 - 0.871 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
42. Gm7327 ENSMUSG00000050900 249 0.871 - 0.871 - - - - predicted gene 7327 [Source:MGI Symbol;Acc:MGI:3646274]
43. Smim4 ENSMUSG00000058351 454 0.87 - 0.870 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
44. 9930111J21Rik2 ENSMUSG00000069892 1273 0.87 - 0.870 - - - - RIKEN cDNA 9930111J21 gene 2 [Source:MGI Symbol;Acc:MGI:3711310]
45. 2010111I01Rik ENSMUSG00000021458 591 0.87 - 0.870 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
46. Cd302 ENSMUSG00000060703 214 0.87 - 0.870 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
47. Ap2a1 ENSMUSG00000060279 108 0.869 - 0.869 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
48. Ppp4r4 ENSMUSG00000021209 242 0.869 - 0.869 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
49. Pla2g15 ENSMUSG00000031903 321 0.869 - 0.869 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
50. Ptges3l ENSMUSG00000097487 146 0.869 - 0.869 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
51. Chd9 ENSMUSG00000056608 1536 0.868 - 0.868 - - - - chromodomain helicase DNA binding protein 9 [Source:MGI Symbol;Acc:MGI:1924001]
52. Lonp2 ENSMUSG00000047866 1312 0.868 - 0.868 - - - - lon peptidase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1914137]
53. Rpl27-ps2 ENSMUSG00000082171 89 0.867 - 0.867 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
54. Slc38a3 ENSMUSG00000010064 147 0.866 - 0.866 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
55. Gm26782 ENSMUSG00000097431 428 0.866 - 0.866 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
56. Smpd3 ENSMUSG00000031906 194 0.866 - 0.866 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
57. Tmem26 ENSMUSG00000060044 379 0.866 - 0.866 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
58. Zfp369 ENSMUSG00000021514 1130 0.865 - 0.865 - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
59. Zbtb12 ENSMUSG00000049823 373 0.865 - 0.865 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
60. Rab11fip5 ENSMUSG00000051343 496 0.865 - 0.865 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
61. Pdpr ENSMUSG00000033624 123 0.865 - 0.865 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
62. Zfp61 ENSMUSG00000050605 989 0.865 - 0.865 - - - - zinc finger protein 61 [Source:MGI Symbol;Acc:MGI:99663]
63. Aldh4a1 ENSMUSG00000028737 1176 0.865 - 0.865 - - - - aldehyde dehydrogenase 4 family, member A1 [Source:MGI Symbol;Acc:MGI:2443883]
64. Extl1 ENSMUSG00000028838 63 0.865 - 0.865 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
65. Gmds ENSMUSG00000038372 653 0.864 - 0.864 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
66. Zfp71-rs1 Zfp71-rs1 629 0.864 - 0.864 - - - -
67. Cxxc4 ENSMUSG00000044365 723 0.864 - 0.864 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
68. Frk ENSMUSG00000019779 639 0.864 - 0.864 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
69. Kcnk5 ENSMUSG00000023243 191 0.864 - 0.864 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
70. Ing2 ENSMUSG00000063049 913 0.864 - 0.864 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
71. Ubtd1 ENSMUSG00000025171 336 0.864 - 0.864 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]
72. Cyp27a1 ENSMUSG00000026170 153 0.863 - 0.863 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
73. Cetn4 ENSMUSG00000045031 377 0.863 - 0.863 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
74. Tmem186 ENSMUSG00000043140 711 0.863 - 0.863 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
75. Bckdha ENSMUSG00000060376 653 0.863 - 0.863 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
76. Pom121 ENSMUSG00000053293 574 0.863 - 0.863 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
77. Rbm12b1 ENSMUSG00000046667 331 0.863 - 0.863 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
78. Rhbdf1 ENSMUSG00000020282 1113 0.863 - 0.863 - - - - rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
79. Plekhm1 ENSMUSG00000034247 251 0.863 - 0.863 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
80. Zfp11 ENSMUSG00000051034 218 0.862 - 0.862 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
81. Usp35 ENSMUSG00000035713 112 0.862 - 0.862 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
82. Ccne1 ENSMUSG00000002068 2574 0.862 - 0.862 - - - - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
83. Trim8 ENSMUSG00000025034 1494 0.861 - 0.861 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]
84. Twf2 ENSMUSG00000023277 849 0.861 - 0.861 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
85. Hist1h3c ENSMUSG00000069310 508 0.861 - 0.861 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
86. Gm9790 ENSMUSG00000044330 390 0.861 - 0.861 - - - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
87. Dhx34 ENSMUSG00000006019 240 0.86 - 0.860 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
88. S1pr2 ENSMUSG00000043895 1027 0.859 - 0.859 - - - - sphingosine-1-phosphate receptor 2 [Source:MGI Symbol;Acc:MGI:99569]
89. Pex2 ENSMUSG00000040374 1030 0.858 - 0.858 - - - - peroxisomal biogenesis factor 2 [Source:MGI Symbol;Acc:MGI:107486]
90. Mcc ENSMUSG00000071856 4024 0.858 - 0.858 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
91. 0610009B22Rik ENSMUSG00000007777 752 0.858 - 0.858 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
92. Syne4 ENSMUSG00000019737 724 0.858 - 0.858 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
93. Gm5776 ENSMUSG00000099647 589 0.857 - 0.857 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
94. Sart1 ENSMUSG00000039148 1387 0.857 - 0.857 - - - - squamous cell carcinoma antigen recognized by T cells 1 [Source:MGI Symbol;Acc:MGI:1309453]
95. Cab39 ENSMUSG00000036707 2089 0.857 - 0.857 - - - - calcium binding protein 39 [Source:MGI Symbol;Acc:MGI:107438]
96. Gm25734 Gm25734 104 0.857 - 0.857 - - - -
97. Tmem176a ENSMUSG00000023367 831 0.857 - 0.857 - - - - transmembrane protein 176A [Source:MGI Symbol;Acc:MGI:1913308]
98. Myadm ENSMUSG00000068566, ENSMUSG00000097829 710 0.857 - 0.857 - - - - myeloid-associated differentiation marker [Source:NCBI gene;Acc:50918]
99. Zfp865 ENSMUSG00000074405 1223 0.856 - 0.856 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
100. Car8 ENSMUSG00000041261 286 0.856 - 0.856 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]

There are 349 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA