Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ssbp4

Gene Name Gene ID Reads Annotation
Ssbp4 ENSMUSG00000070003 433 single stranded DNA binding protein 4 [Source:MGI Symbol;Acc:MGI:1924150]







Genes with expression patterns similar to Ssbp4

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ssbp4 ENSMUSG00000070003 433 6 1.000 1.000 1.000 1.000 1.000 1.000 single stranded DNA binding protein 4 [Source:MGI Symbol;Acc:MGI:1924150]
2. Gm9790 ENSMUSG00000044330 390 0.834 - - - 0.834 - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
3. Rps13 ENSMUSG00000090862 73 0.822 - - - 0.822 - - ribosomal protein S13 [Source:MGI Symbol;Acc:MGI:1915302]
4. Fbxo27 ENSMUSG00000037463 111 0.821 - - - 0.821 - - F-box protein 27 [Source:MGI Symbol;Acc:MGI:2685007]
5. Ssc5d ENSMUSG00000035279 115 0.819 - - - - - 0.819 scavenger receptor cysteine rich family, 5 domains [Source:MGI Symbol;Acc:MGI:3606211]
6. Lgr6 ENSMUSG00000042793 34 0.817 - - - 0.817 - - leucine-rich repeat-containing G protein-coupled receptor 6 [Source:MGI Symbol;Acc:MGI:2441805]
7. Adam28 ENSMUSG00000014725 407 0.817 - - - - - 0.817 a disintegrin and metallopeptidase domain 28 [Source:MGI Symbol;Acc:MGI:105988]
8. Hist1h2ab ENSMUSG00000061615 94 0.814 - - - 0.814 - - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
9. Rab25 ENSMUSG00000008601 104 0.814 - - - 0.814 - - RAB25, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858203]
10. Rbm43 ENSMUSG00000036249 142 0.813 - - - 0.813 - - RNA binding motif protein 43 [Source:MGI Symbol;Acc:MGI:1918934]
11. Ano2 ENSMUSG00000038115 19 0.811 - - - 0.811 - - anoctamin 2 [Source:MGI Symbol;Acc:MGI:2387214]
12. Rnf183 ENSMUSG00000063851 14 0.811 - - - 0.811 - - ring finger protein 183 [Source:MGI Symbol;Acc:MGI:1923322]
13. Gm3712 ENSMUSG00000082371 14 0.811 - - - 0.811 - - predicted gene 3712 [Source:MGI Symbol;Acc:MGI:3781888]
14. Dbpht2 ENSMUSG00000029878 15 0.811 - - - 0.811 - - DNA binding protein with his-thr domain [Source:MGI Symbol;Acc:MGI:2679513]
15. Trib3 ENSMUSG00000032715 37 0.81 - - - 0.810 - - tribbles pseudokinase 3 [Source:MGI Symbol;Acc:MGI:1345675]
16. Chrac1 ENSMUSG00000068391 610 0.81 - - - - - 0.810 chromatin accessibility complex 1 [Source:MGI Symbol;Acc:MGI:2135796]
17. Cdk18 ENSMUSG00000026437 118 0.81 - - - 0.810 - - cyclin-dependent kinase 18 [Source:MGI Symbol;Acc:MGI:97518]
18. A730045E13Rik ENSMUSG00000053979 16 0.809 - - - 0.809 - - RIKEN cDNA A730045E13 gene [Source:MGI Symbol;Acc:MGI:2685430]
19. Ccm2l ENSMUSG00000027474 175 0.808 - - - 0.808 - - cerebral cavernous malformation 2-like [Source:MGI Symbol;Acc:MGI:2385159]
20. Gm10093 ENSMUSG00000061062 597 0.806 - - - 0.806 - - predicted pseudogene 10093 [Source:MGI Symbol;Acc:MGI:3704479]
21. Bcmo1 Bcmo1 44 0.805 - - - 0.805 - -
22. Susd2 ENSMUSG00000006342 205 0.805 - - - 0.805 - - sushi domain containing 2 [Source:MGI Symbol;Acc:MGI:1918983]
23. 4933427J07Rik ENSMUSG00000087267 104 0.805 - - - 0.805 - - RIKEN cDNA 4933427J07 gene [Source:MGI Symbol;Acc:MGI:1918470]
24. Rmdn2 ENSMUSG00000036368 115 0.804 - - - 0.804 - - regulator of microtubule dynamics 2 [Source:MGI Symbol;Acc:MGI:2147043]
25. Pramef17 ENSMUSG00000078509 32 0.804 - - - 0.804 - - PRAME family member 17 [Source:MGI Symbol;Acc:MGI:3650199]
26. Star ENSMUSG00000031574 42 0.802 - - - 0.802 - - steroidogenic acute regulatory protein [Source:MGI Symbol;Acc:MGI:102760]
27. Alkbh6 ENSMUSG00000042831 746 0.802 - - - 0.802 - - alkB homolog 6 [Source:MGI Symbol;Acc:MGI:2142037]
28. Lins Lins 913 0.799 - - - 0.799 - -
29. Gm26603 ENSMUSG00000097857 20 0.797 - - - 0.797 - - predicted gene, 26603 [Source:MGI Symbol;Acc:MGI:5477097]
30. Gpr161 ENSMUSG00000040836 49 0.794 - - - 0.794 - - G protein-coupled receptor 161 [Source:MGI Symbol;Acc:MGI:2685054]
31. Letm2 ENSMUSG00000037363 105 0.794 - - - 0.794 - - leucine zipper-EF-hand containing transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:2444979]
32. Gm15708 ENSMUSG00000086894 110 0.788 - - - 0.788 - - predicted gene 15708 [Source:MGI Symbol;Acc:MGI:3783149]
33. Neil2 ENSMUSG00000035121 342 0.784 - - - 0.784 - - nei like 2 (E. coli) [Source:MGI Symbol;Acc:MGI:2686058]
34. 5033428I22Rik ENSMUSG00000097910 203 0.784 - - - 0.784 - - RIKEN cDNA 5033428I22 gene [Source:MGI Symbol;Acc:MGI:1923246]
35. Map7 ENSMUSG00000019996 135 0.784 - - - 0.784 - - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
36. E130311K13Rik ENSMUSG00000048581 4352 0.782 - - - 0.782 - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
37. Mboat1 ENSMUSG00000038732 169 0.78 - - - 0.780 - - membrane bound O-acyltransferase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387184]
38. Synm ENSMUSG00000030554 90 0.78 - - - 0.780 - - synemin, intermediate filament protein [Source:MGI Symbol;Acc:MGI:2661187]
39. Efcab12 ENSMUSG00000030321 63 0.774 - - - 0.774 - - EF-hand calcium binding domain 12 [Source:MGI Symbol;Acc:MGI:2681834]
40. Kntc1 ENSMUSG00000029414 1121 0.771 - - - 0.771 - - kinetochore associated 1 [Source:MGI Symbol;Acc:MGI:2673709]
41. Gpr97 Gpr97 124 0.77 - - - 0.770 - -
42. 4731419I09Rik ENSMUSG00000097004 89 0.77 - - - 0.770 - - RIKEN cDNA 4731419I09 gene [Source:MGI Symbol;Acc:MGI:3704222]
43. Clybl ENSMUSG00000025545 356 0.77 - - - 0.770 - - citrate lyase beta like [Source:MGI Symbol;Acc:MGI:1916884]
44. Cntn1 ENSMUSG00000055022 89 0.77 - - - 0.770 - - contactin 1 [Source:MGI Symbol;Acc:MGI:105980]
45. Gimap9 ENSMUSG00000051124 246 0.769 - - - 0.769 - - GTPase, IMAP family member 9 [Source:MGI Symbol;Acc:MGI:3511744]
46. Car5b ENSMUSG00000031373 107 0.768 - - - 0.768 - - carbonic anhydrase 5b, mitochondrial [Source:MGI Symbol;Acc:MGI:1926249]
47. Arnt ENSMUSG00000015522 777 0.768 - - - - - 0.768 aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
48. Oraov1 ENSMUSG00000031072 415 0.767 - - - 0.767 - - oral cancer overexpressed 1 [Source:MGI Symbol;Acc:MGI:1919534]
49. Trpv2 ENSMUSG00000018507 828 0.763 - - - - - 0.763 transient receptor potential cation channel, subfamily V, member 2 [Source:MGI Symbol;Acc:MGI:1341836]
50. Oxsm ENSMUSG00000021786 115 0.762 - - - 0.762 - - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
51. Ppp1r13b ENSMUSG00000021285 299 0.762 - - - 0.762 - - protein phosphatase 1, regulatory subunit 13B [Source:MGI Symbol;Acc:MGI:1336199]
52. Map2k5 ENSMUSG00000058444 217 0.76 - - - 0.760 - - mitogen-activated protein kinase kinase 5 [Source:MGI Symbol;Acc:MGI:1346345]
53. Gm13771 ENSMUSG00000083832 132 0.759 - - - 0.759 - - predicted gene 13771 [Source:MGI Symbol;Acc:MGI:3650181]
54. Fzd1 ENSMUSG00000044674 1264 0.758 - - - - - 0.758 frizzled class receptor 1 [Source:MGI Symbol;Acc:MGI:1196625]
55. Veph1 ENSMUSG00000027831 101 0.758 - - - 0.758 - - ventricular zone expressed PH domain-containing 1 [Source:MGI Symbol;Acc:MGI:1920039]
56. Amer2 ENSMUSG00000021986 556 0.757 - - - 0.757 - - APC membrane recruitment 2 [Source:MGI Symbol;Acc:MGI:1919375]
57. Rps18-ps3 ENSMUSG00000057657 245 0.757 - - - 0.757 - - ribosomal protein S18, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3642474]
58. Camk1d ENSMUSG00000039145 117 0.754 - - - 0.754 - - calcium/calmodulin-dependent protein kinase ID [Source:MGI Symbol;Acc:MGI:2442190]
59. Ostm1 ENSMUSG00000038280 208 0.753 - - - 0.753 - - osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
60. 2610021A01Rik ENSMUSG00000091474 463 0.753 - - - - - 0.753 RIKEN cDNA 2610021A01 gene [Source:MGI Symbol;Acc:MGI:1922662]
61. Gm15952 ENSMUSG00000085655 100 0.751 - - - 0.751 - - predicted gene 15952 [Source:MGI Symbol;Acc:MGI:3802149]
62. Znrd1as ENSMUSG00000036214 190 0.75 - - - 0.750 - - zinc ribbon domain containing 1, antisense [Source:MGI Symbol;Acc:MGI:1923666]
63. Tmem259 ENSMUSG00000013858 819 0.75 - - - 0.750 - - transmembrane protein 259 [Source:MGI Symbol;Acc:MGI:2177957]
64. Tcte2 ENSMUSG00000038347 342 0.75 - - - - - 0.750 t-complex-associated testis expressed 2 [Source:MGI Symbol;Acc:MGI:98641]
65. Gm10294 Gm10294 147 0.749 - - - 0.749 - -
66. Saal1 ENSMUSG00000006763 2057 0.748 - - - 0.748 - - serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
67. Ranbp17 ENSMUSG00000040594 358 0.748 - - - 0.748 - - RAN binding protein 17 [Source:MGI Symbol;Acc:MGI:1929706]
68. Ddr1 ENSMUSG00000003534 901 0.745 - - - - - 0.745 discoidin domain receptor family, member 1 [Source:MGI Symbol;Acc:MGI:99216]
69. Gm13473 ENSMUSG00000083776 114 0.743 - - - 0.743 - - predicted gene 13473 [Source:MGI Symbol;Acc:MGI:3652338]
70. Ndst1 ENSMUSG00000054008 3007 0.743 - - - - - 0.743 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 [Source:MGI Symbol;Acc:MGI:104719]
71. Chst11 ENSMUSG00000034612 241 0.742 - - - 0.742 - - carbohydrate sulfotransferase 11 [Source:MGI Symbol;Acc:MGI:1927166]
72. Bbs7 ENSMUSG00000037325 296 0.741 - - - 0.741 - - Bardet-Biedl syndrome 7 (human) [Source:MGI Symbol;Acc:MGI:1918742]
73. Tubd1 ENSMUSG00000020513 118 0.741 - - - 0.741 - - tubulin, delta 1 [Source:MGI Symbol;Acc:MGI:1891826]
74. Fam86 Fam86 655 0.741 - - - - - 0.741
75. Zfp53 ENSMUSG00000057409 96 0.739 - - - 0.739 - - zinc finger protein 53 [Source:MGI Symbol;Acc:MGI:99200]
76. Nuak1 ENSMUSG00000020032 540 0.738 - - - 0.738 - - NUAK family, SNF1-like kinase, 1 [Source:MGI Symbol;Acc:MGI:1925226]
77. Slc38a5 ENSMUSG00000031170 364 0.738 - - - 0.738 - - solute carrier family 38, member 5 [Source:MGI Symbol;Acc:MGI:2148066]
78. Hyal3 ENSMUSG00000036091 127 0.738 - - - 0.738 - - hyaluronoglucosaminidase 3 [Source:MGI Symbol;Acc:MGI:1330288]
79. Stk38 ENSMUSG00000024006 2370 0.737 - - - - - 0.737 serine/threonine kinase 38 [Source:MGI Symbol;Acc:MGI:2442572]
80. Nrm ENSMUSG00000059791 1998 0.735 - - - 0.735 - - nurim (nuclear envelope membrane protein) [Source:MGI Symbol;Acc:MGI:2146855]
81. Cxcl13 ENSMUSG00000023078 206 0.733 - - - 0.733 - - chemokine (C-X-C motif) ligand 13 [Source:MGI Symbol;Acc:MGI:1888499]
82. Mcm3ap ENSMUSG00000001150 1073 0.73 - - - - - 0.730 minichromosome maintenance complex component 3 associated protein [Source:MGI Symbol;Acc:MGI:1930089]
83. Sema4a ENSMUSG00000028064 151 0.729 - - - 0.729 - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]
84. Kbtbd8 ENSMUSG00000030031 184 0.729 - - - 0.729 - - kelch repeat and BTB (POZ) domain containing 8 [Source:MGI Symbol;Acc:MGI:2661430]
85. Mbip ENSMUSG00000021028 457 0.728 - - - - - 0.728 MAP3K12 binding inhibitory protein 1 [Source:MGI Symbol;Acc:MGI:1918320]
86. Gm25663 ENSMUSG00000088323 172 0.727 - - - 0.727 - - predicted gene, 25663 [Source:MGI Symbol;Acc:MGI:5455440]
87. Abtb2 ENSMUSG00000032724 647 0.726 - - - 0.726 - - ankyrin repeat and BTB (POZ) domain containing 2 [Source:MGI Symbol;Acc:MGI:2139365]
88. Tsr2 ENSMUSG00000025264 1165 0.724 - - - 0.724 - - TSR2 20S rRNA accumulation [Source:MGI Symbol;Acc:MGI:1916749]
89. 6430590A07Rik ENSMUSG00000097583, ENSMUSG00000116278 241 0.723 - - - 0.723 - - RIKEN cDNA 6430590A07 gene [Source:MGI Symbol;Acc:MGI:3648839]
90. Setd6 ENSMUSG00000031671 620 0.722 - - - 0.722 - - SET domain containing 6 [Source:MGI Symbol;Acc:MGI:1913333]
91. D11Wsu47e ENSMUSG00000041623 414 0.722 - - - - - 0.722 DNA segment, Chr 11, Wayne State University 47, expressed [Source:MGI Symbol;Acc:MGI:106356]
92. Ss18l1 ENSMUSG00000039086 356 0.72 - - - 0.720 - - SS18, nBAF chromatin remodeling complex subunit like 1 [Source:MGI Symbol;Acc:MGI:2444061]
93. Zfp748 ENSMUSG00000095432 393 0.72 - - - 0.720 - - zinc finger protein 748 [Source:MGI Symbol;Acc:MGI:1916455]
94. Slc16a12 ENSMUSG00000009378 53 0.719 - - - 0.719 - - solute carrier family 16 (monocarboxylic acid transporters), member 12 [Source:MGI Symbol;Acc:MGI:2147716]
95. 2900008C10Rik 2900008C10Rik 240 0.719 - - - 0.719 - -
96. Myo1b ENSMUSG00000018417 2574 0.719 - - - - - 0.719 myosin IB [Source:MGI Symbol;Acc:MGI:107752]
97. Fam124b ENSMUSG00000043230 95 0.718 - - - 0.718 - - family with sequence similarity 124, member B [Source:MGI Symbol;Acc:MGI:3026880]
98. Gm10086 ENSMUSG00000060730 2124 0.718 - - - 0.718 - - predicted pseudogene 10086 [Source:MGI Symbol;Acc:MGI:3642342]
99. Polg2 ENSMUSG00000020718 273 0.717 - - - 0.717 - - polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
100. Slc28a3 ENSMUSG00000021553 131 0.715 - - - 0.715 - - solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 [Source:MGI Symbol;Acc:MGI:2137361]

There are 19 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA