Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ssbp1

Gene Name Gene ID Reads Annotation
Ssbp1 ENSMUSG00000029911 720 single-stranded DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1920040]







Genes with expression patterns similar to Ssbp1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ssbp1 ENSMUSG00000029911 720 6 1.000 1.000 1.000 1.000 1.000 1.000 single-stranded DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1920040]
2. Arhgef5 ENSMUSG00000033542 514 0.853 - - - - 0.853 - Rho guanine nucleotide exchange factor (GEF) 5 [Source:MGI Symbol;Acc:MGI:1858952]
3. D230017M19Rik ENSMUSG00000097131 432 0.85 - - - - 0.850 - RIKEN cDNA D230017M19 gene [Source:MGI Symbol;Acc:MGI:2445071]
4. Btbd7 ENSMUSG00000041702 569 0.844 - - - - 0.844 - BTB (POZ) domain containing 7 [Source:MGI Symbol;Acc:MGI:1917858]
5. Nbas ENSMUSG00000020576 308 0.837 - - - - 0.837 - neuroblastoma amplified sequence [Source:MGI Symbol;Acc:MGI:1918419]
6. Tha1 ENSMUSG00000017713 54 0.836 - - - - 0.836 - threonine aldolase 1 [Source:MGI Symbol;Acc:MGI:1919026]
7. Zfp112 ENSMUSG00000052675 56 0.835 - - - - 0.835 - zinc finger protein 112 [Source:MGI Symbol;Acc:MGI:1929115]
8. Slitrk4 ENSMUSG00000046699 163 0.835 - - - - 0.835 - SLIT and NTRK-like family, member 4 [Source:MGI Symbol;Acc:MGI:2442509]
9. Fga ENSMUSG00000028001 637 0.835 - - - - 0.835 - fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
10. Vmac ENSMUSG00000054723 731 0.835 - - - - 0.835 - vimentin-type intermediate filament associated coiled-coil protein [Source:MGI Symbol;Acc:MGI:2146912]
11. Chac2 ENSMUSG00000020309 171 0.834 - - - - 0.834 - ChaC, cation transport regulator 2 [Source:MGI Symbol;Acc:MGI:1915294]
12. Pianp ENSMUSG00000030329 98 0.833 - - - - 0.833 - PILR alpha associated neural protein [Source:MGI Symbol;Acc:MGI:2441908]
13. Reg3a ENSMUSG00000079516 24 0.833 - - - - 0.833 - regenerating islet-derived 3 alpha [Source:MGI Symbol;Acc:MGI:109408]
14. Syt6 ENSMUSG00000027849 95 0.833 - - - - 0.833 - synaptotagmin VI [Source:MGI Symbol;Acc:MGI:1859544]
15. Egfem1 ENSMUSG00000063600 71 0.833 - - - - 0.833 - EGF-like and EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:1922990]
16. Zzef1 ENSMUSG00000055670 953 0.833 - - - - 0.833 - zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
17. Saa4 ENSMUSG00000040017 48 0.833 - - - - 0.833 - serum amyloid A 4 [Source:MGI Symbol;Acc:MGI:98224]
18. Gm26945 ENSMUSG00000098061, ENSMUSG00000106716 59 0.833 - - - - 0.833 - predicted gene, 26945 [Source:MGI Symbol;Acc:MGI:5504060]
19. Lrrc2 ENSMUSG00000032495 179 0.833 - - - - 0.833 - leucine rich repeat containing 2 [Source:MGI Symbol;Acc:MGI:1921499]
20. Slc45a3 ENSMUSG00000026435 85 0.832 - - - - 0.832 - solute carrier family 45, member 3 [Source:MGI Symbol;Acc:MGI:1922082]
21. Acot8 ENSMUSG00000017307 64 0.832 - - - - 0.832 - acyl-CoA thioesterase 8 [Source:MGI Symbol;Acc:MGI:2158201]
22. Tbpl2 ENSMUSG00000061809 24 0.832 - - - - 0.832 - TATA box binding protein like 2 [Source:MGI Symbol;Acc:MGI:2684058]
23. Pde11a ENSMUSG00000075270 109 0.831 - - - - 0.831 - phosphodiesterase 11A [Source:MGI Symbol;Acc:MGI:3036251]
24. Zfp879 ENSMUSG00000044296 77 0.831 - - - - 0.831 - zinc finger protein 879 [Source:MGI Symbol;Acc:MGI:3053099]
25. Gdf2 ENSMUSG00000072625 45 0.831 - - - - 0.831 - growth differentiation factor 2 [Source:MGI Symbol;Acc:MGI:1321394]
26. Cdk3-ps ENSMUSG00000092300 149 0.83 - - - - 0.830 - cyclin-dependent kinase 3, pseudogene [Source:MGI Symbol;Acc:MGI:1916931]
27. Rpl27-ps2 ENSMUSG00000082171 89 0.83 - - - - 0.830 - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
28. Hdhd3 ENSMUSG00000038422 78 0.829 - - - - 0.829 - haloacid dehalogenase-like hydrolase domain containing 3 [Source:MGI Symbol;Acc:MGI:1919998]
29. Gm10248 ENSMUSG00000068680 65 0.828 - - - - 0.828 - predicted gene 10248 [Source:MGI Symbol;Acc:MGI:3641931]
30. Anxa1 ENSMUSG00000024659 60 0.827 - - - - 0.827 - annexin A1 [Source:MGI Symbol;Acc:MGI:96819]
31. 0610031J06Rik 0610031J06Rik 942 0.827 - - - - 0.827 -
32. St3gal6 ENSMUSG00000022747 332 0.827 - - - - 0.827 - ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:1888707]
33. Fstl4 ENSMUSG00000036264 74 0.825 - - - - 0.825 - follistatin-like 4 [Source:MGI Symbol;Acc:MGI:2443199]
34. Parp12 ENSMUSG00000038507 133 0.825 - - - - 0.825 - poly (ADP-ribose) polymerase family, member 12 [Source:MGI Symbol;Acc:MGI:2143990]
35. Camk2a ENSMUSG00000024617 134 0.824 - - - - 0.824 - calcium/calmodulin-dependent protein kinase II alpha [Source:MGI Symbol;Acc:MGI:88256]
36. Ccdc101 Ccdc101 634 0.824 - - - - 0.824 -
37. Sgtb ENSMUSG00000042743 242 0.823 - - - - 0.823 - small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta [Source:MGI Symbol;Acc:MGI:2444615]
38. Hist1h1b ENSMUSG00000058773 461 0.823 - - - - 0.823 - histone cluster 1, H1b [Source:MGI Symbol;Acc:MGI:1861461]
39. Cdkn2c ENSMUSG00000028551 153 0.823 - - - - 0.823 - cyclin dependent kinase inhibitor 2C [Source:MGI Symbol;Acc:MGI:105388]
40. Tbc1d24 ENSMUSG00000036473 982 0.823 - - - - 0.823 - TBC1 domain family, member 24 [Source:MGI Symbol;Acc:MGI:2443456]
41. Hint2 ENSMUSG00000028470 624 0.823 - - - - 0.823 - histidine triad nucleotide binding protein 2 [Source:MGI Symbol;Acc:MGI:1916167]
42. Alkbh4 ENSMUSG00000039754 367 0.819 - - - - 0.819 - alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
43. Papss2 ENSMUSG00000024899 76 0.819 - - - - 0.819 - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:MGI Symbol;Acc:MGI:1330223]
44. Tfb2m ENSMUSG00000026492 253 0.818 - - - - 0.818 - transcription factor B2, mitochondrial [Source:MGI Symbol;Acc:MGI:107937]
45. Asl ENSMUSG00000025533 275 0.818 - - - - 0.818 - argininosuccinate lyase [Source:MGI Symbol;Acc:MGI:88084]
46. Rusc2 ENSMUSG00000035969 228 0.817 - - - - 0.817 - RUN and SH3 domain containing 2 [Source:MGI Symbol;Acc:MGI:2140371]
47. Hmga1-rs1 178 0.816 - - - - 0.816 - high mobility group AT-hook I, related sequence 1, transcript variant 2
48. D330023K18Rik ENSMUSG00000087269 112 0.816 - - - - 0.816 - RIKEN cDNA D330023K18 gene [Source:MGI Symbol;Acc:MGI:2445152]
49. Stk38l ENSMUSG00000001630 464 0.815 - - - - 0.815 - serine/threonine kinase 38 like [Source:MGI Symbol;Acc:MGI:1922250]
50. Krt5 ENSMUSG00000061527 105 0.815 - - - - 0.815 - keratin 5 [Source:MGI Symbol;Acc:MGI:96702]
51. Zfp809 ENSMUSG00000057982 230 0.813 - - - - 0.813 - zinc finger protein 809 [Source:MGI Symbol;Acc:MGI:2143362]
52. Tbkbp1 ENSMUSG00000038517 478 0.813 - - - - 0.813 - TBK1 binding protein 1 [Source:MGI Symbol;Acc:MGI:1920424]
53. Cd53 ENSMUSG00000040747 270 0.81 - - - - 0.810 - CD53 antigen [Source:MGI Symbol;Acc:MGI:88341]
54. Akr1c12 ENSMUSG00000021211 55 0.81 - - - - 0.810 - aldo-keto reductase family 1, member C12 [Source:MGI Symbol;Acc:MGI:1351661]
55. A830010M20Rik 4256 0.81 - - - - 0.810 - RIKEN cDNA A830010M20 gene, transcript variant 2
56. Sec61g ENSMUSG00000078974 132 0.809 - - - - 0.809 - SEC61, gamma subunit [Source:MGI Symbol;Acc:MGI:1202066]
57. Ube2s ENSMUSG00000060860 727 0.807 - - - - 0.807 - ubiquitin-conjugating enzyme E2S [Source:MGI Symbol;Acc:MGI:1925141]
58. Tle6 ENSMUSG00000034758 116 0.807 - - - - 0.807 - transducin-like enhancer of split 6 [Source:MGI Symbol;Acc:MGI:2149593]
59. Cacna1h ENSMUSG00000024112 564 0.807 - - - - 0.807 - calcium channel, voltage-dependent, T type, alpha 1H subunit [Source:MGI Symbol;Acc:MGI:1928842]
60. Rnf130 ENSMUSG00000020376 530 0.807 - - - - 0.807 - ring finger protein 130 [Source:MGI Symbol;Acc:MGI:1891717]
61. Kif3c ENSMUSG00000020668 207 0.807 - - - - 0.807 - kinesin family member 3C [Source:MGI Symbol;Acc:MGI:107979]
62. Plek ENSMUSG00000020120 288 0.806 - - - - 0.806 - pleckstrin [Source:MGI Symbol;Acc:MGI:1860485]
63. Ctss ENSMUSG00000038642 159 0.806 - - - - 0.806 - cathepsin S [Source:MGI Symbol;Acc:MGI:107341]
64. Pced1a ENSMUSG00000037773 574 0.805 - - - - 0.805 - PC-esterase domain containing 1A [Source:MGI Symbol;Acc:MGI:2442177]
65. Hsbp1l1 ENSMUSG00000078963 61 0.805 - - - - 0.805 - heat shock factor binding protein 1-like 1 [Source:MGI Symbol;Acc:MGI:1913505]
66. Kat2b ENSMUSG00000000708 252 0.805 - - - - 0.805 - K(lysine) acetyltransferase 2B [Source:MGI Symbol;Acc:MGI:1343094]
67. Trabd ENSMUSG00000015363 770 0.805 - - - - 0.805 - TraB domain containing [Source:MGI Symbol;Acc:MGI:1915226]
68. Palm3 ENSMUSG00000047986 496 0.804 - - - - 0.804 - paralemmin 3 [Source:MGI Symbol;Acc:MGI:1921587]
69. Tfip11 ENSMUSG00000029345 399 0.803 - - - - 0.803 - tuftelin interacting protein 11 [Source:MGI Symbol;Acc:MGI:1930075]
70. Gm5564 ENSMUSG00000046440 1065 0.803 - - - - 0.803 - predicted gene 5564 [Source:MGI Symbol;Acc:MGI:3645018]
71. Zfp13 ENSMUSG00000062012 261 0.802 - - - - 0.802 - zinc finger protein 13 [Source:MGI Symbol;Acc:MGI:99159]
72. BC026590 BC026590 1204 0.8 - - - - 0.800 -
73. Dimt1 ENSMUSG00000021692 607 0.798 - - - - 0.798 - DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913504]
74. Nudt13 ENSMUSG00000021809 261 0.798 - - - - 0.798 - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:MGI Symbol;Acc:MGI:1914975]
75. Mtmr10 ENSMUSG00000030522 476 0.798 - - - - 0.798 - myotubularin related protein 10 [Source:MGI Symbol;Acc:MGI:2142292]
76. Gm10718 ENSMUSG00000095186 877 0.798 - - - - 0.798 - predicted gene 10718 [Source:MGI Symbol;Acc:MGI:3642028]
77. Tmem159 ENSMUSG00000030917 409 0.797 - - - - 0.797 - transmembrane protein 159 [Source:MGI Symbol;Acc:MGI:1925752]
78. Nkiras1 ENSMUSG00000021772 436 0.797 - - - - 0.797 - NFKB inhibitor interacting Ras-like protein 1 [Source:MGI Symbol;Acc:MGI:1916971]
79. Col8a2 ENSMUSG00000056174 221 0.795 - - - - 0.795 - collagen, type VIII, alpha 2 [Source:MGI Symbol;Acc:MGI:88464]
80. Galt ENSMUSG00000036073 471 0.795 - - - - 0.795 - galactose-1-phosphate uridyl transferase [Source:MGI Symbol;Acc:MGI:95638]
81. Dnajc19 ENSMUSG00000027679 1523 0.795 - - - - 0.795 - DnaJ heat shock protein family (Hsp40) member C19 [Source:MGI Symbol;Acc:MGI:1914963]
82. Ccbe1 ENSMUSG00000046318 722 0.793 - - - - 0.793 - collagen and calcium binding EGF domains 1 [Source:MGI Symbol;Acc:MGI:2445053]
83. Dpf3 ENSMUSG00000021221 210 0.793 - - - - 0.793 - D4, zinc and double PHD fingers, family 3 [Source:MGI Symbol;Acc:MGI:1917377]
84. Hsd17b4 ENSMUSG00000024507 787 0.793 - - - - 0.793 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:MGI Symbol;Acc:MGI:105089]
85. Zfp768 ENSMUSG00000047371 458 0.792 - - - - 0.792 - zinc finger protein 768 [Source:MGI Symbol;Acc:MGI:2384582]
86. Zfp239 ENSMUSG00000042097 1245 0.792 - - - - 0.792 - zinc finger protein 239 [Source:MGI Symbol;Acc:MGI:1306812]
87. Fastk ENSMUSG00000028959 464 0.792 - - - - 0.792 - Fas-activated serine/threonine kinase [Source:MGI Symbol;Acc:MGI:1913837]
88. Mogs ENSMUSG00000030036 2072 0.791 - - - - 0.791 - mannosyl-oligosaccharide glucosidase [Source:MGI Symbol;Acc:MGI:1929872]
89. Aldh3a2 ENSMUSG00000010025 557 0.79 - - - - 0.790 - aldehyde dehydrogenase family 3, subfamily A2 [Source:MGI Symbol;Acc:MGI:1353452]
90. Gm12174 ENSMUSG00000080776 570 0.79 - - - - 0.790 - predicted gene 12174 [Source:MGI Symbol;Acc:MGI:3651722]
91. Zfp148 ENSMUSG00000022811 3100 0.79 - - - - 0.790 - zinc finger protein 148 [Source:MGI Symbol;Acc:MGI:1332234]
92. B630019K06Rik ENSMUSG00000052364 523 0.79 - - - - 0.790 - RIKEN cDNA B630019K06 gene [Source:MGI Symbol;Acc:MGI:2147918]
93. 5830462I19Rik ENSMUSG00000091102 512 0.79 - - - - 0.790 - RIKEN cDNA 5830462I19 gene [Source:MGI Symbol;Acc:MGI:3642105]
94. Serpinf2 ENSMUSG00000038224 452 0.789 - - - - 0.789 - serine (or cysteine) peptidase inhibitor, clade F, member 2 [Source:MGI Symbol;Acc:MGI:107173]
95. Slc9a1 ENSMUSG00000028854 438 0.786 - - - - 0.786 - solute carrier family 9 (sodium/hydrogen exchanger), member 1 [Source:MGI Symbol;Acc:MGI:102462]
96. Gm16581 ENSMUSG00000089670 490 0.786 - - - - 0.786 - predicted gene 16581 [Source:MGI Symbol;Acc:MGI:4415001]
97. 4933426M11Rik 4933426M11Rik 441 0.786 - - - - 0.786 -
98. Slc39a8 ENSMUSG00000053897 431 0.786 - - - - 0.786 - solute carrier family 39 (metal ion transporter), member 8 [Source:MGI Symbol;Acc:MGI:1914797]
99. Chchd5 ENSMUSG00000037938 980 0.786 - - - - 0.786 - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:MGI Symbol;Acc:MGI:1913420]
100. Fermt3 ENSMUSG00000024965 174 0.786 - - - - 0.786 - fermitin family member 3 [Source:MGI Symbol;Acc:MGI:2147790]

There are 128 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA