Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ssb

Gene Name Gene ID Reads Annotation
Ssb ENSMUSG00000068882 9373 Sjogren syndrome antigen B [Source:MGI Symbol;Acc:MGI:98423]







Genes with expression patterns similar to Ssb

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ssb ENSMUSG00000068882 9373 6 1.000 1.000 1.000 1.000 1.000 1.000 Sjogren syndrome antigen B [Source:MGI Symbol;Acc:MGI:98423]
2. Nudt5 ENSMUSG00000025817 4257 0.881 - 0.881 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 5 [Source:MGI Symbol;Acc:MGI:1858232]
3. Prtg ENSMUSG00000036030 3403 0.878 - 0.878 - - - - protogenin [Source:MGI Symbol;Acc:MGI:2444710]
4. Pabpc4 ENSMUSG00000011257 4240 0.874 - 0.874 - - - - poly(A) binding protein, cytoplasmic 4 [Source:MGI Symbol;Acc:MGI:2385206]
5. Incenp ENSMUSG00000024660 4668 0.867 - 0.867 - - - - inner centromere protein [Source:MGI Symbol;Acc:MGI:1313288]
6. Grk6 ENSMUSG00000074886 3384 0.867 - 0.867 - - - - G protein-coupled receptor kinase 6 [Source:MGI Symbol;Acc:MGI:1347078]
7. Tmed2 ENSMUSG00000029390 7156 0.862 - 0.862 - - - - transmembrane p24 trafficking protein 2 [Source:MGI Symbol;Acc:MGI:1929269]
8. Rtn3 ENSMUSG00000024758 11055 0.861 - 0.861 - - - - reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]
9. Gm6274 ENSMUSG00000081281 18125 0.853 - 0.853 - - - - predicted gene 6274 [Source:MGI Symbol;Acc:MGI:3645367]
10. Mtdh ENSMUSG00000022255 4882 0.847 - 0.847 - - - - metadherin [Source:MGI Symbol;Acc:MGI:1914404]
11. Cltc ENSMUSG00000047126 26002 0.846 0.846 - - - - - clathrin, heavy polypeptide (Hc) [Source:MGI Symbol;Acc:MGI:2388633]
12. Sucla2 ENSMUSG00000022110 2990 0.843 - 0.843 - - - - succinate-Coenzyme A ligase, ADP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306775]
13. Serf2 ENSMUSG00000074884 3368 0.841 - 0.841 - - - - small EDRK-rich factor 2 [Source:MGI Symbol;Acc:MGI:1337041]
14. Spag9 ENSMUSG00000020859 2554 0.841 - 0.841 - - - - sperm associated antigen 9 [Source:MGI Symbol;Acc:MGI:1918084]
15. Creb1 ENSMUSG00000025958 4907 0.84 - 0.840 - - - - cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
16. Cdh2 ENSMUSG00000024304 2594 0.839 - 0.839 - - - - cadherin 2 [Source:MGI Symbol;Acc:MGI:88355]
17. Arcn1 ENSMUSG00000032096 4777 0.837 - 0.837 - - - - archain 1 [Source:MGI Symbol;Acc:MGI:2387591]
18. Gm20469 Gm20469 2886 0.837 - 0.837 - - - -
19. Srp14 ENSMUSG00000009549 11586 0.836 - 0.836 - - - - signal recognition particle 14 [Source:MGI Symbol;Acc:MGI:107169]
20. Med1 ENSMUSG00000018160 2865 0.835 - 0.835 - - - - mediator complex subunit 1 [Source:MGI Symbol;Acc:MGI:1100846]
21. Prpf3 ENSMUSG00000015748 1936 0.833 - 0.833 - - - - pre-mRNA processing factor 3 [Source:MGI Symbol;Acc:MGI:1918017]
22. Dusp12 ENSMUSG00000026659 2637 0.833 - 0.833 - - - - dual specificity phosphatase 12 [Source:MGI Symbol;Acc:MGI:1890614]
23. Sf3a2 ENSMUSG00000020211 2172 0.832 - 0.832 - - - - splicing factor 3a, subunit 2 [Source:MGI Symbol;Acc:MGI:104912]
24. Letm1 ENSMUSG00000005299 1677 0.831 - 0.831 - - - - leucine zipper-EF-hand containing transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:1932557]
25. Ndc1 ENSMUSG00000028614 5665 0.829 - 0.829 - - - - NDC1 transmembrane nucleoporin [Source:MGI Symbol;Acc:MGI:1920037]
26. Hnrnph3 ENSMUSG00000020069 4233 0.827 0.827 - - - - - heterogeneous nuclear ribonucleoprotein H3 [Source:MGI Symbol;Acc:MGI:1926462]
27. Ppp4r2 ENSMUSG00000052144 4552 0.826 0.826 - - - - - protein phosphatase 4, regulatory subunit 2 [Source:MGI Symbol;Acc:MGI:3027896]
28. 1110001J03Rik 2404 0.825 - 0.825 - - - - RIKEN cDNA 1110001J03 gene
29. Sat1 ENSMUSG00000025283 3421 0.823 - 0.823 - - - - spermidine/spermine N1-acetyl transferase 1 [Source:MGI Symbol;Acc:MGI:98233]
30. Vta1 ENSMUSG00000019868 1987 0.823 - 0.823 - - - - vesicle (multivesicular body) trafficking 1 [Source:MGI Symbol;Acc:MGI:1913451]
31. Csnk1g3 ENSMUSG00000073563 4431 0.821 - 0.821 - - - - casein kinase 1, gamma 3 [Source:MGI Symbol;Acc:MGI:1917675]
32. Rer1 ENSMUSG00000029048 3007 0.82 - 0.820 - - - - retention in endoplasmic reticulum sorting receptor 1 [Source:MGI Symbol;Acc:MGI:1915080]
33. Cabin1 ENSMUSG00000020196 1482 0.82 - 0.820 - - - - calcineurin binding protein 1 [Source:MGI Symbol;Acc:MGI:1298375]
34. Tle1 ENSMUSG00000008305 2915 0.82 - 0.820 - - - - transducin-like enhancer of split 1 [Source:MGI Symbol;Acc:MGI:104636]
35. Ybx3 ENSMUSG00000030189 16551 0.819 - 0.819 - - - - Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]
36. Zfp521 ENSMUSG00000024420 1899 0.819 - 0.819 - - - - zinc finger protein 521 [Source:MGI Symbol;Acc:MGI:95459]
37. Coro1c ENSMUSG00000004530 8028 0.818 - 0.818 - - - - coronin, actin binding protein 1C [Source:MGI Symbol;Acc:MGI:1345964]
38. Sh3pxd2b ENSMUSG00000040711 2383 0.817 - 0.817 - - - - SH3 and PX domains 2B [Source:MGI Symbol;Acc:MGI:2442062]
39. Msantd3 ENSMUSG00000039693 1503 0.817 - 0.817 - - - - Myb/SANT-like DNA-binding domain containing 3 [Source:MGI Symbol;Acc:MGI:1913915]
40. Pole2 ENSMUSG00000020974 1305 0.814 - 0.814 - - - - polymerase (DNA directed), epsilon 2 (p59 subunit) [Source:MGI Symbol;Acc:MGI:1197514]
41. Faf1 ENSMUSG00000010517 1671 0.813 - 0.813 - - - - Fas-associated factor 1 [Source:MGI Symbol;Acc:MGI:109419]
42. Sec23a ENSMUSG00000020986 2929 0.812 - 0.812 - - - - SEC23 homolog A, COPII coat complex component [Source:MGI Symbol;Acc:MGI:1349635]
43. Lmo4 ENSMUSG00000028266 10064 0.81 0.810 - - - - - LIM domain only 4 [Source:MGI Symbol;Acc:MGI:109360]
44. Rpl17-ps4 ENSMUSG00000084345 1689 0.809 - 0.809 - - - - ribosomal protein L17, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3651043]
45. Ppp6r3 ENSMUSG00000024908 4031 0.809 - 0.809 - - - - protein phosphatase 6, regulatory subunit 3 [Source:MGI Symbol;Acc:MGI:1921807]
46. Laptm4b ENSMUSG00000022257 3779 0.809 - 0.809 - - - - lysosomal-associated protein transmembrane 4B [Source:MGI Symbol;Acc:MGI:1890494]
47. Trmt1 ENSMUSG00000001909 1649 0.809 - 0.809 - - - - tRNA methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1289155]
48. Golga7 ENSMUSG00000015341 4741 0.808 - 0.808 - - - - golgi autoantigen, golgin subfamily a, 7 [Source:MGI Symbol;Acc:MGI:1931029]
49. Ilkap ENSMUSG00000026309 2636 0.807 - 0.807 - - - - integrin-linked kinase-associated serine/threonine phosphatase 2C [Source:MGI Symbol;Acc:MGI:1914694]
50. Phc1 ENSMUSG00000040669 1898 0.805 - 0.805 - - - - polyhomeotic 1 [Source:MGI Symbol;Acc:MGI:103248]
51. Efnb1 ENSMUSG00000031217 2777 0.804 - 0.804 - - - - ephrin B1 [Source:MGI Symbol;Acc:MGI:102708]
52. Ap2b1 ENSMUSG00000035152 2023 0.804 - 0.804 - - - - adaptor-related protein complex 2, beta 1 subunit [Source:MGI Symbol;Acc:MGI:1919020]
53. Ppa1 ENSMUSG00000020089 6041 0.804 - 0.804 - - - - pyrophosphatase (inorganic) 1 [Source:MGI Symbol;Acc:MGI:97831]
54. Igf2bp1 ENSMUSG00000013415 11515 0.804 - 0.804 - - - - insulin-like growth factor 2 mRNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1890357]
55. Dennd2a ENSMUSG00000038456 2005 0.804 - 0.804 - - - - DENN/MADD domain containing 2A [Source:MGI Symbol;Acc:MGI:2444961]
56. Dicer1 ENSMUSG00000041415 5216 0.803 - 0.803 - - - - dicer 1, ribonuclease type III [Source:MGI Symbol;Acc:MGI:2177178]
57. Oxct1 ENSMUSG00000022186 5910 0.803 - 0.803 - - - - 3-oxoacid CoA transferase 1 [Source:MGI Symbol;Acc:MGI:1914291]
58. Med18 ENSMUSG00000066042 841 0.802 - 0.802 - - - - mediator complex subunit 18 [Source:MGI Symbol;Acc:MGI:1914469]
59. Spast ENSMUSG00000024068 2727 0.802 - 0.802 - - - - spastin [Source:MGI Symbol;Acc:MGI:1858896]
60. Pja2 ENSMUSG00000024083 7200 0.802 - 0.802 - - - - praja ring finger ubiquitin ligase 2 [Source:MGI Symbol;Acc:MGI:2159342]
61. Pcca ENSMUSG00000041650 1407 0.801 - 0.801 - - - - propionyl-Coenzyme A carboxylase, alpha polypeptide [Source:MGI Symbol;Acc:MGI:97499]
62. Kdm3b ENSMUSG00000038773 1607 0.8 - 0.800 - - - - KDM3B lysine (K)-specific demethylase 3B [Source:MGI Symbol;Acc:MGI:1923356]
63. Rpl27a ENSMUSG00000046364 2278 0.8 - 0.800 - - - - ribosomal protein L27A [Source:MGI Symbol;Acc:MGI:1347076]
64. Psma6 ENSMUSG00000021024 3072 0.798 - 0.798 - - - - proteasome (prosome, macropain) subunit, alpha type 6 [Source:MGI Symbol;Acc:MGI:1347006]
65. Rbm8a ENSMUSG00000038374 9615 0.798 - 0.798 - - - - RNA binding motif protein 8a [Source:MGI Symbol;Acc:MGI:1913129]
66. Rbbp6 ENSMUSG00000030779 8007 0.797 0.797 - - - - - retinoblastoma binding protein 6, ubiquitin ligase [Source:MGI Symbol;Acc:MGI:894835]
67. 5830417I10Rik ENSMUSG00000078684 1748 0.797 - 0.797 - - - - RIKEN cDNA 5830417I10 gene [Source:MGI Symbol;Acc:MGI:1923272]
68. Snrpd3 ENSMUSG00000020180 2205 0.796 - 0.796 - - - - small nuclear ribonucleoprotein D3 [Source:MGI Symbol;Acc:MGI:1914582]
69. Zfand5 ENSMUSG00000024750 6972 0.795 - 0.795 - - - - zinc finger, AN1-type domain 5 [Source:MGI Symbol;Acc:MGI:1278334]
70. Psmb1 ENSMUSG00000014769 7153 0.795 - 0.795 - - - - proteasome (prosome, macropain) subunit, beta type 1 [Source:MGI Symbol;Acc:MGI:104884]
71. Nsg2 ENSMUSG00000020297 1718 0.794 - 0.794 - - - - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
72. Parg ENSMUSG00000021911 1715 0.794 - 0.794 - - - - poly (ADP-ribose) glycohydrolase [Source:MGI Symbol;Acc:MGI:1347094]
73. Rpn1 ENSMUSG00000030062 7082 0.794 - 0.794 - - - - ribophorin I [Source:MGI Symbol;Acc:MGI:98084]
74. Dnm2 ENSMUSG00000033335 1247 0.793 - 0.793 - - - - dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]
75. Arhgap28 ENSMUSG00000024043 3995 0.791 - 0.791 - - - - Rho GTPase activating protein 28 [Source:MGI Symbol;Acc:MGI:2147003]
76. Ssx2ip ENSMUSG00000036825 1609 0.791 - 0.791 - - - - synovial sarcoma, X 2 interacting protein [Source:MGI Symbol;Acc:MGI:2139150]
77. Hibch ENSMUSG00000041426 755 0.79 - 0.790 - - - - 3-hydroxyisobutyryl-Coenzyme A hydrolase [Source:MGI Symbol;Acc:MGI:1923792]
78. Six1 ENSMUSG00000051367 745 0.79 - 0.790 - - - - sine oculis-related homeobox 1 [Source:MGI Symbol;Acc:MGI:102780]
79. Wbp1 ENSMUSG00000030035 3480 0.789 - 0.789 - - - - WW domain binding protein 1 [Source:MGI Symbol;Acc:MGI:104710]
80. Ruvbl1 ENSMUSG00000030079 2700 0.788 - 0.788 - - - - RuvB-like protein 1 [Source:MGI Symbol;Acc:MGI:1928760]
81. Trmt6 ENSMUSG00000037376 1746 0.788 - 0.788 - - - - tRNA methyltransferase 6 [Source:MGI Symbol;Acc:MGI:1914176]
82. AU022252 ENSMUSG00000078584 3752 0.788 - 0.788 - - - - expressed sequence AU022252 [Source:MGI Symbol;Acc:MGI:2140466]
83. 1110001A16Rik 1110001A16Rik 806 0.785 - 0.785 - - - -
84. Wipi1 ENSMUSG00000041895 3789 0.783 - 0.783 - - - - WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
85. Cdk5r1 ENSMUSG00000048895 2376 0.783 - 0.783 - - - - cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
86. Gemin2 ENSMUSG00000060121 858 0.783 - 0.783 - - - - gem nuclear organelle associated protein 2 [Source:MGI Symbol;Acc:MGI:1913853]
87. Gnb2 ENSMUSG00000029713 2747 0.783 - 0.783 - - - - guanine nucleotide binding protein (G protein), beta 2 [Source:MGI Symbol;Acc:MGI:95784]
88. Golga3 ENSMUSG00000029502 800 0.782 - 0.782 - - - - golgi autoantigen, golgin subfamily a, 3 [Source:MGI Symbol;Acc:MGI:96958]
89. Itpkb ENSMUSG00000038855 1257 0.782 - 0.782 - - - - inositol 1,4,5-trisphosphate 3-kinase B [Source:MGI Symbol;Acc:MGI:109235]
90. Card10 ENSMUSG00000033170 832 0.781 - 0.781 - - - - caspase recruitment domain family, member 10 [Source:MGI Symbol;Acc:MGI:2146012]
91. Dbnl ENSMUSG00000020476 1845 0.78 - 0.780 - - - - drebrin-like [Source:MGI Symbol;Acc:MGI:700006]
92. Nsmce2 ENSMUSG00000059586 2346 0.779 - 0.779 - - - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:MGI Symbol;Acc:MGI:1915751]
93. Zc3h7a ENSMUSG00000037965 1775 0.779 - 0.779 - - - - zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
94. Srd5a3 ENSMUSG00000029233 1029 0.779 - 0.779 - - - - steroid 5 alpha-reductase 3 [Source:MGI Symbol;Acc:MGI:1930252]
95. Pomp ENSMUSG00000029649 9539 0.779 - 0.779 - - - - proteasome maturation protein [Source:MGI Symbol;Acc:MGI:1913787]
96. Cnih4 ENSMUSG00000062169 2354 0.778 - 0.778 - - - - cornichon family AMPA receptor auxiliary protein 4 [Source:MGI Symbol;Acc:MGI:1925828]
97. Tpgs1 ENSMUSG00000020308 948 0.777 - 0.777 - - - - tubulin polyglutamylase complex subunit 1 [Source:MGI Symbol;Acc:MGI:106618]
98. Gm16378 ENSMUSG00000095762 683 0.777 - 0.777 - - - - predicted gene 16378 [Source:MGI Symbol;Acc:MGI:3646886]
99. Ccnd3 ENSMUSG00000034165 817 0.777 - 0.777 - - - - cyclin D3 [Source:MGI Symbol;Acc:MGI:88315]
100. 1700093K21Rik ENSMUSG00000020286 497 0.777 - 0.777 - - - - RIKEN cDNA 1700093K21 gene [Source:MGI Symbol;Acc:MGI:1914608]

There are 126 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA