Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ss18l1

Gene Name Gene ID Reads Annotation
Ss18l1 ENSMUSG00000039086 356 SS18, nBAF chromatin remodeling complex subunit like 1 [Source:MGI Symbol;Acc:MGI:2444061]







Genes with expression patterns similar to Ss18l1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ss18l1 ENSMUSG00000039086 356 6 1.000 1.000 1.000 1.000 1.000 1.000 SS18, nBAF chromatin remodeling complex subunit like 1 [Source:MGI Symbol;Acc:MGI:2444061]
2. E130311K13Rik ENSMUSG00000048581 4352 0.847 - - - 0.847 - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
3. Rps18-ps3 ENSMUSG00000057657 245 0.84 - - - 0.840 - - ribosomal protein S18, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3642474]
4. Rnf183 ENSMUSG00000063851 14 0.835 - - - 0.835 - - ring finger protein 183 [Source:MGI Symbol;Acc:MGI:1923322]
5. Gm26603 ENSMUSG00000097857 20 0.835 - - - 0.835 - - predicted gene, 26603 [Source:MGI Symbol;Acc:MGI:5477097]
6. Gm3712 ENSMUSG00000082371 14 0.835 - - - 0.835 - - predicted gene 3712 [Source:MGI Symbol;Acc:MGI:3781888]
7. Dbpht2 ENSMUSG00000029878 15 0.835 - - - 0.835 - - DNA binding protein with his-thr domain [Source:MGI Symbol;Acc:MGI:2679513]
8. Trib3 ENSMUSG00000032715 37 0.834 - - - 0.834 - - tribbles pseudokinase 3 [Source:MGI Symbol;Acc:MGI:1345675]
9. Nap1l2 ENSMUSG00000082229 315 0.833 - - 0.833 - - - nucleosome assembly protein 1-like 2 [Source:MGI Symbol;Acc:MGI:106654]
10. Oxsm ENSMUSG00000021786 115 0.831 - - - 0.831 - - 3-oxoacyl-ACP synthase, mitochondrial [Source:MGI Symbol;Acc:MGI:1918397]
11. Dytn ENSMUSG00000069085 45 0.83 - - - - 0.830 - dystrotelin [Source:MGI Symbol;Acc:MGI:2685061]
12. A730045E13Rik ENSMUSG00000053979 16 0.83 - - - 0.830 - - RIKEN cDNA A730045E13 gene [Source:MGI Symbol;Acc:MGI:2685430]
13. Star ENSMUSG00000031574 42 0.83 - - - 0.830 - - steroidogenic acute regulatory protein [Source:MGI Symbol;Acc:MGI:102760]
14. Ano2 ENSMUSG00000038115 19 0.828 - - - 0.828 - - anoctamin 2 [Source:MGI Symbol;Acc:MGI:2387214]
15. Lgr6 ENSMUSG00000042793 34 0.827 - - - 0.827 - - leucine-rich repeat-containing G protein-coupled receptor 6 [Source:MGI Symbol;Acc:MGI:2441805]
16. Oraov1 ENSMUSG00000031072 415 0.827 - - - 0.827 - - oral cancer overexpressed 1 [Source:MGI Symbol;Acc:MGI:1919534]
17. Pramef17 ENSMUSG00000078509 32 0.826 - - - 0.826 - - PRAME family member 17 [Source:MGI Symbol;Acc:MGI:3650199]
18. Rab25 ENSMUSG00000008601 104 0.826 - - - 0.826 - - RAB25, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858203]
19. Bcmo1 Bcmo1 44 0.825 - - - 0.825 - -
20. Gm15952 ENSMUSG00000085655 100 0.823 - - - 0.823 - - predicted gene 15952 [Source:MGI Symbol;Acc:MGI:3802149]
21. Gpr161 ENSMUSG00000040836 49 0.821 - - - 0.821 - - G protein-coupled receptor 161 [Source:MGI Symbol;Acc:MGI:2685054]
22. Cdk18 ENSMUSG00000026437 118 0.821 - - - 0.821 - - cyclin-dependent kinase 18 [Source:MGI Symbol;Acc:MGI:97518]
23. Rps13 ENSMUSG00000090862 73 0.819 - - - 0.819 - - ribosomal protein S13 [Source:MGI Symbol;Acc:MGI:1915302]
24. 4933427J07Rik ENSMUSG00000087267 104 0.819 - - - 0.819 - - RIKEN cDNA 4933427J07 gene [Source:MGI Symbol;Acc:MGI:1918470]
25. Efcab12 ENSMUSG00000030321 63 0.814 - - - 0.814 - - EF-hand calcium binding domain 12 [Source:MGI Symbol;Acc:MGI:2681834]
26. Veph1 ENSMUSG00000027831 101 0.812 - - - 0.812 - - ventricular zone expressed PH domain-containing 1 [Source:MGI Symbol;Acc:MGI:1920039]
27. Rmdn2 ENSMUSG00000036368 115 0.81 - - - 0.810 - - regulator of microtubule dynamics 2 [Source:MGI Symbol;Acc:MGI:2147043]
28. Synm ENSMUSG00000030554 90 0.81 - - - 0.810 - - synemin, intermediate filament protein [Source:MGI Symbol;Acc:MGI:2661187]
29. Hist1h2ab ENSMUSG00000061615 94 0.81 - - - 0.810 - - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
30. Zfp748 ENSMUSG00000095432 393 0.806 - - - 0.806 - - zinc finger protein 748 [Source:MGI Symbol;Acc:MGI:1916455]
31. G430049J08Rik ENSMUSG00000096528 73 0.806 - - - - 0.806 - RIKEN cDNA G430049J08 gene [Source:MGI Symbol;Acc:MGI:3645649]
32. Fbxo27 ENSMUSG00000037463 111 0.806 - - - 0.806 - - F-box protein 27 [Source:MGI Symbol;Acc:MGI:2685007]
33. Shank2 ENSMUSG00000037541 127 0.805 - - - - 0.805 - SH3 and multiple ankyrin repeat domains 2 [Source:MGI Symbol;Acc:MGI:2671987]
34. 9930012K11Rik ENSMUSG00000044551 128 0.805 - - - - 0.805 - RIKEN cDNA 9930012K11 gene [Source:MGI Symbol;Acc:MGI:2145726]
35. Rbm43 ENSMUSG00000036249 142 0.803 - - - 0.803 - - RNA binding motif protein 43 [Source:MGI Symbol;Acc:MGI:1918934]
36. Lins Lins 913 0.802 - - - 0.802 - -
37. Car5b ENSMUSG00000031373 107 0.802 - - - 0.802 - - carbonic anhydrase 5b, mitochondrial [Source:MGI Symbol;Acc:MGI:1926249]
38. Camk1d ENSMUSG00000039145 117 0.8 - - - 0.800 - - calcium/calmodulin-dependent protein kinase ID [Source:MGI Symbol;Acc:MGI:2442190]
39. Letm2 ENSMUSG00000037363 105 0.8 - - - 0.800 - - leucine zipper-EF-hand containing transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:2444979]
40. Gm10086 ENSMUSG00000060730 2124 0.8 - - - 0.800 - - predicted pseudogene 10086 [Source:MGI Symbol;Acc:MGI:3642342]
41. Neil2 ENSMUSG00000035121 342 0.8 - - - 0.800 - - nei like 2 (E. coli) [Source:MGI Symbol;Acc:MGI:2686058]
42. Gm15708 ENSMUSG00000086894 110 0.799 - - - 0.799 - - predicted gene 15708 [Source:MGI Symbol;Acc:MGI:3783149]
43. Gm13771 ENSMUSG00000083832 132 0.798 - - - 0.798 - - predicted gene 13771 [Source:MGI Symbol;Acc:MGI:3650181]
44. Ccm2l ENSMUSG00000027474 175 0.797 - - - 0.797 - - cerebral cavernous malformation 2-like [Source:MGI Symbol;Acc:MGI:2385159]
45. Bdh1 ENSMUSG00000046598 358 0.797 - - 0.797 - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:MGI Symbol;Acc:MGI:1919161]
46. Cntn1 ENSMUSG00000055022 89 0.795 - - - 0.795 - - contactin 1 [Source:MGI Symbol;Acc:MGI:105980]
47. Siae ENSMUSG00000001942 223 0.793 - - - - 0.793 - sialic acid acetylesterase [Source:MGI Symbol;Acc:MGI:104803]
48. Tubd1 ENSMUSG00000020513 118 0.791 - - - 0.791 - - tubulin, delta 1 [Source:MGI Symbol;Acc:MGI:1891826]
49. Chst11 ENSMUSG00000034612 241 0.79 - - - 0.790 - - carbohydrate sulfotransferase 11 [Source:MGI Symbol;Acc:MGI:1927166]
50. Abtb2 ENSMUSG00000032724 647 0.79 - - - 0.790 - - ankyrin repeat and BTB (POZ) domain containing 2 [Source:MGI Symbol;Acc:MGI:2139365]
51. Rfx8 ENSMUSG00000057173 12 0.79 - - - - 0.790 - regulatory factor X 8 [Source:MGI Symbol;Acc:MGI:3588206]
52. Alkbh6 ENSMUSG00000042831 746 0.79 - - - 0.790 - - alkB homolog 6 [Source:MGI Symbol;Acc:MGI:2142037]
53. BC002163 ENSMUSG00000081824 561 0.789 - - - 0.789 - - cDNA sequence BC002163 [Source:MGI Symbol;Acc:MGI:3612445]
54. Ptger4 ENSMUSG00000039942 133 0.788 - - - 0.788 - - prostaglandin E receptor 4 (subtype EP4) [Source:MGI Symbol;Acc:MGI:104311]
55. Gm5431 ENSMUSG00000058163, ENSMUSG00000116032, ENSMUSG00000116047 10 0.787 - - - - 0.787 - predicted gene 5431 [Source:NCBI gene;Acc:432555]
56. Cmtm2a ENSMUSG00000074127 8 0.787 - - - - 0.787 - CKLF-like MARVEL transmembrane domain containing 2A [Source:MGI Symbol;Acc:MGI:2447160]
57. Gm26585 ENSMUSG00000097473 8 0.787 - - - - 0.787 - predicted gene, 26585 [Source:MGI Symbol;Acc:MGI:5477079]
58. Gm14542 ENSMUSG00000081220 10 0.787 - - - - 0.787 - predicted gene 14542 [Source:MGI Symbol;Acc:MGI:3705745]
59. Asic5 ENSMUSG00000028008 7 0.787 - - - - 0.787 - acid-sensing (proton-gated) ion channel family member 5 [Source:MGI Symbol;Acc:MGI:1929259]
60. Lrrc7 ENSMUSG00000028176 10 0.787 - - - - 0.787 - leucine rich repeat containing 7 [Source:MGI Symbol;Acc:MGI:2676665]
61. Gm8420 ENSMUSG00000072324 22 0.786 - - - - 0.786 - predicted gene 8420 [Source:MGI Symbol;Acc:MGI:3645594]
62. Saal1 ENSMUSG00000006763 2057 0.785 - - - 0.785 - - serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
63. Map7 ENSMUSG00000019996 135 0.784 - - - 0.784 - - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
64. Rhbdl2 ENSMUSG00000043333 22 0.782 - - - - 0.782 - rhomboid like 2 [Source:MGI Symbol;Acc:MGI:3608413]
65. Treml2 ENSMUSG00000071068, ENSMUSG00000116153 85 0.782 - - - - 0.782 - triggering receptor expressed on myeloid cells-like 2 [Source:MGI Symbol;Acc:MGI:2147038]
66. Ttc6 ENSMUSG00000046782 54 0.782 - - - - 0.782 - tetratricopeptide repeat domain 6 [Source:MGI Symbol;Acc:MGI:2684915]
67. Sema4a ENSMUSG00000028064 151 0.781 - - - 0.781 - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A [Source:MGI Symbol;Acc:MGI:107560]
68. Kbtbd8 ENSMUSG00000030031 184 0.78 - - - 0.780 - - kelch repeat and BTB (POZ) domain containing 8 [Source:MGI Symbol;Acc:MGI:2661430]
69. Ggn ENSMUSG00000031493 13 0.779 - - - - 0.779 - gametogenetin [Source:MGI Symbol;Acc:MGI:2181461]
70. Gm10093 ENSMUSG00000061062 597 0.779 - - - 0.779 - - predicted pseudogene 10093 [Source:MGI Symbol;Acc:MGI:3704479]
71. Proca1 ENSMUSG00000044122 39 0.778 - - - - 0.778 - protein interacting with cyclin A1 [Source:MGI Symbol;Acc:MGI:1918274]
72. Gm22265 ENSMUSG00000094131 12 0.776 - - - - 0.776 - predicted gene, 22265 [Source:MGI Symbol;Acc:MGI:5452042]
73. Ppp1r13b ENSMUSG00000021285 299 0.775 - - - 0.775 - - protein phosphatase 1, regulatory subunit 13B [Source:MGI Symbol;Acc:MGI:1336199]
74. Gm9320 ENSMUSG00000100865 12 0.774 - - - - 0.774 - predicted gene 9320 [Source:MGI Symbol;Acc:MGI:3645000]
75. Gm24616 ENSMUSG00000065208 48 0.774 - - - - 0.774 - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
76. Ptbp2 ENSMUSG00000028134 3052 0.774 - - 0.774 - - - polypyrimidine tract binding protein 2 [Source:MGI Symbol;Acc:MGI:1860489]
77. Ranbp17 ENSMUSG00000040594 358 0.774 - - - 0.774 - - RAN binding protein 17 [Source:MGI Symbol;Acc:MGI:1929706]
78. Ostm1 ENSMUSG00000038280 208 0.773 - - - 0.773 - - osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
79. Psmc1 ENSMUSG00000021178 7395 0.773 - - - 0.773 - - protease (prosome, macropain) 26S subunit, ATPase 1 [Source:MGI Symbol;Acc:MGI:106054]
80. Gm12469 ENSMUSG00000083624 31 0.772 - - - - 0.772 - predicted gene 12469 [Source:MGI Symbol;Acc:MGI:3652114]
81. Rnaseh2c ENSMUSG00000024925 2015 0.772 - - 0.772 - - - ribonuclease H2, subunit C [Source:MGI Symbol;Acc:MGI:1915459]
82. Hist2h2bb ENSMUSG00000105827 20 0.771 - - - - 0.771 - histone cluster 2, H2bb [Source:MGI Symbol;Acc:MGI:2448413]
83. B3galt6 ENSMUSG00000050796 745 0.771 - - 0.771 - - - UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6 [Source:MGI Symbol;Acc:MGI:2152819]
84. St8sia6 ENSMUSG00000003418 61 0.77 - - - - 0.770 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:2386797]
85. Polg2 ENSMUSG00000020718 273 0.77 - - - 0.770 - - polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
86. Gm12992 ENSMUSG00000085667 38 0.769 - - - - 0.769 - predicted gene 12992 [Source:MGI Symbol;Acc:MGI:3702644]
87. Rassf6 ENSMUSG00000029370 22 0.769 - - - - 0.769 - Ras association (RalGDS/AF-6) domain family member 6 [Source:MGI Symbol;Acc:MGI:1920496]
88. Ttc25 ENSMUSG00000006784 28 0.769 - - - - 0.769 - tetratricopeptide repeat domain 25 [Source:MGI Symbol;Acc:MGI:1921657]
89. 1700029I15Rik ENSMUSG00000044916 21 0.769 - - - - 0.769 - RIKEN cDNA 1700029I15 gene [Source:MGI Symbol;Acc:MGI:1916742]
90. Hopx ENSMUSG00000059325 75 0.768 - - - - 0.768 - HOP homeobox [Source:MGI Symbol;Acc:MGI:1916782]
91. Gm15983 ENSMUSG00000087168 103 0.768 - - - - 0.768 - predicted gene 15983 [Source:MGI Symbol;Acc:MGI:3805549]
92. Ms4a4d ENSMUSG00000024678 17 0.768 - - - - 0.768 - membrane-spanning 4-domains, subfamily A, member 4D [Source:MGI Symbol;Acc:MGI:1913857]
93. Znrd1as ENSMUSG00000036214 190 0.767 - - - 0.767 - - zinc ribbon domain containing 1, antisense [Source:MGI Symbol;Acc:MGI:1923666]
94. Atp7b ENSMUSG00000006567 86 0.767 - - - - 0.767 - ATPase, Cu++ transporting, beta polypeptide [Source:MGI Symbol;Acc:MGI:103297]
95. Gm9790 ENSMUSG00000044330 390 0.767 - - - 0.767 - - predicted gene 9790 [Source:MGI Symbol;Acc:MGI:3704221]
96. Izumo2 ENSMUSG00000066500 75 0.766 - - - - 0.766 - IZUMO family member 2 [Source:MGI Symbol;Acc:MGI:1922760]
97. Zfp94 ENSMUSG00000074282 203 0.766 - - 0.766 - - - zinc finger protein 94 [Source:MGI Symbol;Acc:MGI:107610]
98. Col12a1 ENSMUSG00000032332 826 0.765 - - - 0.765 - - collagen, type XII, alpha 1 [Source:MGI Symbol;Acc:MGI:88448]
99. Rpl36-ps3 ENSMUSG00000066629 25 0.765 - - - - 0.765 - ribosomal protein L36, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3642480]
100. 2900076A07Rik ENSMUSG00000097277 202 0.763 - - - - 0.763 - RIKEN cDNA 2900076A07 gene [Source:MGI Symbol;Acc:MGI:1920242]

There are 118 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA